RNA–Protein interactions for RNA: YML010W

SPT5, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeast

Gene SPT5, Length 3,192 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT5	YML010W	AVT1	P47082	602 aa		13.55	□□□□□ -0.24
SPT5	YML010W	HSH155	P49955	971 aa	Known RBP	13.55	□□□□□ -0.24
SPT5	YML010W	CDC73	Q06697	393 aa		13.55	□□□□□ -0.24
SPT5	YML010W	NSE1	Q07913	336 aa		13.55	□□□□□ -0.24
SPT5	YML010W	EXO70	P19658	623 aa		13.55	□□□□□ -0.24
SPT5	YML010W	RNR1	P21524	888 aa	Known RBP	13.55	□□□□□ -0.24
SPT5	YML010W	NUF2	P33895	451 aa		13.55	□□□□□ -0.24
SPT5	YML010W	SET3	P36124	751 aa		13.55	□□□□□ -0.24
SPT5	YML010W	NUP60	P39705	539 aa		13.55	□□□□□ -0.24
SPT5	YML010W	PRK1	P40494	810 aa		13.55	□□□□□ -0.24
SPT5	YML010W	RNY1	Q02933	434 aa	Known RBP	13.55	□□□□□ -0.24
SPT5	YML010W	TUB2	P02557	457 aa	Known RBP	13.54	□□□□□ -0.24
SPT5	YML010W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	13.54	□□□□□ -0.24	not detected
SPT5	YML010W	AFG2	P32794	780 aa		13.54	□□□□□ -0.24
SPT5	YML010W	UGA4	P32837	571 aa		13.54	□□□□□ -0.24
SPT5	YML010W	TGL4	P36165	910 aa		13.54	□□□□□ -0.24
SPT5	YML010W	INP2	Q03824	705 aa		13.54	□□□□□ -0.24
SPT5	YML010W	IVY1	Q04934	453 aa		13.54	□□□□□ -0.24
SPT5	YML010W	TUB3	P09734	445 aa	Known RBP	13.54	□□□□□ -0.24
SPT5	YML010W	PHO86	P46956	311 aa		13.54	□□□□□ -0.24
SPT5	YML010W	KAR9	P32526	644 aa		13.53	□□□□□ -0.24
SPT5	YML010W	PCA1	P38360	1216 aa		13.53	□□□□□ -0.24
SPT5	YML010W	IOC2	Q12072	812 aa		13.53	□□□□□ -0.24
SPT5	YML010W	BI2	P03873	423 aa		13.53	□□□□□ -0.24
SPT5	YML010W	BI4	P03879	638 aa		13.53	□□□□□ -0.24
SPT5	YML010W	TIF1	P10081	395 aa	Known RBP	13.53	□□□□□ -0.24
SPT5	YML010W	CDC48	P25694	835 aa	Known RBP	13.53	□□□□□ -0.24
SPT5	YML010W	APM2	P38700	605 aa		13.53	□□□□□ -0.24
SPT5	YML010W	MPH1	P40562	993 aa		13.53	□□□□□ -0.24
SPT5	YML010W	PRM6	Q04705	352 aa		13.53	□□□□□ -0.24
SPT5	YML010W	ORM2	Q06144	216 aa		13.53	□□□□□ -0.24
SPT5	YML010W	BI3	Q9ZZW7	517 aa		13.53	□□□□□ -0.24
SPT5	YML010W	PDX3	P38075	228 aa	Known RBP	13.53	□□□□□ -0.24
SPT5	YML010W	SLM4	P38247	162 aa		13.53	□□□□□ -0.24
SPT5	YML010W	DIA4	P38705	446 aa	Predicted RBP	13.53	□□□□□ -0.24
SPT5	YML010W	ICL1	P28240	557 aa	Predicted RBP	13.52	□□□□□ -0.24
SPT5	YML010W	DSE1	P40077	573 aa		13.52	□□□□□ -0.24
SPT5	YML010W	KHA1	P40309	873 aa		13.52	□□□□□ -0.24
SPT5	YML010W	MAM33	P40513	266 aa		13.52	□□□□□ -0.24
SPT5	YML010W	FIS1	P40515	155 aa		13.52	□□□□□ -0.24
SPT5	YML010W	CRD1	Q07560	283 aa		13.52	□□□□□ -0.24
SPT5	YML010W	TEF1	P02994	458 aa	Known RBP	13.52	□□□□□ -0.25
SPT5	YML010W	CUR1	Q06469	252 aa		13.52	□□□□□ -0.25
SPT5	YML010W	SPE4	Q12455	300 aa		13.52	□□□□□ -0.25
SPT5	YML010W	SEM1	O94742	89 aa		13.51	□□□□□ -0.25
SPT5	YML010W	VPH2	P32341	215 aa		13.51	□□□□□ -0.25
SPT5	YML010W	IRE1	P32361	1115 aa		13.51	□□□□□ -0.25
SPT5	YML010W	SIP2	P34164	415 aa	Known RBP	13.51	□□□□□ -0.25
SPT5	YML010W	CUE2	P36075	443 aa	Known RBP	13.51	□□□□□ -0.25
SPT5	YML010W	MSR1	P38714	643 aa		13.51	□□□□□ -0.25
SPT5	YML010W	ADY3	Q07732	790 aa		13.51	□□□□□ -0.25
SPT5	YML010W	RRG1	Q12167	365 aa	Predicted RBP	13.51	□□□□□ -0.25
SPT5	YML010W	TSC10	P38342	320 aa		13.51	□□□□□ -0.25
SPT5	YML010W	IAH1	P41734	238 aa		13.51	□□□□□ -0.25
SPT5	YML010W	CNM67	P53865	581 aa	Known RBP	13.51	□□□□□ -0.25
SPT5	YML010W	YET2	Q04210	160 aa		13.51	□□□□□ -0.25
SPT5	YML010W	RRP15	Q06511	250 aa	Predicted RBP	13.51	□□□□□ -0.25
SPT5	YML010W	TUB1	P09733	447 aa	Known RBP	13.51	□□□□□ -0.25
SPT5	YML010W	SPR3	P41901	512 aa		13.51	□□□□□ -0.25
SPT5	YML010W	YJL045W	P47052	634 aa		13.51	□□□□□ -0.25
SPT5	YML010W	MIG2	P53035	382 aa		13.51	□□□□□ -0.25
SPT5	YML010W	TEL2	P53038	688 aa		13.51	□□□□□ -0.25
SPT5	YML010W	MRM2	P53123	320 aa		13.51	□□□□□ -0.25
SPT5	YML010W	BCP1	Q06338	283 aa		13.51	□□□□□ -0.25
SPT5	YML010W	PMA1	P05030	918 aa	Known RBP	13.5	□□□□□ -0.25
SPT5	YML010W	URA4	P20051	364 aa		13.5	□□□□□ -0.25
SPT5	YML010W	CDC20	P26309	610 aa		13.5	□□□□□ -0.25
SPT5	YML010W	ATG19	P35193	415 aa		13.5	□□□□□ -0.25
SPT5	YML010W	STL1	P39932	569 aa		13.5	□□□□□ -0.25
SPT5	YML010W	SBE2	P42223	864 aa	Known RBP	13.5	□□□□□ -0.25
SPT5	YML010W	SHE10	P53075	577 aa		13.5	□□□□□ -0.25
SPT5	YML010W	HMO1	Q03973	246 aa	Known RBP	13.5	□□□□□ -0.25
SPT5	YML010W	NOC3	Q07896	663 aa	Predicted RBP	13.5	□□□□□ -0.25
SPT5	YML010W	PDC5	P16467	563 aa	Known RBP	13.5	□□□□□ -0.25
SPT5	YML010W	MSB1	P21339	1137 aa	Known RBP	13.5	□□□□□ -0.25
SPT5	YML010W	URA7	P28274	579 aa	Known RBP	13.5	□□□□□ -0.25
SPT5	YML010W	ADI1	Q03677	179 aa		13.5	□□□□□ -0.25
SPT5	YML010W	PGK1	P00560	416 aa	Known RBP	13.49	□□□□□ -0.25
SPT5	YML010W	ADE3	P07245	946 aa	Known RBP	13.49	□□□□□ -0.25
SPT5	YML010W	MPH2	P0CD99	609 aa		13.49	□□□□□ -0.25
SPT5	YML010W	FTR1	P40088	404 aa		13.49	□□□□□ -0.25
SPT5	YML010W	MAD3	P47074	515 aa		13.49	□□□□□ -0.25
SPT5	YML010W	YJL206C	P39529	758 aa		13.49	□□□□□ -0.25
SPT5	YML010W	SAE2	P46946	345 aa		13.49	□□□□□ -0.25
SPT5	YML010W	YSH1	Q06224	779 aa	Predicted RBP	13.49	□□□□□ -0.25
SPT5	YML010W	MDM20	Q12387	796 aa	Known RBP	13.49	□□□□□ -0.25
SPT5	YML010W	DYS1	P38791	387 aa		13.48	□□□□□ -0.25
SPT5	YML010W	FAR3	P46671	204 aa		13.48	□□□□□ -0.25
SPT5	YML010W	DCP2	P53550	970 aa	Known RBP	13.48	□□□□□ -0.25
SPT5	YML010W	SVF1	Q05515	481 aa		13.48	□□□□□ -0.25
SPT5	YML010W	YLR326W	Q06170	240 aa	Known RBP	13.48	□□□□□ -0.25
SPT5	YML010W	IWR1	Q07532	353 aa	Predicted RBP	13.48	□□□□□ -0.25
SPT5	YML010W	ADE2	P21264	571 aa	Known RBP	13.48	□□□□□ -0.25
SPT5	YML010W	CHS6	P40955	746 aa		13.48	□□□□□ -0.25
SPT5	YML010W	NAT1	P12945	854 aa	Known RBP	13.48	□□□□□ -0.25
SPT5	YML010W	CDC42	P19073	191 aa		13.48	□□□□□ -0.25
SPT5	YML010W	FLC2	P39719	783 aa		13.48	□□□□□ -0.25
SPT5	YML010W	SAW1	P39735	261 aa		13.48	□□□□□ -0.25
SPT5	YML010W	YJL171C	P46992	396 aa		13.48	□□□□□ -0.25
SPT5	YML010W	LIF1	P53150	421 aa		13.48	□□□□□ -0.25

Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms