RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 PELI1Q96FA3 418 aa4.7□□□□□ -1.66
VARS-222ENST00000470953 OPALINQ96PE5 141 aa4.7□□□□□ -1.66
VARS-222ENST00000470953 GPER1Q99527 375 aa4.7□□□□□ -1.66
VARS-222ENST00000470953 NRIP2Q9BQI9 281 aa4.7□□□□□ -1.66
VARS-222ENST00000470953 DCTN5Q9BTE1 182 aa4.7□□□□□ -1.66
VARS-222ENST00000470953 FGF23Q9GZV9 251 aaPredicted RBP4.7□□□□□ -1.66
VARS-222ENST00000470953 METTL8Q9H825 291 aaKnown RBP4.7□□□□□ -1.66
VARS-222ENST00000470953 ZNF702PQ9H963 129 aa4.7□□□□□ -1.66
VARS-222ENST00000470953 FAM118AQ9NWS6 357 aa4.7□□□□□ -1.66
VARS-222ENST00000470953 AASSQ9UDR5 926 aa4.7□□□□□ -1.66
VARS-222ENST00000470953 IGKV1D-17A0A075B6S4 117 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 TRBV2A0A0J9YWF9 115 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 MEIOCA2RUB1 952 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 M0R1W7 72 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 NPFFO15130 113 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 CLIC3O95833 236 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 HAND1O96004 215 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 TMEM225BP0DP42 221 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 PF4V1P10720 104 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 ZNF44P15621 663 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 PRKACAP17612 351 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 ATF1P18846 271 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 PRDX2P32119 198 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 SOX2P48431 317 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 HSPA13P48723 471 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 CCR9P51686 369 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 LGALS4P56470 323 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 ERVFRD-1P60508 538 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 DGCR2P98153 550 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 CD83Q01151 205 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 KLRD1Q13241 179 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 UBE2V2Q15819 145 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 GRK1Q15835 563 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 FAM76BQ5HYJ3 339 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 ATPAF1Q5TC12 328 aaPredicted RBP4.69□□□□□ -1.66
VARS-222ENST00000470953 ZNF691Q5VV52 312 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 Q6ZS46 218 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 UTS2BQ765I0 119 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 CALHM1Q8IU99 346 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 STX19Q8N4C7 294 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 DNAAF1Q8NEP3 725 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 OR4M1Q8NGD0 313 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 OR52I1Q8NGK6 324 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 OR5D14Q8NGL3 314 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 FGGYQ96C11 551 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 ADAT3Q96EY9 351 aaPredicted RBP4.69□□□□□ -1.66
VARS-222ENST00000470953 SDSLQ96GA7 329 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 S100A13Q99584 98 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 SLC29A1Q99808 456 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 PDCD1LG2Q9BQ51 273 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 WNT10AQ9GZT5 417 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 NCOR1P1Q9H4R4 102 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 IFT22Q9H7X7 185 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 ZMAT4Q9H898 229 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 EXOSC4Q9NPD3 245 aaKnown RBP4.69□□□□□ -1.66
VARS-222ENST00000470953 ERVK13-1Q9NX77 482 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 FRRS1LQ9P0K9 344 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 CKLFQ9UBR5 152 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 EXOGQ9Y2C4 368 aaKnown RBP4.69□□□□□ -1.66
VARS-222ENST00000470953 EXOSC1Q9Y3B2 195 aaKnown RBP4.69□□□□□ -1.66
VARS-222ENST00000470953 MAB21L2Q9Y586 359 aa4.69□□□□□ -1.66
VARS-222ENST00000470953 MUC2Q02817 5179 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 PNMA8CA0A1B0GUJ8 204 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 hADV38S2A0JD32 116 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 FUOMA2VDF0 154 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 ANKRD34BA5PLL1 514 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 EFCAB10A6NFE3 127 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 SIRPB1O00241 398 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 HSPB6O14558 160 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 NOS1APO75052 506 aaPredicted RBP4.68□□□□□ -1.66
VARS-222ENST00000470953 CRYZL1O95825 349 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 IGHA1P01876 353 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 TK1P04183 234 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 ISG15P05161 165 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 CALCBP10092 127 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 GABRB1P18505 474 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 RAB3AP20336 220 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 BCL3P20749 454 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 VAMP1P23763 118 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 MPZP25189 248 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 DCKP27707 260 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 SAA4P35542 130 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 CAPGP40121 348 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 ETV1P50549 477 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 TAS2R43P59537 309 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 NANOS3P60323 173 aaKnown RBP4.68□□□□□ -1.66
VARS-222ENST00000470953 ISL1P61371 349 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 SCN1BQ07699 218 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 IL18R1Q13478 541 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 SMN1Q16637 294 aaKnown RBP4.68□□□□□ -1.66
VARS-222ENST00000470953 CNPY1Q3B7I2 92 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 ARSJQ5FYB0 599 aaPredicted RBP4.68□□□□□ -1.66
VARS-222ENST00000470953 SPIN3Q5JUX0 258 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 FDX2Q6P4F2 183 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 ZNF782Q6ZMW2 699 aaPredicted RBP4.68□□□□□ -1.66
VARS-222ENST00000470953 ETV3LQ6ZN32 361 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 AHSA2Q719I0 299 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 SERPINA12Q8IW75 414 aa4.68□□□□□ -1.66
VARS-222ENST00000470953 MRPL41Q8IXM3 137 aaKnown RBP4.68□□□□□ -1.66
VARS-222ENST00000470953 FAM58AQ8N1B3 248 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms