RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 RBM39Q14498 530 aaKnown RBP13.53□□□□□ -0.24
LINC00398-201ENST00000414407 ZNF273Q14593 569 aa13.53□□□□□ -0.24
LINC00398-201ENST00000414407 P2RY14Q15391 338 aa13.53□□□□□ -0.24
LINC00398-201ENST00000414407 C2orf76Q3KRA6 126 aa13.53□□□□□ -0.24
LINC00398-201ENST00000414407 KRBOX4Q5JUW0 171 aa13.53□□□□□ -0.24
LINC00398-201ENST00000414407 ATAD3CQ5T2N8 411 aa13.53□□□□□ -0.24
LINC00398-201ENST00000414407 HES5Q5TA89 166 aa13.53□□□□□ -0.24
LINC00398-201ENST00000414407 GPR157Q5UAW9 335 aa13.53□□□□□ -0.24
LINC00398-201ENST00000414407 NCR3LG1Q68D85 454 aa13.53□□□□□ -0.24
LINC00398-201ENST00000414407 C9orf139Q6ZV77 190 aa13.53□□□□□ -0.24
LINC00398-201ENST00000414407 VMO1Q7Z5L0 202 aa13.53□□□□□ -0.24
LINC00398-201ENST00000414407 C11orf42Q8N5U0 333 aa13.53□□□□□ -0.24
LINC00398-201ENST00000414407 OR51D1Q8NGF3 324 aa13.53□□□□□ -0.24
LINC00398-201ENST00000414407 FAM46BQ96A09 425 aa13.53□□□□□ -0.24
LINC00398-201ENST00000414407 COQ2Q96H96 371 aa13.53□□□□□ -0.24
LINC00398-201ENST00000414407 URM1Q9BTM9 101 aaKnown RBP13.53□□□□□ -0.24
LINC00398-201ENST00000414407 FUNDC2Q9BWH2 189 aa13.53□□□□□ -0.24
LINC00398-201ENST00000414407 TRGV10A0A0A0MS01 117 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 ODAMA1E959 279 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 C17orf98A8MV24 154 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 MCRIP1C9JLW8 97 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 LDLRAD4O15165 306 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 TMEM127O75204 238 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 IFNA2P01563 188 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 TFAP2AP05549 437 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 EPHA1P21709 976 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 GLIPR1P48060 266 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 ALDH3B2P48448 385 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 DLX6P56179 175 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 ATXN7L3Q14CW9 347 aaPredicted RBP13.52□□□□□ -0.25
LINC00398-201ENST00000414407 RSBN1Q5VWQ0 802 aaPredicted RBP13.52□□□□□ -0.25
LINC00398-201ENST00000414407 SLC35E4Q6ICL7 350 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 OR10K2Q6IF99 312 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 TCF23Q7RTU1 214 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 BPIFB2Q8N4F0 458 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 FAM89BQ8N5H3 189 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 TPRX1Q8N7U7 411 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 TNFRSF14Q92956 283 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 ZNF714Q96N38 554 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 RNF167Q9H6Y7 350 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 TAS2R3Q9NYW6 316 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 OR6C3Q9NZP0 311 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 ZNF581Q9P0T4 197 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 RAB22AQ9UL26 194 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 SETD2Q9BYW2 2564 aaPredicted RBP13.52□□□□□ -0.25
LINC00398-201ENST00000414407 NF1P21359 2839 aa13.52□□□□□ -0.25
LINC00398-201ENST00000414407 TRAV40A0A0B4J280 105 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 CENPVL3A0A0U1RRI6 287 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 HSPB6O14558 160 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 PDCD6O75340 191 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 CA11O75493 328 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 IGHV4-38-2P0DP08 117 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 CCL3L1P16619 93 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 FPR2P25090 351 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 CLDN12P56749 244 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 GUCA2AQ02747 115 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 FAM189A2Q15884 450 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 TUSC1Q2TAM9 212 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 SIGIRRQ6IA17 410 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 RAB12Q6IQ22 244 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 PTX4Q96A99 478 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 NEDD4LQ96PU5 975 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 LPAR5Q9H1C0 372 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 GAL3ST2Q9H3Q3 398 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 LIN7BQ9HAP6 207 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 PEX16Q9Y5Y5 336 aa13.51□□□□□ -0.25
LINC00398-201ENST00000414407 IGHV1-69DA0A0B4J2H0 117 aa13.5□□□□□ -0.25
LINC00398-201ENST00000414407 IGHV1-69P01742 117 aa13.5□□□□□ -0.25
LINC00398-201ENST00000414407 ERVFRD-1P60508 538 aa13.5□□□□□ -0.25
LINC00398-201ENST00000414407 SFXN4Q6P4A7 337 aa13.5□□□□□ -0.25
LINC00398-201ENST00000414407 ANKRD13BQ86YJ7 626 aa13.5□□□□□ -0.25
LINC00398-201ENST00000414407 ZNF565Q8N9K5 539 aa13.5□□□□□ -0.25
LINC00398-201ENST00000414407 PLPPR1Q8TBJ4 325 aa13.5□□□□□ -0.25
LINC00398-201ENST00000414407 LHX4Q969G2 390 aa13.5□□□□□ -0.25
LINC00398-201ENST00000414407 MS4A7Q9GZW8 240 aaPredicted RBP13.5□□□□□ -0.25
LINC00398-201ENST00000414407 KCNK15Q9H427 330 aa13.5□□□□□ -0.25
LINC00398-201ENST00000414407 HEXA-AS1Q9H8Q6 139 aa13.5□□□□□ -0.25
LINC00398-201ENST00000414407 SIRT7Q9NRC8 400 aa13.5□□□□□ -0.25
LINC00398-201ENST00000414407 MXRA5Q9NR99 2828 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 ZFHX3Q15911 3703 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 MEIKINA0A087WXM9 373 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 TMEM272A0A1B0GTI8 110 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 TMEM30CPA0ZSE6 113 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 ZNF729A6NN14 1252 aaPredicted RBP13.49□□□□□ -0.25
LINC00398-201ENST00000414407 IL1AP01583 271 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 CGB3P0DN86 165 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 CGB7P0DN87 165 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 RAB6AP20340 208 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 CHATP28329 748 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 UBE2E1P51965 193 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 SCAND1P57086 179 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 ZNF497Q6ZNH5 498 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 GPR141Q7Z602 305 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 TRAPPC6BQ86SZ2 158 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 CROCCP3Q8IVE0 287 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 GAPTQ8N292 157 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 OR56B1Q8NGI3 324 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 NEK7Q8TDX7 302 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 NICN1Q9BSH3 213 aa13.49□□□□□ -0.25
LINC00398-201ENST00000414407 ZNF69Q9UC07 566 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms