RNA–Protein interactions for RNA: YOR332W

VMA4, Transcript of Subunit E of the V1 domain of the vacuolar H+-ATPase (V-ATPase), yeast

Gene VMA4, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA4	YOR332W	VMA3	P25515	160 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	PWP2	P25635	923 aa	Known RBP	6.24	□□□□□ -1.41
VMA4	YOR332W	MLF3	P32047	452 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	YKU70	P32807	602 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	UGA4	P32837	571 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	YKL222C	P35995	705 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	SET3	P36124	751 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	NCL1	P38205	684 aa	Known RBP	6.24	□□□□□ -1.41
VMA4	YOR332W	CST26	P38226	397 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	FZO1	P38297	855 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	VHC1	P38329	1120 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	HSM3	P38348	480 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	GPD2	P41911	440 aa	Known RBP	6.24	□□□□□ -1.41
VMA4	YOR332W	FMS1	P50264	508 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	DIP5	P53388	608 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	ATG16	Q03818	150 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	ARP6	Q12509	438 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	SRD1	P09007	221 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	YMR085W	P0CF18	432 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	CHS2	P14180	963 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	VMA4	P22203	233 aa	Known RBP	6.23	□□□□□ -1.41
VMA4	YOR332W	MLS1	P30952	554 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	CDC11	P32458	415 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	ZUO1	P32527	433 aa	Known RBP	6.23	□□□□□ -1.41
VMA4	YOR332W	YBL055C	P34220	418 aa	Predicted RBP	6.23	□□□□□ -1.41
VMA4	YOR332W	ERT1	P38140	529 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	MGE1	P38523	228 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	SIP5	P40210	489 aa	Known RBP	6.23	□□□□□ -1.41
VMA4	YOR332W	ASG1	P40467	964 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	EAF6	P47128	113 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	ZIP2	P53061	704 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	NNF2	P53253	936 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	YGR111W	P53265	400 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	TIM8	P57744	87 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	SPO19	Q03029	223 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	YDR222W	Q04925	415 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	DON1	Q05610	365 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
VMA4	YOR332W	RKM4	Q12504	494 aa		6.23	□□□□□ -1.41
VMA4	YOR332W	FKS1	P38631	1876 aa	Known RBP	6.23	□□□□□ -1.41
VMA4	YOR332W	THS1	P04801	734 aa	Known RBP	6.22	□□□□□ -1.41
VMA4	YOR332W	CTT1	P06115	562 aa		6.22	□□□□□ -1.41
VMA4	YOR332W	CDC33	P07260	213 aa	Known RBP	6.22	□□□□□ -1.41
VMA4	YOR332W	CLB4	P24871	460 aa		6.22	□□□□□ -1.41
VMA4	YOR332W	TPS2	P31688	896 aa	Known RBP	6.22	□□□□□ -1.41
VMA4	YOR332W	DBF4	P32325	704 aa		6.22	□□□□□ -1.41
VMA4	YOR332W	YSC83	P32792	385 aa		6.22	□□□□□ -1.41
VMA4	YOR332W	PGM1	P33401	570 aa	Known RBP	6.22	□□□□□ -1.41
VMA4	YOR332W	AHP1	P38013	176 aa	Known RBP	6.22	□□□□□ -1.41
VMA4	YOR332W	YTA12	P40341	825 aa		6.22	□□□□□ -1.41
VMA4	YOR332W	YJR115W	P47152	169 aa		6.22	□□□□□ -1.41
VMA4	YOR332W	VPS4	P52917	437 aa		6.22	□□□□□ -1.41
VMA4	YOR332W	ERP6	P53198	216 aa		6.22	□□□□□ -1.41
VMA4	YOR332W	YNL144C	P53907	740 aa		6.22	□□□□□ -1.41
VMA4	YOR332W	ALD6	P54115	500 aa	Known RBP	6.22	□□□□□ -1.41
VMA4	YOR332W	GPI13	Q07830	1017 aa		6.22	□□□□□ -1.41
VMA4	YOR332W	GRX6	Q12438	231 aa		6.22	□□□□□ -1.41
VMA4	YOR332W	GSC2	P40989	1895 aa		6.22	□□□□□ -1.41
VMA4	YOR332W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	6.21	□□□□□ -1.42	not detected
VMA4	YOR332W	PWP1	P21304	576 aa	Known RBP	6.21	□□□□□ -1.42
VMA4	YOR332W	ICL1	P28240	557 aa	Predicted RBP	6.21	□□□□□ -1.42
VMA4	YOR332W	DPH5	P32469	300 aa	Predicted RBP	6.21	□□□□□ -1.42
VMA4	YOR332W	EFB1	P32471	206 aa	Known RBP	6.21	□□□□□ -1.42
VMA4	YOR332W	UBP11	P36026	717 aa		6.21	□□□□□ -1.42
VMA4	YOR332W	LDH1	P38139	375 aa		6.21	□□□□□ -1.42
VMA4	YOR332W	UBP13	P38187	747 aa		6.21	□□□□□ -1.42
VMA4	YOR332W	RFC3	P38629	340 aa		6.21	□□□□□ -1.42
VMA4	YOR332W	YMR134W	P40207	237 aa		6.21	□□□□□ -1.42
VMA4	YOR332W	YTA6	P40328	754 aa		6.21	□□□□□ -1.42
VMA4	YOR332W	QDR2	P40474	542 aa		6.21	□□□□□ -1.42
VMA4	YOR332W	UBP6	P43593	499 aa	Known RBP	6.21	□□□□□ -1.42
VMA4	YOR332W	ARI1	P53111	347 aa	Known RBP	6.21	□□□□□ -1.42
VMA4	YOR332W	HUL5	P53119	910 aa		6.21	□□□□□ -1.42
VMA4	YOR332W	CDC53	Q12018	815 aa	Known RBP	6.21	□□□□□ -1.42
VMA4	YOR332W	SLX4	Q12098	748 aa		6.21	□□□□□ -1.42
VMA4	YOR332W	RRG1	Q12167	365 aa	Predicted RBP	6.21	□□□□□ -1.42
VMA4	YOR332W	MNL2	Q12205	849 aa		6.21	□□□□□ -1.42
VMA4	YOR332W	OCA6	Q12454	224 aa		6.21	□□□□□ -1.42
VMA4	YOR332W	RAD10	P06838	210 aa		6.2	□□□□□ -1.42
VMA4	YOR332W	ADE3	P07245	946 aa	Known RBP	6.2	□□□□□ -1.42
VMA4	YOR332W	TCP1	P12612	559 aa	Known RBP	6.2	□□□□□ -1.42
VMA4	YOR332W	REC107	P21651	314 aa		6.2	□□□□□ -1.42
VMA4	YOR332W	ADP1	P25371	1049 aa		6.2	□□□□□ -1.42
VMA4	YOR332W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	6.2	□□□□□ -1.42	not detected
VMA4	YOR332W	TFC3	P34111	1160 aa		6.2	□□□□□ -1.42
VMA4	YOR332W	DYS1	P38791	387 aa		6.2	□□□□□ -1.42
VMA4	YOR332W	SPC97	P38863	823 aa		6.2	□□□□□ -1.42
VMA4	YOR332W	PMC1	P38929	1173 aa	Predicted RBP	6.2	□□□□□ -1.42
VMA4	YOR332W	FIS1	P40515	155 aa		6.2	□□□□□ -1.42
VMA4	YOR332W	RPS0B	P46654	252 aa	Known RBP	6.2	□□□□□ -1.42
VMA4	YOR332W	PHO86	P46956	311 aa		6.2	□□□□□ -1.42
VMA4	YOR332W	DAS1	P47005	663 aa		6.2	□□□□□ -1.42
VMA4	YOR332W	TAF6	P53040	516 aa		6.2	□□□□□ -1.42
VMA4	YOR332W	CNM67	P53865	581 aa	Known RBP	6.2	□□□□□ -1.42
VMA4	YOR332W	YMR027W	Q04371	470 aa		6.2	□□□□□ -1.42
VMA4	YOR332W	UFO1	Q04511	668 aa		6.2	□□□□□ -1.42
VMA4	YOR332W	ERV41	Q04651	352 aa		6.2	□□□□□ -1.42
VMA4	YOR332W	GTB1	Q04924	702 aa		6.2	□□□□□ -1.42
VMA4	YOR332W	MDM38	Q08179	573 aa		6.2	□□□□□ -1.42
VMA4	YOR332W	LAP2	Q10740	671 aa		6.2	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 78.7 ms