RNA–Protein interactions for RNA: ENST00000315050.11

TNIP1-201, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-201ENST00000315050 GPR35Q9HC97 309 aa10.91□□□□□ -0.66
TNIP1-201ENST00000315050 GLRX2Q9NS18 164 aa10.91□□□□□ -0.66
TNIP1-201ENST00000315050 IL36GQ9NZH8 169 aa10.91□□□□□ -0.66
TNIP1-201ENST00000315050 CRIM1Q9NZV1 1036 aa10.91□□□□□ -0.66
TNIP1-201ENST00000315050 MMP24Q9Y5R2 645 aa10.91□□□□□ -0.66
TNIP1-201ENST00000315050 LIPGQ9Y5X9 500 aa10.91□□□□□ -0.66
TNIP1-201ENST00000315050 TRAV20A0A0B4J274 112 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 IGKV1D-13A0A0B4J2D9 117 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 ZNF727A8MUV8 499 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 PROB1E7EW31 1015 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 ATXN7O15265 892 aaPredicted RBP10.9□□□□□ -0.66
TNIP1-201ENST00000315050 CDS2O95674 445 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 OR8U8P0C7N1 319 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 IGKV1-13P0DP09 117 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 CLDN15P56746 228 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 LFNGQ8NES3 379 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 RBFOX3A6NFN3 312 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 C3orf80F5H4A9 247 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 H3BP45 60 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 TMEM50AO95807 157 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 LMO1P25800 156 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 FOLR3P41439 243 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 DYNLT3P51808 116 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 PCBD1P61457 104 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 P4HA3Q7Z4N8 544 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 ZNF100Q8IYN0 542 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 OR2V1Q8NHB1 315 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 PLEKHF2Q9H8W4 249 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 GSN-AS1Q9NRJ2 163 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 CCL28Q9NRJ3 127 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 ZNF391Q9UJN7 358 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 URGCP-MRPS24S4R325 110 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 FREM1Q5H8C1 2179 aa10.9□□□□□ -0.66
TNIP1-201ENST00000315050 RPL36A-HNRNPH2H7BZ11 118 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 EPHA1P21709 976 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 RPS10P46783 165 aaKnown RBP10.89□□□□□ -0.67
TNIP1-201ENST00000315050 RND3P61587 244 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 SRYQ05066 204 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 SELENOHQ8IZQ5 122 aaKnown RBP10.89□□□□□ -0.67
TNIP1-201ENST00000315050 FAM86C1Q9NVL1 165 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 METTL1Q9UBP6 276 aaKnown RBP10.89□□□□□ -0.67
TNIP1-201ENST00000315050 H0YL77 283 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 WRBO00258 174 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 PITX3O75364 302 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 CYC1P08574 325 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 HOXB1P14653 301 aaPredicted RBP10.89□□□□□ -0.67
TNIP1-201ENST00000315050 GDF1P27539 372 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 SRPXP78539 464 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 ZNF154Q13106 437 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 HERPUD1Q15011 391 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 FAM209BQ5JX69 171 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 SPSB3Q6PJ21 355 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 KDF1Q8NAX2 398 aaPredicted RBP10.89□□□□□ -0.67
TNIP1-201ENST00000315050 SGCZQ96LD1 299 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 SPIN2AQ99865 258 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 SPIN2BQ9BPZ2 258 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 ZNF251Q9BRH9 671 aa10.89□□□□□ -0.67
TNIP1-201ENST00000315050 LYRM2Q9NU23 88 aaPredicted RBP10.89□□□□□ -0.67
TNIP1-201ENST00000315050 URB1O60287 2271 aaKnown RBP10.89□□□□□ -0.67
TNIP1-201ENST00000315050 SLC22A20A6NK97 555 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 PATE3B3GLJ2 98 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 H3BQ15 152 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 HSPA12AO43301 675 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 DNPH1O43598 174 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 CLN5O75503 358 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 IGHV2-5P01817 119 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 KRTAP27-1Q3LI81 207 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 WDR5BQ86VZ2 330 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 KCNE4Q8WWG9 221 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 CPNE4Q96A23 557 aaPredicted RBP10.88□□□□□ -0.67
TNIP1-201ENST00000315050 C11orf1Q9H5F2 150 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 DEPPQ9NTK1 212 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 SIT1Q9Y3P8 196 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 LRRC3CA6NJW4 275 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 CHST1O43916 411 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 HLA-HP01893 362 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 MMP7P09237 267 aaPredicted RBP10.88□□□□□ -0.67
TNIP1-201ENST00000315050 PRDX4Q13162 271 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 ZNF343Q6P1L6 599 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 TMEM56Q96MV1 263 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 FGF23Q9GZV9 251 aaPredicted RBP10.88□□□□□ -0.67
TNIP1-201ENST00000315050 SLC25A31Q9H0C2 315 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 Q9N2K0 584 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 MIOXQ9UGB7 285 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 TMEM56-RWDD3S4R434 201 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 TRIOBPQ9H2D6 2365 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 KIAA1549Q9HCM3 1950 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 NCKAP5O14513 1909 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 C5orf49A4QMS7 147 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 AP4M1O00189 453 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 TAGLN2P37802 199 aaKnown RBP10.88□□□□□ -0.67
TNIP1-201ENST00000315050 Q0VFX4 171 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 IZUMO4Q1ZYL8 232 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 ABLIM2Q6H8Q1 611 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 ODF3L1Q8IXM7 274 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 FAM185AQ8N0U4 392 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 IL22RA1Q8N6P7 574 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 CYB561D1Q8N8Q1 229 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 RAB39BQ96DA2 213 aa10.88□□□□□ -0.67
TNIP1-201ENST00000315050 SEBOXQ9HB31 216 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms