RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 B4GALT5O43286 388 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 UBL3O95164 117 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 KLK2P20151 261 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 RPS4Y1P22090 263 aaKnown RBP6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 CAPZBP47756 277 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 FAM74A3Q4VXF1 159 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 OTPQ5XKR4 325 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 RNF165Q6ZSG1 346 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 OVCH2Q7RTZ1 564 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 CADM3Q8N126 398 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 CSF3RQ99062 836 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 SLC25A51Q9H1U9 297 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 IGHV3-21A0A0B4J1V1 117 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 EDN1P05305 212 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 ALX1Q15699 326 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 SCGB3A1Q96QR1 104 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 METTL26Q96S19 204 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 EGLN1Q9GZT9 426 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 OR51M1Q9H341 326 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 HES2Q9Y543 173 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 C9orf172C9J069 976 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 UPK2O00526 184 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 ZNHIT1O43257 154 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 ZNF205O95201 554 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 HBZP02008 142 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 C6orf132Q5T0Z8 1188 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 IER5LQ5T953 404 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 VSIG10LQ86VR7 867 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 OR52N4Q8NGI2 321 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 OR52I2Q8NH67 350 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 OR10D3Q8NH80 312 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 FRRS1LQ9P0K9 344 aa6.79□□□□□ -1.32
LIMCH1-201ENST00000313860 CENPVL3A0A0U1RRI6 287 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 TCRBV16S1A1N1A0A5B0 115 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 TMEM212A6NML5 194 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 DHHO43323 396 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 SYNGR1O43759 233 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 HTN3P15516 51 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 UCP1P25874 307 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 DIO3P55073 304 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 DGCR2P98153 550 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 PMVKQ15126 192 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 ELAVL1Q15717 326 aaKnown RBP6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 HFEQ30201 348 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 PSAPL1Q6NUJ1 521 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 PTOV1Q86YD1 416 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 CLECL1Q8IZS7 167 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 OR5C1Q8NGR4 320 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 FAM222BQ8WU58 562 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 SPACA5Q96QH8 159 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 CD244Q9BZW8 370 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 TRAV8-3A0A0A6YYJ7 113 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 IGHV3-9P01782 118 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 GNG5P63218 68 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 C17orf67Q0P5P2 114 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 UNC119Q13432 240 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 C2orf82Q6UX34 121 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 IRF2BP1Q8IU81 584 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 F2RL3Q96RI0 385 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 C2orf88Q9BSF0 95 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 SLC17A9Q9BYT1 436 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 FZR1Q9UM11 496 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 TRBV20-1A0A075B6N2 111 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 A0A1W2PRS3 328 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 DAD1P61803 113 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 HAMPP81172 84 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 TMEM229BQ8NBD8 167 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 GHSRQ92847 366 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 JPT2Q9H910 190 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 PLEKHB1Q9UF11 243 aaPredicted RBP6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 TRBV9A0A0B4J1U6 114 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 UPK3AO75631 287 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 INHBBP09529 407 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 COX19Q49B96 90 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 PERPQ96FX8 193 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 THAP10Q9P2Z0 257 aaPredicted RBP6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 RIMS3Q9UJD0 308 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 PXMP4Q9Y6I8 212 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 LRRC37A3O60309 1634 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 BCL9LQ86UU0 1499 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 PGPEP1LA6NFU8 196 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 HMSDA8MTL9 139 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 EGR2P11161 476 aaPredicted RBP6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 LCN2P80188 198 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 FABP5Q01469 135 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 TAF10Q12962 218 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 TMEM176BQ3YBM2 270 aaPredicted RBP6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 Q6ZPB1 254 aaPredicted RBP6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 FAM214BQ7L5A3 538 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 EDARADDQ8WWZ3 215 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 HS3ST2Q9Y278 367 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 SLC5A6Q9Y289 635 aa6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 SIRT4Q9Y6E7 314 aaPredicted RBP6.78□□□□□ -1.32
LIMCH1-201ENST00000313860 M0R2P5 195 aa6.77□□□□□ -1.32
LIMCH1-201ENST00000313860 PEX7O00628 323 aa6.77□□□□□ -1.32
LIMCH1-201ENST00000313860 GALR3O60755 368 aaPredicted RBP6.77□□□□□ -1.32
LIMCH1-201ENST00000313860 IGHA1P01876 353 aa6.77□□□□□ -1.32
LIMCH1-201ENST00000313860 IGHA2P01877 340 aa6.77□□□□□ -1.32
LIMCH1-201ENST00000313860 VSIG10L2P0DP72 767 aa6.77□□□□□ -1.32
LIMCH1-201ENST00000313860 LRP10Q7Z4F1 713 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms