RNA–Protein interactions for RNA: YLR254C

NDL1, Transcript of Homolog of nuclear distribution factor NudE, yeast

Gene NDL1, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDL1	YLR254C	PHO5	P00635	467 aa		4.69	□□□□□ -1.66
NDL1	YLR254C	HMG1	P12683	1054 aa		4.69	□□□□□ -1.66
NDL1	YLR254C	SFL1	P20134	766 aa		4.69	□□□□□ -1.66
NDL1	YLR254C	APN1	P22936	367 aa		4.69	□□□□□ -1.66
NDL1	YLR254C	SFP1	P32432	683 aa		4.69	□□□□□ -1.66
NDL1	YLR254C	YKR018C	P36114	725 aa		4.69	□□□□□ -1.66
NDL1	YLR254C	PCM1	P38628	557 aa	Known RBP	4.69	□□□□□ -1.66
NDL1	YLR254C	MIT1	P40002	666 aa		4.69	□□□□□ -1.66
NDL1	YLR254C	TAX4	P47030	604 aa		4.69	□□□□□ -1.66
NDL1	YLR254C	AIM14	P53109	570 aa		4.69	□□□□□ -1.66
NDL1	YLR254C	PCL10	P53124	433 aa		4.69	□□□□□ -1.66
NDL1	YLR254C	ATG33	Q06485	197 aa		4.69	□□□□□ -1.66
NDL1	YLR254C	YLR001C	Q07895	862 aa		4.69	□□□□□ -1.66
NDL1	YLR254C	LAM4	P38800	1345 aa		4.69	□□□□□ -1.66
NDL1	YLR254C	RPL8A	P17076	256 aa	Known RBP	4.68	□□□□□ -1.66
NDL1	YLR254C	PRP28	P23394	588 aa		4.68	□□□□□ -1.66
NDL1	YLR254C	BIT2	P38346	545 aa		4.68	□□□□□ -1.66
NDL1	YLR254C	GID8	P40208	455 aa		4.68	□□□□□ -1.66
NDL1	YLR254C	RSC8	P43609	557 aa	Known RBP	4.68	□□□□□ -1.66
NDL1	YLR254C	ASN1	P49089	572 aa	Known RBP	4.68	□□□□□ -1.66
NDL1	YLR254C	YNL193W	P53870	558 aa		4.68	□□□□□ -1.66
NDL1	YLR254C	UTP14	Q04500	899 aa	Known RBP	4.68	□□□□□ -1.66
NDL1	YLR254C	THI22	Q06490	572 aa		4.68	□□□□□ -1.66
NDL1	YLR254C	GIN4	Q12263	1142 aa		4.68	□□□□□ -1.66
NDL1	YLR254C	CHS5	Q12114	671 aa	Known RBP	4.67	□□□□□ -1.66
NDL1	YLR254C	MDM20	Q12387	796 aa	Known RBP	4.67	□□□□□ -1.66
NDL1	YLR254C	MET13	P53128	600 aa		4.66	□□□□□ -1.66
NDL1	YLR254C	SDA1	P53313	767 aa	Known RBP	4.66	□□□□□ -1.66
NDL1	YLR254C	LEE1	Q02799	301 aa	Known RBP	4.66	□□□□□ -1.66
NDL1	YLR254C	GUD1	Q07729	489 aa		4.66	□□□□□ -1.66
NDL1	YLR254C	ULA1	Q12059	462 aa		4.66	□□□□□ -1.66
NDL1	YLR254C	APL3	P38065	1025 aa		4.65	□□□□□ -1.67
NDL1	YLR254C	MPS3	P47069	682 aa		4.65	□□□□□ -1.67
NDL1	YLR254C	BPL1	P48445	690 aa	Predicted RBP	4.65	□□□□□ -1.67
NDL1	YLR254C	ARP4	P80428	489 aa		4.65	□□□□□ -1.67
NDL1	YLR254C	BMS1	Q08965	1183 aa	Known RBP	4.65	□□□□□ -1.67
NDL1	YLR254C	ADR1	P07248	1323 aa		4.65	□□□□□ -1.67
NDL1	YLR254C	MNN4	P36044	1178 aa		4.64	□□□□□ -1.67
NDL1	YLR254C	APN2	P38207	520 aa		4.64	□□□□□ -1.67
NDL1	YLR254C	MGS1	P40151	587 aa		4.64	□□□□□ -1.67
NDL1	YLR254C	PMT6	P42934	759 aa		4.64	□□□□□ -1.67
NDL1	YLR254C	DNM1	P54861	757 aa		4.64	□□□□□ -1.67
NDL1	YLR254C	HFD1	Q04458	532 aa		4.64	□□□□□ -1.67
NDL1	YLR254C	FEN2	P25621	512 aa	Known RBP	4.63	□□□□□ -1.67
NDL1	YLR254C	YUR1	P26725	428 aa		4.63	□□□□□ -1.67
NDL1	YLR254C	CTP1	P38152	299 aa		4.63	□□□□□ -1.67
NDL1	YLR254C	FPR3	P38911	411 aa	Known RBP	4.63	□□□□□ -1.67
NDL1	YLR254C	KHA1	P40309	873 aa		4.63	□□□□□ -1.67
NDL1	YLR254C	SET2	P46995	733 aa	Known RBP	4.63	□□□□□ -1.67
NDL1	YLR254C	RFX1	P48743	811 aa		4.63	□□□□□ -1.67
NDL1	YLR254C	DIP5	P53388	608 aa		4.63	□□□□□ -1.67
NDL1	YLR254C	YIL077C	P40508	320 aa		4.62	□□□□□ -1.67
NDL1	YLR254C	HLJ1	P48353	224 aa		4.62	□□□□□ -1.67
NDL1	YLR254C	BRE5	P53741	515 aa	Known RBP	4.62	□□□□□ -1.67
NDL1	YLR254C	YSH1	Q06224	779 aa	Predicted RBP	4.62	□□□□□ -1.67
NDL1	YLR254C	TPK2	P06245	380 aa		4.61	□□□□□ -1.67
NDL1	YLR254C	SEC6	P32844	805 aa		4.61	□□□□□ -1.67
NDL1	YLR254C	SSZ1	P38788	538 aa	Known RBP	4.61	□□□□□ -1.67
NDL1	YLR254C	YJR142W	P47173	342 aa		4.61	□□□□□ -1.67
NDL1	YLR254C	STP1	Q00947	519 aa		4.61	□□□□□ -1.67
NDL1	YLR254C	ISA1	Q07821	250 aa	Predicted RBP	4.61	□□□□□ -1.67
NDL1	YLR254C	RKI1	Q12189	258 aa		4.61	□□□□□ -1.67
NDL1	YLR254C	YGR161W-C	Q3E744	92 aa		4.61	□□□□□ -1.67
NDL1	YLR254C	HOT13	P36078	116 aa		4.6	□□□□□ -1.67
NDL1	YLR254C	CCT5	P40413	562 aa	Known RBP	4.6	□□□□□ -1.67
NDL1	YLR254C	STB2	P46679	850 aa		4.6	□□□□□ -1.67
NDL1	YLR254C	YJR039W	P47107	1121 aa		4.6	□□□□□ -1.67
NDL1	YLR254C	GPD1	Q00055	391 aa	Known RBP	4.6	□□□□□ -1.67
NDL1	YLR254C	DCS2	Q12123	353 aa		4.6	□□□□□ -1.67
NDL1	YLR254C	NTH1	P32356	751 aa		4.59	□□□□□ -1.67
NDL1	YLR254C	MAL31	P38156	614 aa		4.59	□□□□□ -1.67
NDL1	YLR254C	TDA9	Q04545	1251 aa		4.59	□□□□□ -1.67
NDL1	YLR254C	THI73	Q07904	523 aa		4.59	□□□□□ -1.67
NDL1	YLR254C	CIR2	Q08822	631 aa		4.59	□□□□□ -1.67
NDL1	YLR254C	AI5_ALPHA	Q9ZZX1	630 aa		4.59	□□□□□ -1.67
NDL1	YLR254C	SEC15	P22224	910 aa		4.58	□□□□□ -1.68
NDL1	YLR254C	MBR1	P23493	339 aa		4.58	□□□□□ -1.68
NDL1	YLR254C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
NDL1	YLR254C	YKR075C	P36155	307 aa		4.58	□□□□□ -1.68
NDL1	YLR254C	TDA3	P38758	523 aa		4.58	□□□□□ -1.68
NDL1	YLR254C	CKB2	P38930	258 aa		4.58	□□□□□ -1.68
NDL1	YLR254C	ULP2	P40537	1034 aa	Predicted RBP	4.58	□□□□□ -1.68
NDL1	YLR254C	YJR096W	P47137	282 aa		4.58	□□□□□ -1.68
NDL1	YLR254C	DOS2	P54858	310 aa		4.58	□□□□□ -1.68
NDL1	YLR254C	NGL2	Q03264	515 aa	Known RBP	4.58	□□□□□ -1.68
NDL1	YLR254C	YDR179W-A	Q03983	463 aa		4.58	□□□□□ -1.68
NDL1	YLR254C	AIM44	Q99299	758 aa		4.58	□□□□□ -1.68
NDL1	YLR254C	NUP145	P49687	1317 aa		4.57	□□□□□ -1.68
NDL1	YLR254C	AAD3	P25612	363 aa		4.57	□□□□□ -1.68
NDL1	YLR254C	PRP19	P32523	503 aa	Known RBP	4.57	□□□□□ -1.68
NDL1	YLR254C	AKL1	P38080	1108 aa	Known RBP	4.57	□□□□□ -1.68
NDL1	YLR254C	COS111	P38308	924 aa		4.57	□□□□□ -1.68
NDL1	YLR254C	YHR202W	P38887	602 aa		4.57	□□□□□ -1.68
NDL1	YLR254C	RET2	P43621	546 aa		4.57	□□□□□ -1.68
NDL1	YLR254C	BFA1	P47113	574 aa		4.57	□□□□□ -1.68
NDL1	YLR254C	PMT3	P47190	753 aa		4.57	□□□□□ -1.68
NDL1	YLR254C	YNR029C	P53729	429 aa	Known RBP	4.57	□□□□□ -1.68
NDL1	YLR254C	UFO1	Q04511	668 aa		4.57	□□□□□ -1.68
NDL1	YLR254C	ARG7	Q04728	441 aa		4.57	□□□□□ -1.68
NDL1	YLR254C	VPS36	Q06696	566 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms