RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 MMP23AO75900 390 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 CDRT1O95170 752 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 CD1AP06126 327 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 FSTP19883 344 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 HTR1DP28221 377 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 KCNJ3P48549 501 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 DYNLT3P51808 116 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 PIGYQ3MUY2 71 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 NHLRC3Q5JS37 347 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 LDLRAD2Q5SZI1 272 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 C11orf88Q6PI97 169 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 TREML4Q6UXN2 200 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 OSR2Q8N2R0 312 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 ZNF565Q8N9K5 539 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 ZNF596Q8TC21 504 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 ORAI1Q96D31 301 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 ZNF184Q99676 751 aaPredicted RBP21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 NCOR1P1Q9H4R4 102 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 TCF7L1Q9HCS4 588 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 TCF19Q9Y242 345 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 ST3GAL6Q9Y274 331 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 HILPDAQ9Y5L2 63 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 TRAV24A0A0B4J272 114 aa21.35■■□□□ 1.01
CDKN2A-201ENST00000304494 PNMA8CA0A1B0GUJ8 204 aa21.35■■□□□ 1.01
CDKN2A-201ENST00000304494 KIR2DS4P43632 304 aa21.35■■□□□ 1.01
CDKN2A-201ENST00000304494 KRTAP10-3P60369 221 aa21.35■■□□□ 1.01
CDKN2A-201ENST00000304494 NANOGP1Q8N7R0 232 aa21.35■■□□□ 1.01
CDKN2A-201ENST00000304494 THRSPQ92748 146 aa21.35■■□□□ 1.01
CDKN2A-201ENST00000304494 OR14A2Q96R54 314 aa21.35■■□□□ 1.01
CDKN2A-201ENST00000304494 NKX3-1Q99801 234 aaPredicted RBP21.35■■□□□ 1.01
CDKN2A-201ENST00000304494 PPIL3Q9H2H8 161 aaKnown RBP21.35■■□□□ 1.01
CDKN2A-201ENST00000304494 TRBV5-7A0A0A0MS05 114 aa21.34■■□□□ 1.01
CDKN2A-201ENST00000304494 M0QZ24 198 aa21.34■■□□□ 1.01
CDKN2A-201ENST00000304494 CELP19835 753 aa21.34■■□□□ 1.01
CDKN2A-201ENST00000304494 RAB13P51153 203 aa21.34■■□□□ 1.01
CDKN2A-201ENST00000304494 PAX5Q02548 391 aa21.34■■□□□ 1.01
CDKN2A-201ENST00000304494 LINC00596Q86U02 117 aa21.34■■□□□ 1.01
CDKN2A-201ENST00000304494 OR2T6Q8NHC8 308 aa21.34■■□□□ 1.01
CDKN2A-201ENST00000304494 IFT22Q9H7X7 185 aa21.34■■□□□ 1.01
CDKN2A-201ENST00000304494 FOXJ3Q9UPW0 622 aa21.34■■□□□ 1.01
CDKN2A-201ENST00000304494 MEIKINA0A087WXM9 373 aa21.33■■□□□ 1.01
CDKN2A-201ENST00000304494 H3BUI4 141 aa21.33■■□□□ 1.01
CDKN2A-201ENST00000304494 F2RL2O00254 374 aa21.33■■□□□ 1.01
CDKN2A-201ENST00000304494 CHST1O43916 411 aa21.33■■□□□ 1.01
CDKN2A-201ENST00000304494 CD34P28906 385 aa21.33■■□□□ 1.01
CDKN2A-201ENST00000304494 RBM11P57052 281 aaKnown RBP21.33■■□□□ 1.01
CDKN2A-201ENST00000304494 BDH1Q02338 343 aa21.33■■□□□ 1.01
CDKN2A-201ENST00000304494 GPR176Q14439 515 aa21.33■■□□□ 1.01
CDKN2A-201ENST00000304494 RNLSQ5VYX0 342 aa21.33■■□□□ 1.01
CDKN2A-201ENST00000304494 OR4P4Q8NGL7 312 aa21.33■■□□□ 1.01
CDKN2A-201ENST00000304494 MYDGFQ969H8 173 aa21.33■■□□□ 1.01
CDKN2A-201ENST00000304494 CREB3L1Q96BA8 519 aa21.33■■□□□ 1.01
CDKN2A-201ENST00000304494 MND1Q9BWT6 205 aa21.33■■□□□ 1.01
CDKN2A-201ENST00000304494 SCN3BQ9NY72 215 aa21.33■■□□□ 1.01
CDKN2A-201ENST00000304494 DPM3Q9P2X0 92 aa21.33■■□□□ 1.01
CDKN2A-201ENST00000304494 TRAV8-7A0A075B6U6 113 aa21.32■■□□□ 1
CDKN2A-201ENST00000304494 KBTBD11-OT1A0A1B0GTJ5 212 aa21.32■■□□□ 1
CDKN2A-201ENST00000304494 A6NDX4 124 aa21.32■■□□□ 1
CDKN2A-201ENST00000304494 OR7C1O76099 320 aaPredicted RBP21.32■■□□□ 1
CDKN2A-201ENST00000304494 CDK1P06493 297 aa21.32■■□□□ 1
CDKN2A-201ENST00000304494 SERPINA2P20848 420 aa21.32■■□□□ 1
CDKN2A-201ENST00000304494 MAPK3P27361 379 aaPredicted RBP21.32■■□□□ 1
CDKN2A-201ENST00000304494 GLP1RP43220 463 aa21.32■■□□□ 1
CDKN2A-201ENST00000304494 GABPB1Q06547 395 aaPredicted RBP21.32■■□□□ 1
CDKN2A-201ENST00000304494 C6orf141Q5SZD1 244 aa21.32■■□□□ 1
CDKN2A-201ENST00000304494 BAIAP2L2Q6UXY1 529 aa21.32■■□□□ 1
CDKN2A-201ENST00000304494 CDH26Q8IXH8 852 aa21.32■■□□□ 1
CDKN2A-201ENST00000304494 DERL3Q96Q80 235 aa21.32■■□□□ 1
CDKN2A-201ENST00000304494 DPCDQ9BVM2 203 aaPredicted RBP21.32■■□□□ 1
CDKN2A-201ENST00000304494 KIF25Q9UIL4 384 aa21.32■■□□□ 1
CDKN2A-201ENST00000304494 PKD1L1Q8TDX9 2849 aa21.32■■□□□ 1
CDKN2A-201ENST00000304494 A0A087X0M5 115 aa21.31■■□□□ 1
CDKN2A-201ENST00000304494 A0A1B0GX30 115 aa21.31■■□□□ 1
CDKN2A-201ENST00000304494 TOR1AO14656 332 aa21.31■■□□□ 1
CDKN2A-201ENST00000304494 GTF2F2P13984 249 aa21.31■■□□□ 1
CDKN2A-201ENST00000304494 ARHGDIBP52566 201 aa21.31■■□□□ 1
CDKN2A-201ENST00000304494 EFNB2P52799 333 aa21.31■■□□□ 1
CDKN2A-201ENST00000304494 PRRX1P54821 245 aa21.31■■□□□ 1
CDKN2A-201ENST00000304494 AQP4P55087 323 aa21.31■■□□□ 1
CDKN2A-201ENST00000304494 DOC2BQ14184 412 aa21.31■■□□□ 1
CDKN2A-201ENST00000304494 C17orf58Q2M2W7 97 aa21.31■■□□□ 1
CDKN2A-201ENST00000304494 MPV17LQ2QL34 196 aa21.31■■□□□ 1
CDKN2A-201ENST00000304494 RSBN1Q5VWQ0 802 aaPredicted RBP21.31■■□□□ 1
CDKN2A-201ENST00000304494 JAGN1Q8N5M9 183 aa21.31■■□□□ 1
CDKN2A-201ENST00000304494 SUMF2Q8NBJ7 301 aa21.31■■□□□ 1
CDKN2A-201ENST00000304494 A0A1W2PPK0 400 aa21.3■■□□□ 1
CDKN2A-201ENST00000304494 MAGEA13PA6NCF6 341 aa21.3■■□□□ 1
CDKN2A-201ENST00000304494 LEUTXA8MZ59 168 aa21.3■■□□□ 1
CDKN2A-201ENST00000304494 PTGES3LE9PB15 166 aa21.3■■□□□ 1
CDKN2A-201ENST00000304494 IGLV1-47P01700 117 aa21.3■■□□□ 1
CDKN2A-201ENST00000304494 GDNFP39905 211 aa21.3■■□□□ 1
CDKN2A-201ENST00000304494 CEACAM3P40198 252 aa21.3■■□□□ 1
CDKN2A-201ENST00000304494 SLC22A6Q4U2R8 563 aa21.3■■□□□ 1
CDKN2A-201ENST00000304494 CCBE1Q6UXH8 406 aaPredicted RBP21.3■■□□□ 1
CDKN2A-201ENST00000304494 NRG4Q8WWG1 115 aa21.3■■□□□ 1
CDKN2A-201ENST00000304494 ZNF286AQ9HBT8 521 aa21.3■■□□□ 1
CDKN2A-201ENST00000304494 CALYQ9NYX4 217 aa21.3■■□□□ 1
CDKN2A-201ENST00000304494 FAM172BPA6NC97 362 aa21.29■■□□□ 1
CDKN2A-201ENST00000304494 GEMIN2O14893 280 aaKnown RBP21.29■■□□□ 1
CDKN2A-201ENST00000304494 CGB3P0DN86 165 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms