RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SH2D1BO14796 132 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 GEMIN2O14893 280 aaKnown RBP10.8□□□□□ -0.68
VPS33A-202ENST00000451053 CTDSPLO15194 276 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 ZNF737O75373 536 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 FOXH1O75593 365 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 OR7C1O76099 320 aaPredicted RBP10.8□□□□□ -0.68
VPS33A-202ENST00000451053 LY6G6DO95868 133 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 TGFAP01135 160 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 MSMBP08118 114 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 ZNF44P15621 663 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 NDUFB7P17568 137 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 NPY4RP50391 375 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 TAF9Q16594 264 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 PNLIPRP3Q17RR3 467 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 LRRC10Q5BKY1 277 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 C17orf107Q6ZR85 190 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 Q6ZTK2 550 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 OR4M2Q8NGB6 313 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 NICN1Q9BSH3 213 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 GSX1Q9H4S2 264 aaPredicted RBP10.8□□□□□ -0.68
VPS33A-202ENST00000451053 IFT22Q9H7X7 185 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.8□□□□□ -0.68
VPS33A-202ENST00000451053 PLEKHJ1Q9NW61 149 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 HSF4Q9ULV5 492 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 A0A0A6YYD4 124 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 FOXI3A8MTJ6 420 aaPredicted RBP10.79□□□□□ -0.68
VPS33A-202ENST00000451053 SERPINE3A8MV23 424 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 K7N7A8 449 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 SULT1C2O00338 296 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 SLC33A1O00400 549 aaPredicted RBP10.79□□□□□ -0.68
VPS33A-202ENST00000451053 DEGS1O15121 323 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 SOCS1O15524 211 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 CD5LO43866 347 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 PSPNO60542 156 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 PDCD6O75340 191 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 TK1P04183 234 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 GLAP06280 429 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 HIST1H1DP16402 221 aaKnown RBP10.79□□□□□ -0.68
VPS33A-202ENST00000451053 FUT3P21217 361 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 PAX2Q02962 417 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 ZNF79Q15937 498 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 MOGAT2Q3SYC2 334 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 BTN2A1Q7KYR7 527 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 BIVMQ86UB2 503 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 SNX29P2Q8IUI4 249 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 IZUMO1Q8IYV9 350 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 Q8N402 240 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 OR4S1Q8NGB4 309 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 SRRQ9GZT4 340 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 CHST6Q9GZX3 395 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 SHARPINQ9H0F6 387 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 AUNIPQ9H7T9 357 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 SCPEP1Q9HB40 452 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 PALMDQ9NP74 551 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 MMP26Q9NRE1 261 aa10.79□□□□□ -0.68
VPS33A-202ENST00000451053 POLR3KQ9Y2Y1 108 aaPredicted RBP10.79□□□□□ -0.68
VPS33A-202ENST00000451053 FLNAP21333 2647 aaKnown RBP10.78□□□□□ -0.68
VPS33A-202ENST00000451053 LOC105371242A0A075B767 164 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 TRAV24A0A0B4J272 114 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 TRAV20A0A0B4J274 112 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 GABARAPH6UMI1 98 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 HSPB6O14558 160 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 GSTZ1O43708 216 aaPredicted RBP10.78□□□□□ -0.68
VPS33A-202ENST00000451053 CA11O75493 328 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 HLA-DQB1P01920 261 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 LMO1P25800 156 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 CHATP28329 748 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 PRSS3P35030 304 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 OR3A1P47881 315 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 MRPS15P82914 257 aaKnown RBP10.78□□□□□ -0.68
VPS33A-202ENST00000451053 RBM39Q14498 530 aaKnown RBP10.78□□□□□ -0.68
VPS33A-202ENST00000451053 ZNF260Q3ZCT1 412 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 CDNFQ49AH0 187 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 NKAPLQ5M9Q1 402 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 ATAD3CQ5T2N8 411 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 HACD4Q5VWC8 232 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 GLCCI1Q86VQ1 547 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 OR8H2Q8N162 312 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 DTX3Q8N9I9 347 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 SMIM4Q8WVI0 70 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 FCAMRQ8WWV6 532 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 H1FXQ92522 213 aaKnown RBP10.78□□□□□ -0.68
VPS33A-202ENST00000451053 DACT3Q96B18 629 aaPredicted RBP10.78□□□□□ -0.68
VPS33A-202ENST00000451053 TMEM186Q96B77 213 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 ARHGAP5-AS1Q96IT6 56 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 CYYR1Q96J86 154 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 SNX22Q96L94 193 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 ABHD1Q96SE0 405 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 FAM234AQ9H0X4 552 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 PPA2Q9H2U2 334 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 HIF1ANQ9NWT6 349 aa10.78□□□□□ -0.68
VPS33A-202ENST00000451053 RCC2Q9P258 522 aaKnown RBP10.78□□□□□ -0.68
VPS33A-202ENST00000451053 ZNF469Q96JG9 3925 aaPredicted RBP10.78□□□□□ -0.68
VPS33A-202ENST00000451053 MED13LQ71F56 2210 aa10.77□□□□□ -0.68
VPS33A-202ENST00000451053 ARHGAP32A7KAX9 2087 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 IGHV2-70DA0A0C4DH43 119 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 MCRIP1C9JLW8 97 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 MFNGO00587 321 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 LPLP06858 475 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 MELTFP08582 738 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms