RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 OPN1MW3P0DN78 364 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 SSX2Q16385 188 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 TP53I3Q53FA7 332 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 ZNF626Q68DY1 528 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 RPL22L1Q6P5R6 122 aaKnown RBP12.1□□□□□ -0.47
UPK3A-201ENST00000216211 RDH10Q8IZV5 341 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 TPRX1Q8N7U7 411 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 OR11H6Q8NGC7 330 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 OR6Q1Q8NGQ2 317 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 RPS4Y2Q8TD47 263 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 EMG1Q92979 244 aaKnown RBP12.1□□□□□ -0.47
UPK3A-201ENST00000216211 TMEM203Q969S6 136 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 FOXRED1Q96CU9 486 aaPredicted RBP12.1□□□□□ -0.47
UPK3A-201ENST00000216211 MALSU1Q96EH3 234 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 PELI1Q96FA3 418 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 SNX22Q96L94 193 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 KCTD7Q96MP8 289 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 ZNF714Q96N38 554 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 CHST5Q9GZS9 411 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 ABCB10Q9NRK6 738 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 SERTAD4Q9NUC0 356 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 GNG8Q9UK08 70 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 LOC107986453A0A1B0GWG9 222 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 A6NDX4 124 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 HAND1O96004 215 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 SERPINA3P01011 423 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 IL1AP01583 271 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 RBP4P02753 201 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 CALCBP10092 127 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 CD28P10747 220 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 SOX6P35712 828 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 KIR3DL2P43630 455 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 MEF2CQ06413 473 aaPredicted RBP12.09□□□□□ -0.47
UPK3A-201ENST00000216211 CNN3Q15417 329 aaKnown RBP12.09□□□□□ -0.47
UPK3A-201ENST00000216211 BEAN1Q3B7T3 259 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 NSUN5P1Q3KNT7 163 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 KIAA2026Q5HYC2 2103 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 TMEM91Q6ZNR0 172 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 MS4A15Q8N5U1 240 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 OR52N4Q8NGI2 321 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 MCFD2Q8NI22 146 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 TMED9Q9BVK6 235 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 CHST6Q9GZX3 395 aa12.09□□□□□ -0.47
UPK3A-201ENST00000216211 RBFOX1Q9NWB1 397 aaKnown RBP12.09□□□□□ -0.47
UPK3A-201ENST00000216211 A0A075B6Q4 140 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 GABRPO00591 440 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 FBXO24O75426 580 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 UBCP0CG48 685 aaKnown RBP12.08□□□□□ -0.48
UPK3A-201ENST00000216211 BCL3P20749 454 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 GABRR1P24046 479 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 DUSP1P28562 367 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 RPS19P39019 145 aaKnown RBP12.08□□□□□ -0.48
UPK3A-201ENST00000216211 NPBWR2P48146 333 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 POU3F4P49335 361 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 ATP1B3P54709 279 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 SNU13P55769 128 aaKnown RBP12.08□□□□□ -0.48
UPK3A-201ENST00000216211 CDK5R1Q15078 307 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 GRK1Q15835 563 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 SAMD5Q5TGI4 173 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 C22orf42Q6IC83 251 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 FAM220AQ7Z4H9 259 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 Q8N2B8 174 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 ZNF676Q8N7Q3 588 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 DTX3Q8N9I9 347 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 CCDC54Q8NEL0 328 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 RNF166Q96A37 237 aaPredicted RBP12.08□□□□□ -0.48
UPK3A-201ENST00000216211 ADAT3Q96EY9 351 aaPredicted RBP12.08□□□□□ -0.48
UPK3A-201ENST00000216211 PGLYRP3Q96LB9 341 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 PLGRKTQ9HBL7 147 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 HILPDAQ9Y5L2 63 aa12.08□□□□□ -0.48
UPK3A-201ENST00000216211 IGKV1-9A0A0C4DH69 117 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 hADV38S2A0JD32 116 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 PSPNO60542 156 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 SC5DO75845 299 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 CDRT1O95170 752 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 PRB2P02812 416 aaPredicted RBP12.07□□□□□ -0.48
UPK3A-201ENST00000216211 PRKACAP17612 351 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 RBP2P50120 134 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 RORCP51449 518 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 Q6ZS46 218 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 Q8IYB0 196 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 FAM58AQ8N1B3 248 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 OR4S1Q8NGB4 309 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 S100ZQ8WXG8 99 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 PP6455Q8WZ26 134 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 GHSRQ92847 366 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 C10orf35Q96D05 121 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 SMIM19Q96E16 107 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 PRSS22Q9GZN4 317 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 PITPNC1Q9UKF7 332 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 LINC00312Q9Y6C7 94 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 SESN1Q9Y6P5 492 aa12.07□□□□□ -0.48
UPK3A-201ENST00000216211 IGHV2-26A0A0B4J1V2 119 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 TRBV2A0A0J9YWF9 115 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 F2RL2O00254 374 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 MMP23AO75900 390 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 CYB5AP00167 134 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 ATF1P18846 271 aa12.06□□□□□ -0.48
UPK3A-201ENST00000216211 AZGP1P25311 298 aaKnown RBP12.06□□□□□ -0.48
UPK3A-201ENST00000216211 DCTN2Q13561 401 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms