RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 HIST1H2BCP62807 126 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 NKX6-1P78426 367 aaPredicted RBP14.23□□□□□ -0.13
CDK11B-204ENST00000407249 HIST2H2BEQ16778 126 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.23□□□□□ -0.13
CDK11B-204ENST00000407249 COL5A1-AS1Q5SY13 56 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 STXBP6Q8NFX7 210 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 OR51T1Q8NGJ9 327 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 HIST1H2BHQ93079 126 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 IP6K3Q96PC2 410 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 HIST1H2BNQ99877 126 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 HIST1H2BMQ99879 126 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 PARP12Q9H0J9 701 aaKnown RBP14.23□□□□□ -0.13
CDK11B-204ENST00000407249 PRDM6Q9NQX0 595 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 TUBD1Q9UJT1 453 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 C14orf166Q9Y224 244 aaKnown RBP14.23□□□□□ -0.13
CDK11B-204ENST00000407249 POLR1DQ9Y2S0 133 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 LIPT2A6NK58 231 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 RPL29P47914 159 aaKnown RBP14.23□□□□□ -0.13
CDK11B-204ENST00000407249 OPN5Q6U736 354 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 SHISA2Q6UWI4 295 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.23□□□□□ -0.13
CDK11B-204ENST00000407249 OR2AJ1Q8NGZ0 328 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 SCRT1Q9BWW7 348 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 SMIM3Q9BZL3 60 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 VDAC3Q9Y277 283 aa14.23□□□□□ -0.13
CDK11B-204ENST00000407249 TRIOBPQ9H2D6 2365 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 ZNF705GA8MUZ8 300 aaPredicted RBP14.22□□□□□ -0.13
CDK11B-204ENST00000407249 TSPAN15O95858 294 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 CCL1P22362 96 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 ARR3P36575 388 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 SNCAP37840 140 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 RAB7AP51149 207 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 UBE2V1Q13404 147 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 DMRTC1Q5HYR2 192 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 C16orf47Q6ZP98 133 aaPredicted RBP14.22□□□□□ -0.13
CDK11B-204ENST00000407249 FNDC9Q8TBE3 224 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 DDIT4LQ96D03 193 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 TP53RKQ96S44 253 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 PLEKHA2Q9HB19 425 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 TNRC18O15417 2968 aaPredicted RBP14.22□□□□□ -0.13
CDK11B-204ENST00000407249 H3BML4 177 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 CFIP05156 583 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 HPNP05981 417 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 CRYGCP07315 174 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 FGF5P12034 268 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 MFAP5Q13361 173 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 C1QL2Q7Z5L3 287 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 APCDD1LQ8NCL9 501 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 OR52M1Q8NGK5 317 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 ALKBH4Q9NXW9 302 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 SMPXQ9UHP9 88 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 SPEGQ15772 3267 aa14.22□□□□□ -0.13
CDK11B-204ENST00000407249 A0A1W2PNV4 684 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 M0QZ24 198 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 DFFBO76075 338 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 BLVRBP30043 206 aaPredicted RBP14.21□□□□□ -0.13
CDK11B-204ENST00000407249 CDAP32320 146 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 UCP2P55851 309 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 IL11RAQ14626 422 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 MIDNQ504T8 468 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 MAFAQ8NHW3 353 aaPredicted RBP14.21□□□□□ -0.13
CDK11B-204ENST00000407249 RGCCQ9H4X1 137 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 NXT1Q9UKK6 140 aaKnown RBP14.21□□□□□ -0.13
CDK11B-204ENST00000407249 RER1O15258 196 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 CST2P09228 141 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 FOXF1Q12946 379 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 CRIP3Q6Q6R5 217 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 COMMD1Q8N668 190 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 SLC38A9Q8NBW4 561 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 YPEL4Q96NS1 127 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 PECRQ9BY49 303 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 ARV1Q9H2C2 271 aa14.21□□□□□ -0.13
CDK11B-204ENST00000407249 IGKV1D-8A0A087WSZ0 117 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 TIAF1O95411 115 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 PF4V1P10720 104 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 TNFSF10P50591 281 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 FBXW4P57775 412 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 KISS1Q15726 138 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 UBE2V2Q15819 145 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 SHISA6Q6ZSJ9 500 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 DOK3Q7L591 496 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 CPEB2Q7Z5Q1 589 aaKnown RBP14.2□□□□□ -0.14
CDK11B-204ENST00000407249 TOMM40LQ969M1 308 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 ERGIC1Q969X5 290 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 SLC25A31Q9H0C2 315 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 PNRC2Q9NPJ4 139 aaKnown RBP14.2□□□□□ -0.14
CDK11B-204ENST00000407249 SHISA8B8ZZ34 492 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 DANCRP0C864 163 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 PGA4P0DJD7 388 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 PGA3P0DJD8 388 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 CHRNB4P30926 498 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 ZNF41P51814 821 aaPredicted RBP14.2□□□□□ -0.14
CDK11B-204ENST00000407249 CLRN1P58418 232 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 C1orf194Q5T5A4 169 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 LINC01551Q86U37 167 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 SULF2Q8IWU5 870 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 SGPP2Q8IWX5 399 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 RNF138Q8WVD3 245 aa14.2□□□□□ -0.14
CDK11B-204ENST00000407249 WDR54Q9H977 334 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms