RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 DUX5Q96PT3 197 aa13.24□□□□□ -0.29
SRM-204ENST00000475189 GFI1Q99684 422 aa13.24□□□□□ -0.29
SRM-204ENST00000475189 BANF2Q9H503 90 aa13.24□□□□□ -0.29
SRM-204ENST00000475189 ING3Q9NXR8 418 aa13.24□□□□□ -0.29
SRM-204ENST00000475189 UBE2J1Q9Y385 318 aaPredicted RBP13.24□□□□□ -0.29
SRM-204ENST00000475189 ODAMA1E959 279 aa13.23□□□□□ -0.29
SRM-204ENST00000475189 CCRL2O00421 344 aa13.23□□□□□ -0.29
SRM-204ENST00000475189 IGHV1-8P0DP01 117 aa13.23□□□□□ -0.29
SRM-204ENST00000475189 CALRP27797 417 aaKnown RBP13.23□□□□□ -0.29
SRM-204ENST00000475189 PSMB9P28065 219 aa13.23□□□□□ -0.29
SRM-204ENST00000475189 SAA4P35542 130 aa13.23□□□□□ -0.29
SRM-204ENST00000475189 SLC9A3R2Q15599 337 aa13.23□□□□□ -0.29
SRM-204ENST00000475189 TAF9Q16594 264 aa13.23□□□□□ -0.29
SRM-204ENST00000475189 TRAPPC6BQ86SZ2 158 aa13.23□□□□□ -0.29
SRM-204ENST00000475189 PLPPR1Q8TBJ4 325 aa13.23□□□□□ -0.29
SRM-204ENST00000475189 FAM216AQ8WUB2 273 aa13.23□□□□□ -0.29
SRM-204ENST00000475189 DPCDQ9BVM2 203 aaPredicted RBP13.23□□□□□ -0.29
SRM-204ENST00000475189 GHRLQ9UBU3 117 aa13.23□□□□□ -0.29
SRM-204ENST00000475189 TRGV10A0A0A0MS01 117 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 TRDV1A0A1B0GX56 115 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 CLDN34H7C241 214 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 SLC22A1O15245 554 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 HOXA3O43365 443 aaPredicted RBP13.22□□□□□ -0.29
SRM-204ENST00000475189 CRTAPO75718 401 aaPredicted RBP13.22□□□□□ -0.29
SRM-204ENST00000475189 MMP23AO75900 390 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 MELTFP08582 738 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 UBBP0CG47 229 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 MGMTP16455 207 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 COX7A1P24310 79 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 HTR2CP28335 458 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 KCNJ3P48549 501 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 PAX5Q02548 391 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 ATAD3CQ5T2N8 411 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 RSBN1Q5VWQ0 802 aaPredicted RBP13.22□□□□□ -0.29
SRM-204ENST00000475189 AJUBAQ96IF1 538 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 Q96M66 194 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 BARHL1Q9BZE3 327 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 SELENOIQ9C0D9 397 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 NCOR1P1Q9H4R4 102 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 ZMAT3Q9HA38 289 aaKnown RBP13.22□□□□□ -0.29
SRM-204ENST00000475189 TAS2R3Q9NYW6 316 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 KIF25Q9UIL4 384 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 FAM96BQ9Y3D0 163 aa13.22□□□□□ -0.29
SRM-204ENST00000475189 AK6Q9Y3D8 172 aaKnown RBP13.22□□□□□ -0.29
SRM-204ENST00000475189 MEIOCA2RUB1 952 aa13.21□□□□□ -0.29
SRM-204ENST00000475189 CGB3P0DN86 165 aa13.21□□□□□ -0.29
SRM-204ENST00000475189 CGB7P0DN87 165 aa13.21□□□□□ -0.29
SRM-204ENST00000475189 VSIG8P0DPA2 414 aa13.21□□□□□ -0.29
SRM-204ENST00000475189 MIDNQ504T8 468 aa13.21□□□□□ -0.29
SRM-204ENST00000475189 BRICD5Q6PL45 260 aa13.21□□□□□ -0.29
SRM-204ENST00000475189 LDLRAD3Q86YD5 345 aa13.21□□□□□ -0.29
SRM-204ENST00000475189 OR13D1Q8NGV5 346 aa13.21□□□□□ -0.29
SRM-204ENST00000475189 C17orf50Q8WW18 174 aa13.21□□□□□ -0.29
SRM-204ENST00000475189 SLC25A28Q96A46 364 aa13.21□□□□□ -0.29
SRM-204ENST00000475189 GAL3ST2Q9H3Q3 398 aa13.21□□□□□ -0.29
SRM-204ENST00000475189 RCC2Q9P258 522 aaKnown RBP13.21□□□□□ -0.29
SRM-204ENST00000475189 SESN1Q9Y6P5 492 aa13.21□□□□□ -0.29
SRM-204ENST00000475189 MEIKINA0A087WXM9 373 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 SHISA3A0PJX4 238 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 FAM90A10PA6NDY2 464 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 FAM90A18PA6NE21 464 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 FAM90A16PA6NEW6 464 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 FAM90A20PA6NIJ5 464 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 FAM90A8PA6NJQ4 464 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 FAM90A7PA6NKC0 464 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 FAM90A22PA8MWA6 464 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 FAM90A12PA8MX19 464 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 FAM90A5PA8MXJ8 464 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 FAM90A23PA8MXZ1 464 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 SLC17A2O00624 439 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 CLPXO76031 633 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 RNASE1P07998 156 aaKnown RBP13.2□□□□□ -0.3
SRM-204ENST00000475189 FBP1P09467 338 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 FAM90A15PP0C7V4 464 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 FAM90A13PP0C7W8 464 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 FAM90A14PP0C7W9 464 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 FAM90A24PP0C7X0 464 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 GALP22466 123 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 QRFPP83859 136 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 SYT6Q5T7P8 510 aaPredicted RBP13.2□□□□□ -0.3
SRM-204ENST00000475189 OR10K2Q6IF99 312 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 HEPN1Q6WQI6 88 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 OR6M1Q8NGM8 313 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 OR13A1Q8NGR1 328 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 FAM46BQ96A09 425 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 CST11Q9H112 138 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 KCNK15Q9H427 330 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 SPACA1Q9HBV2 294 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 OR6C3Q9NZP0 311 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 ZNRD1Q9P1U0 126 aa13.2□□□□□ -0.3
SRM-204ENST00000475189 STAB1Q9NY15 2570 aa13.19□□□□□ -0.3
SRM-204ENST00000475189 TRAV1-2A0A0B4J238 106 aa13.19□□□□□ -0.3
SRM-204ENST00000475189 ZNF729A6NN14 1252 aaPredicted RBP13.19□□□□□ -0.3
SRM-204ENST00000475189 ODF3BA8MYP8 253 aa13.19□□□□□ -0.3
SRM-204ENST00000475189 BPNT1O95861 308 aa13.19□□□□□ -0.3
SRM-204ENST00000475189 MPIG6BO95866 241 aa13.19□□□□□ -0.3
SRM-204ENST00000475189 CDK2P24941 298 aa13.19□□□□□ -0.3
SRM-204ENST00000475189 GDNFP39905 211 aa13.19□□□□□ -0.3
SRM-204ENST00000475189 IER3P46695 156 aa13.19□□□□□ -0.3
SRM-204ENST00000475189 UNC119Q13432 240 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms