RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C YMC2P38087 329 aa4.49□□□□□ -1.69
ATG38YLR211C CTP1P38152 299 aa4.49□□□□□ -1.69
ATG38YLR211C KHA1P40309 873 aa4.49□□□□□ -1.69
ATG38YLR211C YJR096WP47137 282 aa4.49□□□□□ -1.69
ATG38YLR211C NMA2P53204 395 aa4.49□□□□□ -1.69
ATG38YLR211C GPD1Q00055 391 aaKnown RBP4.49□□□□□ -1.69
ATG38YLR211C COQ11Q05892 277 aa4.49□□□□□ -1.69
ATG38YLR211C YLR407WQ06070 228 aa4.49□□□□□ -1.69
ATG38YLR211C YFT2Q06676 274 aa4.49□□□□□ -1.69
ATG38YLR211C YDL086WQ07505 273 aa4.49□□□□□ -1.69
ATG38YLR211C MDM10P18409 493 aa4.48□□□□□ -1.69
ATG38YLR211C PET127P32606 800 aa4.48□□□□□ -1.69
ATG38YLR211C COS111P38308 924 aa4.48□□□□□ -1.69
ATG38YLR211C MUP3P38734 546 aa4.48□□□□□ -1.69
ATG38YLR211C MNN1P39106 762 aa4.48□□□□□ -1.69
ATG38YLR211C THI7Q05998 598 aa4.48□□□□□ -1.69
ATG38YLR211C PHO5P00635 467 aa4.47□□□□□ -1.69
ATG38YLR211C ERG20P08524 352 aaKnown RBP4.47□□□□□ -1.69
ATG38YLR211C PAC2P39937 518 aa4.47□□□□□ -1.69
ATG38YLR211C SDA1P53313 767 aaKnown RBP4.47□□□□□ -1.69
ATG38YLR211C SNF12P53628 566 aa4.47□□□□□ -1.69
ATG38YLR211C YNL162W-AQ3E7A8 72 aa4.47□□□□□ -1.69
ATG38YLR211C LAM4P38800 1345 aa4.46□□□□□ -1.69
ATG38YLR211C RPN13O13563 156 aa4.46□□□□□ -1.7
ATG38YLR211C SWI6P09959 803 aa4.46□□□□□ -1.7
ATG38YLR211C MAL31P38156 614 aa4.46□□□□□ -1.7
ATG38YLR211C BUD8P41698 603 aa4.46□□□□□ -1.7
ATG38YLR211C STP4Q07351 490 aa4.46□□□□□ -1.7
ATG38YLR211C RKI1Q12189 258 aa4.46□□□□□ -1.7
ATG38YLR211C RPS21BQ3E754 87 aaKnown RBP4.46□□□□□ -1.7
ATG38YLR211C ADR1P07248 1323 aa4.46□□□□□ -1.7
ATG38YLR211C KCC4P25389 1037 aa4.45□□□□□ -1.7
ATG38YLR211C CKB2P38930 258 aa4.45□□□□□ -1.7
ATG38YLR211C RET2P43621 546 aa4.45□□□□□ -1.7
ATG38YLR211C SPC98P53540 846 aa4.45□□□□□ -1.7
ATG38YLR211C ORC1P54784 914 aaPredicted RBP4.45□□□□□ -1.7
ATG38YLR211C YMR210WQ03649 449 aa4.45□□□□□ -1.7
ATG38YLR211C IZH3Q07959 543 aa4.45□□□□□ -1.7
ATG38YLR211C BMS1Q08965 1183 aaKnown RBP4.45□□□□□ -1.7
ATG38YLR211C STE12P13574 688 aa4.44□□□□□ -1.7
ATG38YLR211C ABF1P14164 731 aa4.44□□□□□ -1.7
ATG38YLR211C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
ATG38YLR211C HXT6P39003 570 aaKnown RBP4.44□□□□□ -1.7
ATG38YLR211C HXT7P39004 570 aa4.44□□□□□ -1.7
ATG38YLR211C MRK1P50873 501 aa4.44□□□□□ -1.7
ATG38YLR211C YSH1Q06224 779 aaPredicted RBP4.44□□□□□ -1.7
ATG38YLR211C MRI1Q06489 411 aaKnown RBP4.44□□□□□ -1.7
ATG38YLR211C OSW1Q08692 278 aa4.44□□□□□ -1.7
ATG38YLR211C KIN82P25341 720 aa4.43□□□□□ -1.7
ATG38YLR211C SFP1P32432 683 aa4.43□□□□□ -1.7
ATG38YLR211C YKR075CP36155 307 aa4.43□□□□□ -1.7
ATG38YLR211C TDA3P38758 523 aa4.43□□□□□ -1.7
ATG38YLR211C CCT5P40413 562 aaKnown RBP4.43□□□□□ -1.7
ATG38YLR211C ASN1P49089 572 aaKnown RBP4.43□□□□□ -1.7
ATG38YLR211C DIP5P53388 608 aa4.43□□□□□ -1.7
ATG38YLR211C VBA4Q04602 768 aaKnown RBP4.43□□□□□ -1.7
ATG38YLR211C RPS17AP02407 136 aaKnown RBP4.42□□□□□ -1.7
ATG38YLR211C RPS9BP05755 195 aaKnown RBP4.42□□□□□ -1.7
ATG38YLR211C RPS17BP14127 136 aaKnown RBP4.42□□□□□ -1.7
ATG38YLR211C YMC1P32331 307 aa4.42□□□□□ -1.7
ATG38YLR211C PRP19P32523 503 aaKnown RBP4.42□□□□□ -1.7
ATG38YLR211C ELF1P36053 145 aa4.42□□□□□ -1.7
ATG38YLR211C PMC1P38929 1173 aaPredicted RBP4.42□□□□□ -1.7
ATG38YLR211C NOP15P53927 220 aaPredicted RBP4.42□□□□□ -1.7
ATG38YLR211C ECM9Q02202 377 aa4.42□□□□□ -1.7
ATG38YLR211C THI73Q07904 523 aa4.42□□□□□ -1.7
ATG38YLR211C VPS34P22543 875 aa4.41□□□□□ -1.7
ATG38YLR211C TYS1P36421 394 aaKnown RBP4.41□□□□□ -1.7
ATG38YLR211C FAT1P38225 669 aa4.41□□□□□ -1.7
ATG38YLR211C NMD2P38798 1089 aaKnown RBP4.41□□□□□ -1.7
ATG38YLR211C PMT6P42934 759 aa4.41□□□□□ -1.7
ATG38YLR211C GPG1P53130 126 aa4.41□□□□□ -1.7
ATG38YLR211C MTQ2Q03920 221 aaPredicted RBP4.41□□□□□ -1.7
ATG38YLR211C YDR179W-AQ03983 463 aa4.41□□□□□ -1.7
ATG38YLR211C STE4P18851 423 aa4.4□□□□□ -1.71
ATG38YLR211C SAT4P25333 603 aaKnown RBP4.4□□□□□ -1.71
ATG38YLR211C APL3P38065 1025 aa4.4□□□□□ -1.71
ATG38YLR211C CDS1P38221 457 aa4.4□□□□□ -1.71
ATG38YLR211C PXA1P41909 870 aa4.4□□□□□ -1.71
ATG38YLR211C IES1P43579 692 aa4.4□□□□□ -1.71
ATG38YLR211C HFD1Q04458 532 aa4.4□□□□□ -1.71
ATG38YLR211C UFO1Q04511 668 aa4.4□□□□□ -1.71
ATG38YLR211C RPS21AP0C0V8 87 aaKnown RBP4.39□□□□□ -1.71
ATG38YLR211C TUP1P16649 713 aa4.39□□□□□ -1.71
ATG38YLR211C SEC15P22224 910 aa4.39□□□□□ -1.71
ATG38YLR211C SEC65P29478 273 aa4.39□□□□□ -1.71
ATG38YLR211C PRE4P30657 266 aa4.39□□□□□ -1.71
ATG38YLR211C NTH1P32356 751 aa4.39□□□□□ -1.71
ATG38YLR211C OAF3P36023 863 aa4.39□□□□□ -1.71
ATG38YLR211C CRG1P38892 291 aaRIP-Chip data4.39□□□□□ -1.71not detected
ATG38YLR211C TMN3P40071 706 aa4.39□□□□□ -1.71
ATG38YLR211C YJR142WP47173 342 aa4.39□□□□□ -1.71
ATG38YLR211C YGR153WP48238 217 aa4.39□□□□□ -1.71
ATG38YLR211C HLJ1P48353 224 aa4.39□□□□□ -1.71
ATG38YLR211C TIM50Q02776 476 aa4.39□□□□□ -1.71
ATG38YLR211C HFI1Q12060 488 aa4.39□□□□□ -1.71
ATG38YLR211C TPK2P06245 380 aa4.38□□□□□ -1.71
ATG38YLR211C GLN4P13188 809 aaKnown RBP4.38□□□□□ -1.71
ATG38YLR211C HOM2P13663 365 aaKnown RBP4.38□□□□□ -1.71
ATG38YLR211C RPA135P22138 1203 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms