RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeast

Gene VMA21, Length 234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA21	YGR105W	YGR151C	P53287	111 aa		4.12	□□□□□ -1.75
VMA21	YGR105W	LGE1	Q02796	332 aa	Known RBP	4.12	□□□□□ -1.75
VMA21	YGR105W	YML122C	Q03207	126 aa		4.12	□□□□□ -1.75
VMA21	YGR105W	RCR2	Q03446	210 aa	Known RBP	4.12	□□□□□ -1.75
VMA21	YGR105W	YPS7	Q06325	596 aa		4.12	□□□□□ -1.75
VMA21	YGR105W	FUB1	P25659	250 aa		4.11	□□□□□ -1.75
VMA21	YGR105W	RIX1	P38883	763 aa	Predicted RBP	4.11	□□□□□ -1.75
VMA21	YGR105W	YIL166C	P40445	542 aa		4.11	□□□□□ -1.75
VMA21	YGR105W	MPS3	P47069	682 aa		4.11	□□□□□ -1.75
VMA21	YGR105W	MTQ2	Q03920	221 aa	Predicted RBP	4.11	□□□□□ -1.75
VMA21	YGR105W	RPS21B	Q3E754	87 aa	Known RBP	4.11	□□□□□ -1.75
VMA21	YGR105W	SEC15	P22224	910 aa		4.1	□□□□□ -1.75
VMA21	YGR105W	CUE2	P36075	443 aa	Known RBP	4.1	□□□□□ -1.75
VMA21	YGR105W	COS111	P38308	924 aa		4.1	□□□□□ -1.75
VMA21	YGR105W	YGR153W	P48238	217 aa		4.1	□□□□□ -1.75
VMA21	YGR105W	YNR029C	P53729	429 aa	Known RBP	4.1	□□□□□ -1.75
VMA21	YGR105W	VBA4	Q04602	768 aa	Known RBP	4.1	□□□□□ -1.75
VMA21	YGR105W	YFT2	Q06676	274 aa		4.1	□□□□□ -1.75
VMA21	YGR105W	YDL086W	Q07505	273 aa		4.1	□□□□□ -1.75
VMA21	YGR105W	YGR161W-C	Q3E744	92 aa		4.1	□□□□□ -1.75
VMA21	YGR105W	RPS9B	P05755	195 aa	Known RBP	4.09	□□□□□ -1.75
VMA21	YGR105W	TUB1	P09733	447 aa	Known RBP	4.09	□□□□□ -1.75
VMA21	YGR105W	SWI6	P09959	803 aa		4.09	□□□□□ -1.75
VMA21	YGR105W	KIN82	P25341	720 aa		4.09	□□□□□ -1.75
VMA21	YGR105W	ADY2	P25613	283 aa		4.09	□□□□□ -1.75
VMA21	YGR105W	MSS1	P32559	526 aa	Predicted RBP	4.09	□□□□□ -1.75
VMA21	YGR105W	GMH1	P36125	273 aa		4.09	□□□□□ -1.75
VMA21	YGR105W	FLO10	P36170	1169 aa		4.09	□□□□□ -1.75
VMA21	YGR105W	KSP1	P38691	1029 aa	Known RBP	4.09	□□□□□ -1.75
VMA21	YGR105W	KHA1	P40309	873 aa		4.09	□□□□□ -1.75
VMA21	YGR105W	NMA2	P53204	395 aa		4.09	□□□□□ -1.75
VMA21	YGR105W	ECM9	Q02202	377 aa		4.09	□□□□□ -1.75
VMA21	YGR105W	UME1	Q03010	460 aa		4.09	□□□□□ -1.75
VMA21	YGR105W	ABF1	P14164	731 aa		4.08	□□□□□ -1.76
VMA21	YGR105W	IME1	P21190	360 aa		4.08	□□□□□ -1.76
VMA21	YGR105W	SPO11	P23179	398 aa		4.08	□□□□□ -1.76
VMA21	YGR105W	CTP1	P38152	299 aa		4.08	□□□□□ -1.76
VMA21	YGR105W	HXT6	P39003	570 aa	Known RBP	4.08	□□□□□ -1.76
VMA21	YGR105W	HXT7	P39004	570 aa		4.08	□□□□□ -1.76
VMA21	YGR105W	YEL020C	P39994	560 aa		4.08	□□□□□ -1.76
VMA21	YGR105W	CCT5	P40413	562 aa	Known RBP	4.08	□□□□□ -1.76
VMA21	YGR105W	BUD8	P41698	603 aa		4.08	□□□□□ -1.76
VMA21	YGR105W	PMT3	P47190	753 aa		4.08	□□□□□ -1.76
VMA21	YGR105W	NUP145	P49687	1317 aa		4.08	□□□□□ -1.76
VMA21	YGR105W	SPC98	P53540	846 aa		4.08	□□□□□ -1.76
VMA21	YGR105W	NOP15	P53927	220 aa	Predicted RBP	4.08	□□□□□ -1.76
VMA21	YGR105W	APM1	Q00776	475 aa	Predicted RBP	4.08	□□□□□ -1.76
VMA21	YGR105W	ARO10	Q06408	635 aa		4.08	□□□□□ -1.76
VMA21	YGR105W	LAM4	P38800	1345 aa		4.07	□□□□□ -1.76
VMA21	YGR105W	RPS17A	P02407	136 aa	Known RBP	4.07	□□□□□ -1.76
VMA21	YGR105W	RPS17B	P14127	136 aa	Known RBP	4.07	□□□□□ -1.76
VMA21	YGR105W	KCC4	P25389	1037 aa		4.07	□□□□□ -1.76
VMA21	YGR105W	SEC65	P29478	273 aa		4.07	□□□□□ -1.76
VMA21	YGR105W	FPR3	P38911	411 aa	Known RBP	4.07	□□□□□ -1.76
VMA21	YGR105W	GPG1	P53130	126 aa		4.07	□□□□□ -1.76
VMA21	YGR105W	STP4	Q07351	490 aa		4.07	□□□□□ -1.76
VMA21	YGR105W	GLN4	P13188	809 aa	Known RBP	4.06	□□□□□ -1.76
VMA21	YGR105W	FAT1	P38225	669 aa		4.06	□□□□□ -1.76
VMA21	YGR105W	OAF1	P39720	1047 aa	Predicted RBP	4.06	□□□□□ -1.76
VMA21	YGR105W	GPP1	P41277	250 aa	Known RBP	4.06	□□□□□ -1.76
VMA21	YGR105W	PXA1	P41909	870 aa		4.06	□□□□□ -1.76
VMA21	YGR105W	GZF3	P42944	551 aa	Known RBP	4.06	□□□□□ -1.76
VMA21	YGR105W	DIP5	P53388	608 aa		4.06	□□□□□ -1.76
VMA21	YGR105W	YHM2	Q04013	314 aa		4.06	□□□□□ -1.76
VMA21	YGR105W	YSH1	Q06224	779 aa	Predicted RBP	4.06	□□□□□ -1.76
VMA21	YGR105W	YTM1	Q12024	460 aa	Predicted RBP	4.06	□□□□□ -1.76
VMA21	YGR105W	RPS21A	P0C0V8	87 aa	Known RBP	4.05	□□□□□ -1.76
VMA21	YGR105W	PRP22	P24384	1145 aa	Known RBP	4.05	□□□□□ -1.76
VMA21	YGR105W	NTH1	P32356	751 aa		4.05	□□□□□ -1.76
VMA21	YGR105W	OAF3	P36023	863 aa		4.05	□□□□□ -1.76
VMA21	YGR105W	DUN1	P39009	513 aa		4.05	□□□□□ -1.76
VMA21	YGR105W	YGR237C	P50089	785 aa		4.05	□□□□□ -1.76
VMA21	YGR105W	HFI1	Q12060	488 aa		4.05	□□□□□ -1.76
VMA21	YGR105W	RKI1	Q12189	258 aa		4.05	□□□□□ -1.76
VMA21	YGR105W	NDJ1	Q12366	352 aa		4.05	□□□□□ -1.76
VMA21	YGR105W	RPN13	O13563	156 aa		4.04	□□□□□ -1.76
VMA21	YGR105W	STE12	P13574	688 aa		4.04	□□□□□ -1.76
VMA21	YGR105W	ILV6	P25605	309 aa	Known RBP	4.04	□□□□□ -1.76
VMA21	YGR105W	ELF1	P36053	145 aa		4.04	□□□□□ -1.76
VMA21	YGR105W	APL3	P38065	1025 aa		4.04	□□□□□ -1.76
VMA21	YGR105W	YMC2	P38087	329 aa		4.04	□□□□□ -1.76
VMA21	YGR105W	MUP3	P38734	546 aa		4.04	□□□□□ -1.76
VMA21	YGR105W	MIT1	P40002	666 aa		4.04	□□□□□ -1.76
VMA21	YGR105W	TMN3	P40071	706 aa		4.04	□□□□□ -1.76
VMA21	YGR105W	MNN11	P46985	422 aa	Known RBP	4.04	□□□□□ -1.76
VMA21	YGR105W	IMO32	P53219	342 aa		4.04	□□□□□ -1.76
VMA21	YGR105W	HFD1	Q04458	532 aa		4.04	□□□□□ -1.76
VMA21	YGR105W	IZH3	Q07959	543 aa		4.04	□□□□□ -1.76
VMA21	YGR105W	BMS1	Q08965	1183 aa	Known RBP	4.04	□□□□□ -1.76
VMA21	YGR105W	FAP7	Q12055	197 aa	Predicted RBP	4.04	□□□□□ -1.76
VMA21	YGR105W	PHO5	P00635	467 aa		4.03	□□□□□ -1.76
VMA21	YGR105W	VID28	P40547	921 aa		4.03	□□□□□ -1.76
VMA21	YGR105W	IES1	P43579	692 aa		4.03	□□□□□ -1.76
VMA21	YGR105W	SNF12	P53628	566 aa		4.03	□□□□□ -1.76
VMA21	YGR105W	PRE4	P30657	266 aa		4.02	□□□□□ -1.77
VMA21	YGR105W	DID4	P36108	232 aa		4.02	□□□□□ -1.77
VMA21	YGR105W	PMT6	P42934	759 aa		4.02	□□□□□ -1.77
VMA21	YGR105W	TAF4	P50105	388 aa		4.02	□□□□□ -1.77
VMA21	YGR105W	SPO1	P53541	631 aa		4.02	□□□□□ -1.77
VMA21	YGR105W	PTA1	Q01329	785 aa	Predicted RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms