RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ARFGEF1Q9Y6D6 1849 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 OR10G4Q8NGN3 311 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 OR10G9Q8NGN4 311 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 OR10G7Q8NGN6 311 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 UBE2FQ969M7 185 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 GHITMQ9H3K2 345 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 AUNIPQ9H7T9 357 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 TMEM238LA0A1B0GVL6 79 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 TCRBV5S2A0A599 114 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 A6NJY4 79 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 PRICKLE4Q2TBC4 344 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 UBTD1Q9HAC8 227 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 M0R296 226 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 RIMKLAQ8IXN7 391 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 ARHGAP5-AS1Q96IT6 56 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 MPV17LQ2QL34 196 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 MRM1Q6IN84 353 aaKnown RBP8.58□□□□□ -1.04
CUX1-203ENST00000360264 FAM210BQ96KR6 192 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 FLVCR2Q9UPI3 526 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 DEFB108AA8MXU0 73 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 FUCA1P04066 466 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 NXPH1P58417 271 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 DPPA3Q6W0C5 159 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 STARD10Q9Y365 291 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 C16orf97H3BN30 126 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 BMPR1BO00238 502 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 MFNGO00587 321 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 PLPP3O14495 311 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 DNPH1O43598 174 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 DLX1P56177 255 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 TNXAQ16473 311 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 HMGCLL1Q8TB92 370 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 CT55Q8WUE5 264 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 ELOA3CA0A087WX78 387 aaPredicted RBP8.58□□□□□ -1.04
CUX1-203ENST00000360264 CD40P25942 277 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 ECSCRQ19T08 205 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 ZNF547Q8IVP9 402 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 PRR7Q8TB68 274 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 WDFY2Q96P53 400 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 TMUB1Q9BVT8 246 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 TRPM7Q96QT4 1865 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.58□□□□□ -1.04
CUX1-203ENST00000360264 M0R3E3 92 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 RER1O15258 196 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 CRXO43186 299 aaPredicted RBP8.58□□□□□ -1.04
CUX1-203ENST00000360264 METTL26Q96S19 204 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 U3KQ87 197 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 IGHV1OR21-1A0A087WYE8 117 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 HELTA6NFD8 242 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 SEMG1P04279 462 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 AGERQ15109 404 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 STPG3Q8N7X2 389 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 OR2Y1Q8NGV0 311 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 HARBI1Q96MB7 349 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 ANGPTL4Q9BY76 406 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 RNF122Q9H9V4 155 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 Q9N2K0 584 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 PRRC2AP48634 2157 aaKnown RBP8.58□□□□□ -1.04
CUX1-203ENST00000360264 NEURL1O76050 574 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 ZNF770Q6IQ21 691 aaPredicted RBP8.58□□□□□ -1.04
CUX1-203ENST00000360264 C3orf80F5H4A9 247 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 GYPAP02724 150 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 ARG1P05089 322 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 GAMTQ14353 236 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 ZNF774Q6NX45 483 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 SPNS3Q6ZMD2 512 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 WDR13Q9H1Z4 485 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 C2CD3Q4AC94 2353 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 RSRP1Q9BUV0 290 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 WDR81Q562E7 1941 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 SRSF9Q13242 221 aaKnown RBP eCLIP8.57□□□□□ -1.04
CUX1-203ENST00000360264 EBLN2Q6P2I7 272 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 EXOGQ9Y2C4 368 aaKnown RBP8.57□□□□□ -1.04
CUX1-203ENST00000360264 ONECUT2O95948 504 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 AANATQ16613 207 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 ZBTB44Q8NCP5 570 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 MRGPRDQ8TDS7 321 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 PYCARD-AS1I3L0S3 204 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 CNTD2Q9H8S5 307 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 PCDHGA9Q9Y5G4 932 aaKnown RBP8.57□□□□□ -1.04
CUX1-203ENST00000360264 NDUFB6O95139 128 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 OLIG3Q7RTU3 272 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 PRDM7Q9NQW5 492 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 C11orf94C9JXX5 98 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 SFT2D2O95562 160 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 MPC2O95563 127 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 PPOXP50336 477 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 OR8I2Q8N0Y5 310 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 IL21Q9HBE4 155 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 C9orf170A2RU37 121 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 LYZL6O75951 148 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 CCR2P41597 374 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 TGIF2LYQ8IUE0 185 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 TGIF2LXQ8IUE1 241 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 CLEC5AQ9NY25 188 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 TMEM218A2RU14 115 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 PRSS1P07477 247 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 GMPPAQ96IJ6 420 aaPredicted RBP8.57□□□□□ -1.04
CUX1-203ENST00000360264 AVPR2P30518 371 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 METAP1P53582 386 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms