RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeast

Gene UBC7, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC7	YMR022W	ORM2	Q06144	216 aa		3.18	□□□□□ -1.9
UBC7	YMR022W	THI22	Q06490	572 aa		3.18	□□□□□ -1.9
UBC7	YMR022W	FEN2	P25621	512 aa	Known RBP	3.17	□□□□□ -1.9
UBC7	YMR022W	PET127	P32606	800 aa		3.17	□□□□□ -1.9
UBC7	YMR022W	TMT1	P32643	299 aa		3.17	□□□□□ -1.9
UBC7	YMR022W	MNN4	P36044	1178 aa		3.17	□□□□□ -1.9
UBC7	YMR022W	SET3	P36124	751 aa		3.17	□□□□□ -1.9
UBC7	YMR022W	SSZ1	P38788	538 aa	Known RBP	3.17	□□□□□ -1.9
UBC7	YMR022W	LTP1	P40347	161 aa		3.17	□□□□□ -1.9
UBC7	YMR022W	BUD6	P41697	788 aa		3.17	□□□□□ -1.9
UBC7	YMR022W	YMR210W	Q03649	449 aa		3.17	□□□□□ -1.9
UBC7	YMR022W	PPN1	Q04119	674 aa		3.17	□□□□□ -1.9
UBC7	YMR022W	ATG33	Q06485	197 aa		3.17	□□□□□ -1.9
UBC7	YMR022W	IRC3	Q06683	689 aa		3.17	□□□□□ -1.9
UBC7	YMR022W	SFL1	P20134	766 aa		3.16	□□□□□ -1.9
UBC7	YMR022W	UBS1	P38290	277 aa		3.16	□□□□□ -1.9
UBC7	YMR022W	PMC1	P38929	1173 aa	Predicted RBP	3.16	□□□□□ -1.9
UBC7	YMR022W	YNL195C	P40168	261 aa		3.16	□□□□□ -1.9
UBC7	YMR022W	YIL077C	P40508	320 aa		3.16	□□□□□ -1.9
UBC7	YMR022W	YJR039W	P47107	1121 aa		3.16	□□□□□ -1.9
UBC7	YMR022W	AIM14	P53109	570 aa		3.16	□□□□□ -1.9
UBC7	YMR022W	NMA2	P53204	395 aa		3.16	□□□□□ -1.9
UBC7	YMR022W	DIP5	P53388	608 aa		3.16	□□□□□ -1.9
UBC7	YMR022W	UFO1	Q04511	668 aa		3.16	□□□□□ -1.9
UBC7	YMR022W	GUD1	Q07729	489 aa		3.16	□□□□□ -1.9
UBC7	YMR022W	LAM4	P38800	1345 aa		3.16	□□□□□ -1.9
UBC7	YMR022W	FRS1	P15624	595 aa	Known RBP	3.15	□□□□□ -1.91
UBC7	YMR022W	NUP1	P20676	1076 aa		3.15	□□□□□ -1.91
UBC7	YMR022W	MEF1	P25039	761 aa		3.15	□□□□□ -1.91
UBC7	YMR022W	PCL2	P25693	308 aa		3.15	□□□□□ -1.91
UBC7	YMR022W	AKL1	P38080	1108 aa	Known RBP	3.15	□□□□□ -1.91
UBC7	YMR022W	COS111	P38308	924 aa		3.15	□□□□□ -1.91
UBC7	YMR022W	PIH1	P38768	344 aa		3.15	□□□□□ -1.91
UBC7	YMR022W	KHA1	P40309	873 aa		3.15	□□□□□ -1.91
UBC7	YMR022W	NET1	P47035	1189 aa		3.15	□□□□□ -1.91
UBC7	YMR022W	CEF1	Q03654	590 aa	Predicted RBP	3.15	□□□□□ -1.91
UBC7	YMR022W	FPR4	Q06205	392 aa	Predicted RBP	3.15	□□□□□ -1.91
UBC7	YMR022W	ULA1	Q12059	462 aa		3.15	□□□□□ -1.91
UBC7	YMR022W	PGK1	P00560	416 aa	Known RBP	3.14	□□□□□ -1.91
UBC7	YMR022W	YMC2	P38087	329 aa		3.14	□□□□□ -1.91
UBC7	YMR022W	PCM1	P38628	557 aa	Known RBP	3.14	□□□□□ -1.91
UBC7	YMR022W	OCA5	P38738	679 aa		3.14	□□□□□ -1.91
UBC7	YMR022W	RIM4	P38741	713 aa		3.14	□□□□□ -1.91
UBC7	YMR022W	XBP1	P40489	647 aa		3.14	□□□□□ -1.91
UBC7	YMR022W	PXA1	P41909	870 aa		3.14	□□□□□ -1.91
UBC7	YMR022W	RFX1	P48743	811 aa		3.14	□□□□□ -1.91
UBC7	YMR022W	BRE5	P53741	515 aa	Known RBP	3.14	□□□□□ -1.91
UBC7	YMR022W	ARP4	P80428	489 aa		3.14	□□□□□ -1.91
UBC7	YMR022W	YFT2	Q06676	274 aa		3.14	□□□□□ -1.91
UBC7	YMR022W	OSW1	Q08692	278 aa		3.14	□□□□□ -1.91
UBC7	YMR022W	RKI1	Q12189	258 aa		3.14	□□□□□ -1.91
UBC7	YMR022W	TPK2	P06245	380 aa		3.13	□□□□□ -1.91
UBC7	YMR022W	HMG1	P12683	1054 aa		3.13	□□□□□ -1.91
UBC7	YMR022W	MIH1	P23748	554 aa		3.13	□□□□□ -1.91
UBC7	YMR022W	TDA3	P38758	523 aa		3.13	□□□□□ -1.91
UBC7	YMR022W	YHR097C	P38809	366 aa	Known RBP	3.13	□□□□□ -1.91
UBC7	YMR022W	BIT61	P47041	543 aa		3.13	□□□□□ -1.91
UBC7	YMR022W	ASN1	P49089	572 aa	Known RBP	3.13	□□□□□ -1.91
UBC7	YMR022W	YDR179W-A	Q03983	463 aa		3.13	□□□□□ -1.91
UBC7	YMR022W	VPS36	Q06696	566 aa		3.13	□□□□□ -1.91
UBC7	YMR022W	PHO5	P00635	467 aa		3.12	□□□□□ -1.91
UBC7	YMR022W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
UBC7	YMR022W	MRPL9	P31334	269 aa		3.12	□□□□□ -1.91
UBC7	YMR022W	PPG1	P32838	368 aa		3.12	□□□□□ -1.91
UBC7	YMR022W	GAT1	P43574	510 aa		3.12	□□□□□ -1.91
UBC7	YMR022W	SDA1	P53313	767 aa	Known RBP	3.12	□□□□□ -1.91
UBC7	YMR022W	GFD1	Q04839	188 aa	Known RBP	3.12	□□□□□ -1.91
UBC7	YMR022W	NTG2	Q08214	380 aa		3.12	□□□□□ -1.91
UBC7	YMR022W	IMG2	P25642	146 aa	Predicted RBP	3.11	□□□□□ -1.91
UBC7	YMR022W	SEC6	P32844	805 aa		3.11	□□□□□ -1.91
UBC7	YMR022W	ELF1	P36053	145 aa		3.11	□□□□□ -1.91
UBC7	YMR022W	BNA3	P47039	444 aa	Known RBP	3.11	□□□□□ -1.91
UBC7	YMR022W	SPO1	P53541	631 aa		3.11	□□□□□ -1.91
UBC7	YMR022W	YNL193W	P53870	558 aa		3.11	□□□□□ -1.91
UBC7	YMR022W	LEE1	Q02799	301 aa	Known RBP	3.11	□□□□□ -1.91
UBC7	YMR022W	TFB2	Q02939	513 aa		3.11	□□□□□ -1.91
UBC7	YMR022W	UTP14	Q04500	899 aa	Known RBP	3.11	□□□□□ -1.91
UBC7	YMR022W	YDL073W	Q07454	984 aa		3.11	□□□□□ -1.91
UBC7	YMR022W	YPL216W	Q08964	1102 aa		3.11	□□□□□ -1.91
UBC7	YMR022W	DCS2	Q12123	353 aa		3.11	□□□□□ -1.91
UBC7	YMR022W	APN1	P22936	367 aa		3.1	□□□□□ -1.91
UBC7	YMR022W	YMC1	P32331	307 aa		3.1	□□□□□ -1.91
UBC7	YMR022W	DHR2	P36009	735 aa	Predicted RBP	3.1	□□□□□ -1.91
UBC7	YMR022W	DUN1	P39009	513 aa		3.1	□□□□□ -1.91
UBC7	YMR022W	NUG1	P40010	520 aa	Known RBP	3.1	□□□□□ -1.91
UBC7	YMR022W	RET2	P43621	546 aa		3.1	□□□□□ -1.91
UBC7	YMR022W	TAX4	P47030	604 aa		3.1	□□□□□ -1.91
UBC7	YMR022W	TRS23	Q03784	219 aa		3.1	□□□□□ -1.91
UBC7	YMR022W	ENT2	Q05785	613 aa		3.1	□□□□□ -1.91
UBC7	YMR022W	RGC1	Q06108	1083 aa	Known RBP	3.1	□□□□□ -1.91
UBC7	YMR022W	TGS1	Q12052	315 aa		3.1	□□□□□ -1.91
UBC7	YMR022W	LOT5	P34234	306 aa		3.09	□□□□□ -1.91
UBC7	YMR022W	APD1	P38281	316 aa		3.09	□□□□□ -1.91
UBC7	YMR022W	PPE1	P38796	400 aa		3.09	□□□□□ -1.91
UBC7	YMR022W	MFM1	Q02783	413 aa		3.09	□□□□□ -1.91
UBC7	YMR022W	YLR407W	Q06070	228 aa		3.09	□□□□□ -1.91
UBC7	YMR022W	RGT2	Q12300	763 aa		3.09	□□□□□ -1.91
UBC7	YMR022W	ZPS1	Q12512	249 aa		3.09	□□□□□ -1.91
UBC7	YMR022W	YMR084W	A2P2R3	262 aa		3.08	□□□□□ -1.92
UBC7	YMR022W	HEM1	P09950	548 aa	Predicted RBP	3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms