RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C TYS1P36421 394 aaKnown RBP5.42□□□□□ -1.54
RPF2YKR081C BIT61P47041 543 aa5.42□□□□□ -1.54
RPF2YKR081C YJR142WP47173 342 aa5.42□□□□□ -1.54
RPF2YKR081C PMT3P47190 753 aa5.42□□□□□ -1.54
RPF2YKR081C VBA4Q04602 768 aaKnown RBP5.42□□□□□ -1.54
RPF2YKR081C YLR407WQ06070 228 aa5.42□□□□□ -1.54
RPF2YKR081C TUB1P09733 447 aaKnown RBP5.41□□□□□ -1.54
RPF2YKR081C SEC15P22224 910 aa5.41□□□□□ -1.54
RPF2YKR081C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
RPF2YKR081C YKU70P32807 602 aa5.41□□□□□ -1.54
RPF2YKR081C SET3P36124 751 aa5.41□□□□□ -1.54
RPF2YKR081C CCT5P40413 562 aaKnown RBP5.41□□□□□ -1.54
RPF2YKR081C YGR153WP48238 217 aa5.41□□□□□ -1.54
RPF2YKR081C SWI6P09959 803 aa5.4□□□□□ -1.54
RPF2YKR081C ILV6P25605 309 aaKnown RBP5.4□□□□□ -1.54
RPF2YKR081C FUB1P25659 250 aa5.4□□□□□ -1.54
RPF2YKR081C YIL077CP40508 320 aa5.4□□□□□ -1.54
RPF2YKR081C MPS3P47069 682 aa5.4□□□□□ -1.54
RPF2YKR081C YGR151CP53287 111 aa5.4□□□□□ -1.54
RPF2YKR081C MTQ2Q03920 221 aaPredicted RBP5.4□□□□□ -1.54
RPF2YKR081C RPN13O13563 156 aa5.39□□□□□ -1.55
RPF2YKR081C PRP22P24384 1145 aaKnown RBP5.39□□□□□ -1.55
RPF2YKR081C NTH1P32356 751 aa5.39□□□□□ -1.55
RPF2YKR081C GMH1P36125 273 aa5.39□□□□□ -1.55
RPF2YKR081C CTP1P38152 299 aa5.39□□□□□ -1.55
RPF2YKR081C GZF3P42944 551 aaKnown RBP5.39□□□□□ -1.55
RPF2YKR081C RFX1P48743 811 aa5.39□□□□□ -1.55
RPF2YKR081C YNR029CP53729 429 aaKnown RBP5.39□□□□□ -1.55
RPF2YKR081C APM1Q00776 475 aaPredicted RBP5.39□□□□□ -1.55
RPF2YKR081C UME1Q03010 460 aa5.39□□□□□ -1.55
RPF2YKR081C YDL086WQ07505 273 aa5.39□□□□□ -1.55
RPF2YKR081C NUP145P49687 1317 aa5.39□□□□□ -1.55
RPF2YKR081C RPS9BP05755 195 aaKnown RBP5.38□□□□□ -1.55
RPF2YKR081C SPO11P23179 398 aa5.38□□□□□ -1.55
RPF2YKR081C COS111P38308 924 aa5.38□□□□□ -1.55
RPF2YKR081C RCR2Q03446 210 aaKnown RBP5.38□□□□□ -1.55
RPF2YKR081C YPS7Q06325 596 aa5.38□□□□□ -1.55
RPF2YKR081C YFT2Q06676 274 aa5.38□□□□□ -1.55
RPF2YKR081C BMS1Q08965 1183 aaKnown RBP5.38□□□□□ -1.55
RPF2YKR081C KCC4P25389 1037 aa5.37□□□□□ -1.55
RPF2YKR081C ADY2P25613 283 aa5.37□□□□□ -1.55
RPF2YKR081C EMP70P32802 667 aa5.37□□□□□ -1.55
RPF2YKR081C YEL020CP39994 560 aa5.37□□□□□ -1.55
RPF2YKR081C KHA1P40309 873 aa5.37□□□□□ -1.55
RPF2YKR081C IMO32P53219 342 aa5.37□□□□□ -1.55
RPF2YKR081C YSH1Q06224 779 aaPredicted RBP5.37□□□□□ -1.55
RPF2YKR081C YTM1Q12024 460 aaPredicted RBP5.37□□□□□ -1.55
RPF2YKR081C RPS17AP02407 136 aaKnown RBP5.36□□□□□ -1.55
RPF2YKR081C RPS17BP14127 136 aaKnown RBP5.36□□□□□ -1.55
RPF2YKR081C MDM10P18409 493 aa5.36□□□□□ -1.55
RPF2YKR081C IME1P21190 360 aa5.36□□□□□ -1.55
RPF2YKR081C SEC65P29478 273 aa5.36□□□□□ -1.55
RPF2YKR081C KSP1P38691 1029 aaKnown RBP5.36□□□□□ -1.55
RPF2YKR081C HXT6P39003 570 aaKnown RBP5.36□□□□□ -1.55
RPF2YKR081C HXT7P39004 570 aa5.36□□□□□ -1.55
RPF2YKR081C PXA1P41909 870 aa5.36□□□□□ -1.55
RPF2YKR081C NOP15P53927 220 aaPredicted RBP5.36□□□□□ -1.55
RPF2YKR081C DOS2P54858 310 aa5.36□□□□□ -1.55
RPF2YKR081C ECM9Q02202 377 aa5.36□□□□□ -1.55
RPF2YKR081C PPN1Q04119 674 aa5.36□□□□□ -1.55
RPF2YKR081C HFD1Q04458 532 aa5.36□□□□□ -1.55
RPF2YKR081C ARO10Q06408 635 aa5.36□□□□□ -1.55
RPF2YKR081C MSS1P32559 526 aaPredicted RBP5.35□□□□□ -1.55
RPF2YKR081C MUP3P38734 546 aa5.35□□□□□ -1.55
RPF2YKR081C YHR097CP38809 366 aaKnown RBP5.35□□□□□ -1.55
RPF2YKR081C OAF1P39720 1047 aaPredicted RBP5.35□□□□□ -1.55
RPF2YKR081C BUD8P41698 603 aa5.35□□□□□ -1.55
RPF2YKR081C MNN11P46985 422 aaKnown RBP5.35□□□□□ -1.55
RPF2YKR081C SPO1P53541 631 aa5.35□□□□□ -1.55
RPF2YKR081C COQ11Q05892 277 aa5.35□□□□□ -1.55
RPF2YKR081C RPS21BQ3E754 87 aaKnown RBP5.35□□□□□ -1.55
RPF2YKR081C YNL162W-AQ3E7A8 72 aa5.35□□□□□ -1.55
RPF2YKR081C APM4Q99186 491 aa5.35□□□□□ -1.55
RPF2YKR081C OAF3P36023 863 aa5.34□□□□□ -1.55
RPF2YKR081C DID4P36108 232 aa5.34□□□□□ -1.55
RPF2YKR081C APL3P38065 1025 aa5.34□□□□□ -1.55
RPF2YKR081C YGR237CP50089 785 aa5.34□□□□□ -1.55
RPF2YKR081C GPG1P53130 126 aa5.34□□□□□ -1.55
RPF2YKR081C SPC98P53540 846 aa5.34□□□□□ -1.55
RPF2YKR081C YHM2Q04013 314 aa5.34□□□□□ -1.55
RPF2YKR081C HOF1Q05080 669 aa5.34□□□□□ -1.55
RPF2YKR081C STP4Q07351 490 aa5.34□□□□□ -1.55
RPF2YKR081C AFT2Q08957 416 aa5.34□□□□□ -1.55
RPF2YKR081C HFI1Q12060 488 aa5.34□□□□□ -1.55
RPF2YKR081C FLO10P36170 1169 aa5.33□□□□□ -1.56
RPF2YKR081C DUN1P39009 513 aa5.33□□□□□ -1.56
RPF2YKR081C GPP1P41277 250 aaKnown RBP5.33□□□□□ -1.56
RPF2YKR081C IES1P43579 692 aa5.33□□□□□ -1.56
RPF2YKR081C PTA1Q01329 785 aaPredicted RBP5.33□□□□□ -1.56
RPF2YKR081C FAP7Q12055 197 aaPredicted RBP5.33□□□□□ -1.56
RPF2YKR081C RKI1Q12189 258 aa5.33□□□□□ -1.56
RPF2YKR081C MRK1P50873 501 aa5.32□□□□□ -1.56
RPF2YKR081C YGL081WP53156 320 aa5.32□□□□□ -1.56
RPF2YKR081C NMA2P53204 395 aa5.32□□□□□ -1.56
RPF2YKR081C NSE5Q03718 556 aa5.32□□□□□ -1.56
RPF2YKR081C IZH3Q07959 543 aa5.32□□□□□ -1.56
RPF2YKR081C LAM4P38800 1345 aa5.31□□□□□ -1.56
RPF2YKR081C PAC2P39937 518 aa5.31□□□□□ -1.56
RPF2YKR081C TAF4P50105 388 aa5.31□□□□□ -1.56
RPF2YKR081C THI7Q05998 598 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms