RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 C5orf49A4QMS7 147 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 CD300LBA8K4G0 201 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 C1orf196B1AJZ1 125 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 PATE3B3GLJ2 98 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 J3QT63 122 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 MSTNO14793 375 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 KCNAB3O43448 404 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 GDF9O60383 454 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 NEURL1O76050 574 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 MT-ND4LP03901 98 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 CEACAM1P13688 526 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 CD46P15529 392 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 RCC1P18754 421 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-202ENST00000459727 NTF4P34130 210 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 MPLP40238 635 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 RPS18P62269 152 aaKnown RBP7.6□□□□□ -1.19
HDAC3-202ENST00000459727 RPL23AP62750 156 aaKnown RBP7.6□□□□□ -1.19
HDAC3-202ENST00000459727 HLA-DRB3P79483 266 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 S100A12P80511 92 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 TGFBR3Q03167 851 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 OR1C1Q15619 314 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 GUK1Q16774 197 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 SP6Q3SY56 376 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 SPIN3Q5JUX0 258 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 TBC1D26Q86UD7 250 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 DTX1Q86Y01 620 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 STX12Q86Y82 276 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 BOLLQ8N9W6 283 aaKnown RBP7.6□□□□□ -1.19
HDAC3-202ENST00000459727 BHLHE23Q8NDY6 225 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 CPEB3Q8NE35 698 aaKnown RBP7.6□□□□□ -1.19
HDAC3-202ENST00000459727 OR1J1Q8NGS3 322 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 LILRB1Q8NHL6 650 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-202ENST00000459727 OR5P3Q8WZ94 311 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 SLAMF9Q96A28 289 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 ZNF845Q96IR2 970 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-202ENST00000459727 POM121L2Q96KW2 1035 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 RAB40CQ96S21 281 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 RTL8AQ9BWD3 113 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 TTTY12Q9BZ98 90 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 EGLN1Q9GZT9 426 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 SLC35B3Q9H1N7 401 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 LIME1Q9H400 295 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 KCNJ16Q9NPI9 418 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 PHF3Q92576 2039 aaKnown RBP7.6□□□□□ -1.19
HDAC3-202ENST00000459727 KIAA1549Q9HCM3 1950 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 VPS13AQ96RL7 3174 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 ZNF732B4DXR9 585 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 FAM157AC9JC47 383 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 K7N7A8 449 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 NME2P1O60361 137 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 S100A8P05109 93 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 OR8U9P0C7N5 309 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 PATE4P0C8F1 98 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 HOXB1P14653 301 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-202ENST00000459727 BCL3P20749 454 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 ITGA3P26006 1051 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 CD82P27701 267 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 GNRHRP30968 328 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 NPBWR1P48145 328 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 GPM6AP51674 278 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 AKR1C2P52895 323 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 ID3Q02535 119 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 TLE4Q04727 773 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 AKR1C1Q04828 323 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 MSMO1Q15800 293 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 GABRA6Q16445 453 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 TBC1D28Q2M2D7 210 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 ACSF3Q4G176 576 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-202ENST00000459727 DMRTC1Q5HYR2 192 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 DCAF10Q5QP82 559 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 CDCP2Q5VXM1 449 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 ZNF880Q6PDB4 577 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 TMEM88Q6PEY1 159 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 MEX3BQ6ZN04 569 aaKnown RBP7.59□□□□□ -1.19
HDAC3-202ENST00000459727 TIPARPQ7Z3E1 657 aaKnown RBP7.59□□□□□ -1.19
HDAC3-202ENST00000459727 CALHM1Q8IU99 346 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 IQCF2Q8IXL9 164 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 C1orf174Q8IYL3 243 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 SELENOHQ8IZQ5 122 aaKnown RBP7.59□□□□□ -1.19
HDAC3-202ENST00000459727 TMEM178AQ8NBL3 297 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 ZBTB34Q8NCN2 500 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 DMBX1Q8NFW5 382 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 OR10J5Q8NHC4 309 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 FAM216AQ8WUB2 273 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 SECTM1Q8WVN6 248 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 HPSE2Q8WWQ2 592 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 LSM10Q969L4 123 aaKnown RBP7.59□□□□□ -1.19
HDAC3-202ENST00000459727 ERGIC1Q969X5 290 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 ZNF775Q96BV0 537 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-202ENST00000459727 TP53RKQ96S44 253 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 SMIM3Q9BZL3 60 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 EIF5A2Q9GZV4 153 aaKnown RBP7.59□□□□□ -1.19
HDAC3-202ENST00000459727 C11orf1Q9H5F2 150 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 CALHM2Q9HA72 323 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 LIN7CQ9NUP9 197 aaKnown RBP7.59□□□□□ -1.19
HDAC3-202ENST00000459727 KIAA1456Q9P272 454 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 OR2W1Q9Y3N9 320 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 MMP24Q9Y5R2 645 aa7.59□□□□□ -1.19
HDAC3-202ENST00000459727 KMT2BQ9UMN6 2715 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-202ENST00000459727 ARID1BQ8NFD5 2236 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms