RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 NCR3LG1Q68D85 454 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 FAM3DQ96BQ1 224 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 URM1Q9BTM9 101 aaKnown RBP10.88□□□□□ -0.67
CKAP2-202ENST00000378034 TM2D1Q9BX74 207 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 NF1P21359 2839 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 NAV3Q8IVL0 2385 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 TRGV10A0A0A0MS01 117 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 C17orf98A8MV24 154 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 MCRIP1C9JLW8 97 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 FUT3P21217 361 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 OR10A3P58181 314 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 GUCA2AQ02747 115 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 UNC119Q13432 240 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 ZNF273Q14593 569 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 C9orf139Q6ZV77 190 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 OR51D1Q8NGF3 324 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 FAM46BQ96A09 425 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 COQ2Q96H96 371 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 ZNF714Q96N38 554 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 CENPOQ9BU64 300 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 TAS2R3Q9NYW6 316 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 OR6C3Q9NZP0 311 aa10.87□□□□□ -0.67
CKAP2-202ENST00000378034 TRAV40A0A0B4J280 105 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 CENPVL3A0A0U1RRI6 287 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 ODAMA1E959 279 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 TMEM127O75204 238 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 SDC2P34741 201 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 GLIPR1P48060 266 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 DLX6P56179 175 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 ATXN7L3Q14CW9 347 aaPredicted RBP10.86□□□□□ -0.67
CKAP2-202ENST00000378034 FAM189A2Q15884 450 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 C2orf76Q3KRA6 126 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 HES5Q5TA89 166 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 SLC35E4Q6ICL7 350 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 OR10K2Q6IF99 312 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 C11orf42Q8N5U0 333 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 GAL3ST2Q9H3Q3 398 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 VGLL3A8MV65 326 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 HSPB6O14558 160 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 LDLRAD4O15165 306 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 PDCD6O75340 191 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 CA11O75493 328 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 IGHV4-38-2P0DP08 117 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 CCL3L1P16619 93 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 ERVFRD-1P60508 538 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 RSBN1Q5VWQ0 802 aaPredicted RBP10.86□□□□□ -0.67
CKAP2-202ENST00000378034 RAB12Q6IQ22 244 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 TCF23Q7RTU1 214 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 TRAPPC6BQ86SZ2 158 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 BPIFB2Q8N4F0 458 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 TPRX1Q8N7U7 411 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 ZNF565Q8N9K5 539 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 TNFRSF14Q92956 283 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 LHX4Q969G2 390 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 FUNDC2Q9BWH2 189 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 MS4A7Q9GZW8 240 aaPredicted RBP10.86□□□□□ -0.67
CKAP2-202ENST00000378034 HEXA-AS1Q9H8Q6 139 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 RAB22AQ9UL26 194 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 PEX16Q9Y5Y5 336 aa10.86□□□□□ -0.67
CKAP2-202ENST00000378034 ANK3Q12955 4377 aaKnown RBP10.86□□□□□ -0.67
CKAP2-202ENST00000378034 IGHV1-69DA0A0B4J2H0 117 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 IGHV1-69P01742 117 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 ALDH3B2P48448 385 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 CLDN12P56749 244 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 NR2C2APQ86WQ0 139 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 FAM89BQ8N5H3 189 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 PTX4Q96A99 478 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 NEDD4LQ96PU5 975 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 LPAR5Q9H1C0 372 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 LIN7BQ9HAP6 207 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 SIRT7Q9NRC8 400 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 ZNF581Q9P0T4 197 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 MXRA5Q9NR99 2828 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 MEIKINA0A087WXM9 373 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 TMEM30CPA0ZSE6 113 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 ZNF729A6NN14 1252 aaPredicted RBP10.85□□□□□ -0.67
CKAP2-202ENST00000378034 TFAP2AP05549 437 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 RAB6AP20340 208 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 UBE2E1P51965 193 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 TUSC1Q2TAM9 212 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 SIGIRRQ6IA17 410 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 SFXN4Q6P4A7 337 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 CROCCP3Q8IVE0 287 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 PLPPR1Q8TBJ4 325 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 NEK7Q8TDX7 302 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 SUCNR1Q9BXA5 334 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 KCNK15Q9H427 330 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 RNF167Q9H6Y7 350 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 ZNF69Q9UC07 566 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 KIF25Q9UIL4 384 aa10.85□□□□□ -0.67
CKAP2-202ENST00000378034 A0A0A6YYJ9 748 aa10.84□□□□□ -0.67
CKAP2-202ENST00000378034 TMEM272A0A1B0GTI8 110 aa10.84□□□□□ -0.67
CKAP2-202ENST00000378034 RNASEK-C17orf49H0YIS7 233 aa10.84□□□□□ -0.67
CKAP2-202ENST00000378034 CHATP28329 748 aa10.84□□□□□ -0.67
CKAP2-202ENST00000378034 SCAND1P57086 179 aa10.84□□□□□ -0.67
CKAP2-202ENST00000378034 ZNF497Q6ZNH5 498 aa10.84□□□□□ -0.67
CKAP2-202ENST00000378034 USP43Q70EL4 1123 aa10.84□□□□□ -0.67
CKAP2-202ENST00000378034 ANKRD13BQ86YJ7 626 aa10.84□□□□□ -0.67
CKAP2-202ENST00000378034 ZNF418Q8TF45 676 aaPredicted RBP10.84□□□□□ -0.67
CKAP2-202ENST00000378034 SVEP1Q4LDE5 3571 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms