RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Ldlrad3A2AR95 345 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm21818J3KMS6 170 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Sh2d1bO35324 132 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Ntsr1O88319 424 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Egr3P43300 387 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr125Q14AJ9 320 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 H2-T22Q31615 379 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Znf250Q7TNU6 535 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Smim37Q8BT35 56 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Spem2Q8C5U4 503 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Phospho1Q8R2H9 267 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 RabepkQ8VCH5 380 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr1086Q8VFL9 310 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Snu13Q9D0T1 128 aaKnown RBP16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 D930007J09RikQ9D2K6 131 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Wdr4Q9EP82 413 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Mapk7Q9WVS8 806 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Rdh16f1E9Q9P8 317 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Hprt1P00493 218 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Amy1P00687 511 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Klk1b5P15945 261 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Id1P20067 168 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 SftpcP21841 193 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 FasP25446 327 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 PilrbQ2YFS2 224 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Csnk2a1Q60737 391 aaKnown RBP16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Glra1Q64018 457 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Rdh9Q8K5C8 317 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr1138Q8VFQ9 311 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 OcstampQ9D611 498 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Fam219aQ9D772 157 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 ApmapQ9D7N9 415 aa16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Eif3iQ9QZD9 325 aaKnown RBP16.46■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm15737D3YZR0 106 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr427E9Q7E7 315 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Zfp108E9Q8I5 642 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Vmn1r173E9Q8V7 313 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gm4778L7N229 365 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Wsb1O54927 421 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 FblP35550 327 aaKnown RBP16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 AtraidQ6PGD0 223 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Dtx3Q80V91 347 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Paqr7Q80ZE4 345 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Nsun5Q8K4F6 465 aaKnown RBP16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gpn1Q8VCE2 372 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Asb5Q9D1A4 329 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Samd8Q9DA37 478 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 1700020A23RikQ9DA59 131 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Ccr9Q9WUT7 369 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Ndufaf5A2APY7 343 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Nkx6-2D3Z4R4 277 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 H2-M1F7CXU4 344 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Zfand5O88878 213 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Itgb2P11835 771 aaKnown RBP16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Cnr1P47746 473 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Tex30Q3TUU5 225 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Wbp1lQ8BGW2 348 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Actrt3Q8BXF8 369 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr1132Q8VG97 308 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 PecrQ99MZ7 303 aa16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 CsQ9CZU6 464 aaKnown RBP16.45■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Rd3lB2RV38 197 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gm21981D3Z6Q6 369 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Mex3aG3UYU0 520 aaKnown RBP16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gfi1bO70237 330 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Wnt2bO70283 389 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 P04945 108 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Fgf4P11403 202 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Lsm6P62313 80 aaKnown RBP16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 CtseP70269 397 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 HgsnatQ3UDW8 656 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gm12258Q5NC63 627 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Zdhhc8Q5Y5T5 762 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Fam212bQ80VY2 300 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Cacfd1Q8BG21 171 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 ArsjQ8BM89 598 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 9230110F15RikQ9D262 117 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Nat8Q9JIY7 227 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Ighv1-43A0A0A6YXN5 117 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Prrt2E9PUL5 346 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Saa2P05367 122 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Zfp26P10076 861 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Hoxb1P17919 297 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Sirt6P59941 334 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Atf1P81269 269 aaKnown RBP16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Spatc1Q148B6 480 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 DdiasQ6NZG4 898 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr1131Q7TR45 309 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gpr153Q8K0Z9 631 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr1393Q8VFA7 311 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Ms4a8Q99N10 290 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Htra3Q9D236 459 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Emc9Q9DB76 206 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Nprl2Q9WUE4 380 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gm5493S4R2D1 92 aa16.44■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr721-ps1A0A140T8T9 324 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gm16368A0A1Y7VNG9 144 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr1410E9PYK6 323 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Rabl2E9Q9D5 223 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Zfp760E9QAF5 666 aa16.43■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms