RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 GEMIN2O14893 280 aaKnown RBP11.55□□□□□ -0.56
HDAC4-205ENST00000454542 SLC22A1O15245 554 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 ARL6IP5O75915 188 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 CSTBP04080 98 aaKnown RBP11.55□□□□□ -0.56
HDAC4-205ENST00000454542 FAM90A15PP0C7V4 464 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 FAM90A13PP0C7W8 464 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 FAM90A14PP0C7W9 464 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 FAM90A24PP0C7X0 464 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 IGHV1-8P0DP01 117 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 GTF2F2P13984 249 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 GALP22466 123 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 SAA4P35542 130 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 GLIPR1P48060 266 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 BAMBIQ13145 260 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 ATXN7L3Q14CW9 347 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-205ENST00000454542 SLC9A3R2Q15599 337 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 MIDNQ504T8 468 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 PAN3Q58A45 887 aaKnown RBP11.55□□□□□ -0.56
HDAC4-205ENST00000454542 RSBN1Q5VWQ0 802 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-205ENST00000454542 PNKDQ8N490 385 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 TMEM104Q8NE00 496 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 SPATA3Q8NHX4 192 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 Q96M66 194 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 S100A13Q99584 98 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 PCDHB16Q9NRJ7 776 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 TAS2R3Q9NYW6 316 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 CCRL2O00421 344 aa11.54□□□□□ -0.56
HDAC4-205ENST00000454542 UBBP0CG47 229 aa11.54□□□□□ -0.56
HDAC4-205ENST00000454542 CFPP27918 469 aa11.54□□□□□ -0.56
HDAC4-205ENST00000454542 AESQ08117 197 aa11.54□□□□□ -0.56
HDAC4-205ENST00000454542 KRBOX4Q5JUW0 171 aa11.54□□□□□ -0.56
HDAC4-205ENST00000454542 GLT8D1Q68CQ7 371 aa11.54□□□□□ -0.56
HDAC4-205ENST00000454542 ZNF626Q68DY1 528 aa11.54□□□□□ -0.56
HDAC4-205ENST00000454542 ZNF782Q6ZMW2 699 aaPredicted RBP11.54□□□□□ -0.56
HDAC4-205ENST00000454542 SUMF2Q8NBJ7 301 aa11.54□□□□□ -0.56
HDAC4-205ENST00000454542 OR11H6Q8NGC7 330 aa11.54□□□□□ -0.56
HDAC4-205ENST00000454542 PLPPR1Q8TBJ4 325 aa11.54□□□□□ -0.56
HDAC4-205ENST00000454542 NR1H4Q96RI1 486 aaPredicted RBP11.54□□□□□ -0.56
HDAC4-205ENST00000454542 DPCDQ9BVM2 203 aaPredicted RBP11.54□□□□□ -0.56
HDAC4-205ENST00000454542 HEXA-AS1Q9H8Q6 139 aa11.54□□□□□ -0.56
HDAC4-205ENST00000454542 POMT1Q9Y6A1 747 aa11.54□□□□□ -0.56
HDAC4-205ENST00000454542 SESN1Q9Y6P5 492 aa11.54□□□□□ -0.56
HDAC4-205ENST00000454542 TRGV10A0A0A0MS01 117 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 TRDV1A0A1B0GX56 115 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 SHISA3A0PJX4 238 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 MEX3AA1L020 520 aaKnown RBP11.53□□□□□ -0.56
HDAC4-205ENST00000454542 SLC17A2O00624 439 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 HOXA3O43365 443 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-205ENST00000454542 OR7C1O76099 320 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-205ENST00000454542 FBP1P09467 338 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 CGB3P0DN86 165 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 CGB7P0DN87 165 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 MGMTP16455 207 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 QRFPP83859 136 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 SCN1BQ07699 218 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 HEPN1Q6WQI6 88 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 GAPTQ8N292 157 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 OR6M1Q8NGM8 313 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 SLC25A28Q96A46 364 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 SLITRK2Q9H156 845 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 GAL3ST2Q9H3Q3 398 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 LINC00574Q9H8X3 128 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 OR6C3Q9NZP0 311 aa11.53□□□□□ -0.56
HDAC4-205ENST00000454542 TRAV1-2A0A0B4J238 106 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 MEIOCA2RUB1 952 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 ZNF729A6NN14 1252 aaPredicted RBP11.52□□□□□ -0.57
HDAC4-205ENST00000454542 TMEM14DPA8MWL7 114 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 HSPB6O14558 160 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 MMP23AO75900 390 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 BPNT1O95861 308 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 VSIG8P0DPA2 414 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 COX7A1P24310 79 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 CALRP27797 417 aaKnown RBP11.52□□□□□ -0.57
HDAC4-205ENST00000454542 PSMB9P28065 219 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 CD34P28906 385 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 COMPP49747 757 aaPredicted RBP11.52□□□□□ -0.57
HDAC4-205ENST00000454542 UNC119Q13432 240 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 TAF9Q16594 264 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 C17orf58Q2M2W7 97 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 SYT6Q5T7P8 510 aaPredicted RBP11.52□□□□□ -0.57
HDAC4-205ENST00000454542 SIGIRRQ6IA17 410 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 SLC35E4Q6ICL7 350 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 BEND2Q8NDZ0 799 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 OR13A1Q8NGR1 328 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 OR13D1Q8NGV5 346 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 SSMEM1Q8WWF3 244 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 TM2D1Q9BX74 207 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 CST11Q9H112 138 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 SPACA1Q9HBV2 294 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 KIF25Q9UIL4 384 aa11.52□□□□□ -0.57
HDAC4-205ENST00000454542 TBL2Q9Y4P3 447 aaKnown RBP11.52□□□□□ -0.57
HDAC4-205ENST00000454542 A0A087X0M5 115 aa11.51□□□□□ -0.57
HDAC4-205ENST00000454542 IGHV2-26A0A0B4J1V2 119 aa11.51□□□□□ -0.57
HDAC4-205ENST00000454542 A0A1B0GX30 115 aa11.51□□□□□ -0.57
HDAC4-205ENST00000454542 A0A1W2PRD5 423 aa11.51□□□□□ -0.57
HDAC4-205ENST00000454542 A0A1W2PRF3 423 aa11.51□□□□□ -0.57
HDAC4-205ENST00000454542 A0A1W2PRM7 423 aa11.51□□□□□ -0.57
HDAC4-205ENST00000454542 TMEM89A2RUT3 159 aa11.51□□□□□ -0.57
HDAC4-205ENST00000454542 CRTAPO75718 401 aaPredicted RBP11.51□□□□□ -0.57
HDAC4-205ENST00000454542 HTR2CP28335 458 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms