RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 NCOR1P1Q9H4R4 102 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 EXOSC4Q9NPD3 245 aaKnown RBP6.92□□□□□ -1.3
CAPN3-208ENST00000397204 OR6C3Q9NZP0 311 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 WARS2Q9UGM6 360 aaKnown RBP6.92□□□□□ -1.3
CAPN3-208ENST00000397204 SACSQ9NZJ4 4579 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 IGKV1-9A0A0C4DH69 117 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 KBTBD11-OT1A0A1B0GTJ5 212 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 LOC107986453A0A1B0GWG9 222 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 A0A1W2PQL4 384 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-208ENST00000397204 ZAR1LA6NP61 321 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 SERPINE3A8MV23 424 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 NUDT19A8MXV4 375 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 H3BSH0 61 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 SIRPB1O00241 398 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 DEGS1O15121 323 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 FKBP6O75344 327 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 IGHG2P01859 326 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 CCDC159P0C7I6 412 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 CGB3P0DN86 165 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 CGB7P0DN87 165 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 CALCBP10092 127 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 ATF1P18846 271 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 GDNFP39905 211 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 POU3F4P49335 361 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 GNGT1P63211 74 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 TMED1Q13445 227 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 KRBOX4Q5JUW0 171 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 C12orf73Q69YU5 71 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 SLC16A12Q6ZSM3 486 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 SSX6Q7RTT6 188 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 KCTD20Q7Z5Y7 419 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 SPATA24Q86W54 205 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 ZNF695Q8IW36 515 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 SAXO1Q8IYX7 474 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 PRSS35Q8N3Z0 413 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 HAVCR2Q8TDQ0 301 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 TFAP2CQ92754 450 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 RPEQ96AT9 228 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 SPSB1Q96BD6 273 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 FGGYQ96C11 551 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 ADAT3Q96EY9 351 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-208ENST00000397204 EAF1Q96JC9 268 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-208ENST00000397204 IL4I1Q96RQ9 567 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 TBX5Q99593 518 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 COMMD4Q9H0A8 199 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 KRT84Q9NSB2 600 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 ENOPH1Q9UHY7 261 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 GSTK1Q9Y2Q3 226 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 AMMECR1Q9Y4X0 333 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-208ENST00000397204 LSM4Q9Y4Z0 139 aaKnown RBP6.91□□□□□ -1.3
CAPN3-208ENST00000397204 TENM2Q9NT68 2774 aa6.91□□□□□ -1.3
CAPN3-208ENST00000397204 TCRBV3S1A0A5B6 114 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 J3QR06 171 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 CCL24O00175 119 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 KDM4BO94953 1096 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 MT-ND2P03891 347 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 ISG15P05161 165 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 SNRNP70P08621 437 aaKnown RBP6.9□□□□□ -1.3
CAPN3-208ENST00000397204 OCM2P0CE71 109 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 OCMP0CE72 109 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-208ENST00000397204 ZNF44P15621 663 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 NFYBP25208 207 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 EPHA2P29317 976 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 C21orf33P30042 268 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-208ENST00000397204 HTR1FP30939 366 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 ATP6V1E1P36543 226 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 RAB7AP51149 207 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 SNU13P55769 128 aaKnown RBP6.9□□□□□ -1.3
CAPN3-208ENST00000397204 SCN1BQ07699 218 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 MADCAM1Q13477 382 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 FLOT2Q14254 428 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 RBM39Q14498 530 aaKnown RBP6.9□□□□□ -1.3
CAPN3-208ENST00000397204 HNF4GQ14541 408 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 PNLIPRP3Q17RR3 467 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 C17orf58Q2M2W7 97 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 KLHL22Q53GT1 634 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 Q6P435 159 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 TEX38Q6PEX7 206 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 C18orf65Q6ZTR6 163 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 FOXRED2Q8IWF2 684 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 RDH10Q8IZV5 341 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 OR8H3Q8N146 312 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 C5orf56Q8N8D9 126 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 KLHL30-AS1Q8NEE0 82 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 OR2G2Q8NGZ5 317 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 TOMM40LQ969M1 308 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 COQ2Q96H96 371 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 NOL4LQ96MY1 436 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-208ENST00000397204 GON7Q9BXV9 100 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 LINC00574Q9H8X3 128 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 NEK6Q9HC98 313 aa6.9□□□□□ -1.3
CAPN3-208ENST00000397204 IGKV1-12A0A0C4DH73 117 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 SHISA3A0PJX4 238 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 FAM172BPA6NC97 362 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 G3V2T6 193 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 M0R129 80 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 SLC33A1O00400 549 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-208ENST00000397204 MITFO75030 526 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-208ENST00000397204 IGKV1D-12P01611 117 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 ZNF20P17024 532 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms