RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 A0A0U1RQK1 487 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 PNMA8CA0A1B0GUJ8 204 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 NDUFB3O43676 98 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 NDUFA2O43678 99 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 ENSAO43768 121 aaKnown RBP3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 ANGPTL7O43827 346 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 MPZL2O60487 215 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 ZNF737O75373 536 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 NXPH2O95156 264 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 FADS2O95864 444 aaKnown RBP3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 CCL3L1P16619 93 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 ATF1P18846 271 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 AZGP1P25311 298 aaKnown RBP3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 DCKP27707 260 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 PRDX2P32119 198 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 CAPGP40121 348 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 SOX2P48431 317 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 POU3F4P49335 361 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 NPY4RP50391 375 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 FUT6P51993 359 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 SNU13P55769 128 aaKnown RBP3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 DLX6P56179 175 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 CAV3P56539 151 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 NANOS2P60321 138 aaKnown RBP3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 ZP1P60852 638 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 RPS16P62249 146 aaKnown RBP3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 RPS11P62280 158 aaKnown RBP eCLIP3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 ACTC1P68032 377 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 ACTA1P68133 377 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 SLC34A1Q06495 639 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 ST3GAL4Q11206 333 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 IL24Q13007 206 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 IL18R1Q13478 541 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 ZNF273Q14593 569 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 INSL4Q14641 139 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 CDK5R1Q15078 307 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 SLC9A3R2Q15599 337 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 SNCBQ16143 134 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 LDLRAD2Q5SZI1 272 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 TMEM244Q5VVB8 128 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 METTL11BQ5VVY1 283 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 METAP1DQ6UB28 335 aaPredicted RBP3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 BTNL3Q6UXE8 466 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 BAIAP2L2Q6UXY1 529 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 C17orf107Q6ZR85 190 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 C9orf139Q6ZV77 190 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 USP43Q70EL4 1123 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 SLC25A26Q70HW3 274 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 UTS2BQ765I0 119 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 TCF23Q7RTU1 214 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 SLC36A1Q7Z2H8 476 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 ZNF573Q86YE8 665 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 DYNAPQ8N1N2 210 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 SYS1Q8N2H4 156 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 BPIFB2Q8N4F0 458 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 PACRGLQ8N7B6 248 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 ZNF676Q8N7Q3 588 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 TPRX1Q8N7U7 411 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 TMEM185AQ8NFB2 350 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 BPIFB6Q8NFQ5 453 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 OR5D18Q8NGL1 313 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 OR13C3Q8NGS6 347 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 SPATA3Q8NHX4 192 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 C8orf46Q8TAG6 207 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 ZNF671Q8TAW3 534 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 LHX4Q969G2 390 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 BORCS8Q96FH0 119 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 PGLYRP3Q96LB9 341 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 Q96MT0 163 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 SUCNR1Q9BXA5 334 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 PKIBQ9C010 78 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 DNTTIP1Q9H147 329 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 DCLRE1BQ9H816 532 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 PLEKHA1Q9HB21 404 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 ABCB9Q9NP78 766 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 TNFRSF19Q9NS68 423 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 FKBP14Q9NWM8 211 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 ONECUT1Q9UBC0 465 aa3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 DIMT1Q9UNQ2 313 aaKnown RBP3.9□□□□□ -1.79
EXOSC3-204ENST00000465860 MEGF8Q7Z7M0 2845 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 TRAV8-7A0A075B6U6 113 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 IGHV1-69DA0A0B4J2H0 117 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 A0A1W2PPK0 400 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 TMEM212A6NML5 194 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 H0YAE9 185 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 RAB27BO00194 218 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 OGG1O15527 345 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 MMP23AO75900 390 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 ECDO95905 644 aaPredicted RBP3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 IGHV1-69P01742 117 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 IGHV4-59P01825 116 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 TK1P04183 234 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 PIPP12273 146 aaPredicted RBP3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 OMGP23515 440 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 CPT2P23786 658 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 RBP2P50120 134 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 CAPZA1P52907 286 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 MTCP1P56278 107 aa3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
EXOSC3-204ENST00000465860 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms