RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA7, Length 357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA7	YGR020C	GFA1	P14742	717 aa	Known RBP	4.81	□□□□□ -1.64
VMA7	YGR020C	KIN82	P25341	720 aa		4.81	□□□□□ -1.64
VMA7	YGR020C	DMC1	P25453	334 aa		4.81	□□□□□ -1.64
VMA7	YGR020C	FEN2	P25621	512 aa	Known RBP	4.81	□□□□□ -1.64
VMA7	YGR020C	SEC65	P29478	273 aa		4.81	□□□□□ -1.64
VMA7	YGR020C	TDP1	P38319	544 aa		4.81	□□□□□ -1.64
VMA7	YGR020C	HXT6	P39003	570 aa	Known RBP	4.81	□□□□□ -1.64
VMA7	YGR020C	HXT7	P39004	570 aa		4.81	□□□□□ -1.64
VMA7	YGR020C	OAF1	P39720	1047 aa	Predicted RBP	4.81	□□□□□ -1.64
VMA7	YGR020C	YIL077C	P40508	320 aa		4.81	□□□□□ -1.64
VMA7	YGR020C	GPP1	P41277	250 aa	Known RBP	4.81	□□□□□ -1.64
VMA7	YGR020C	CCT7	P42943	550 aa	Known RBP	4.81	□□□□□ -1.64
VMA7	YGR020C	MNN11	P46985	422 aa	Known RBP	4.81	□□□□□ -1.64
VMA7	YGR020C	VPS73	P53142	486 aa	Known RBP	4.81	□□□□□ -1.64
VMA7	YGR020C	YPS7	Q06325	596 aa		4.81	□□□□□ -1.64
VMA7	YGR020C	CHS5	Q12114	671 aa	Known RBP	4.81	□□□□□ -1.64
VMA7	YGR020C	RPS9B	P05755	195 aa	Known RBP	4.8	□□□□□ -1.64
VMA7	YGR020C	ABF1	P14164	731 aa		4.8	□□□□□ -1.64
VMA7	YGR020C	DID4	P36108	232 aa		4.8	□□□□□ -1.64
VMA7	YGR020C	UBS1	P38290	277 aa		4.8	□□□□□ -1.64
VMA7	YGR020C	YGL081W	P53156	320 aa		4.8	□□□□□ -1.64
VMA7	YGR020C	RCR2	Q03446	210 aa	Known RBP	4.8	□□□□□ -1.64
VMA7	YGR020C	YHM2	Q04013	314 aa		4.8	□□□□□ -1.64
VMA7	YGR020C	TAF3	Q12297	353 aa		4.8	□□□□□ -1.64
VMA7	YGR020C	RPS17A	P02407	136 aa	Known RBP	4.79	□□□□□ -1.64
VMA7	YGR020C	RPS17B	P14127	136 aa	Known RBP	4.79	□□□□□ -1.64
VMA7	YGR020C	HCA4	P20448	770 aa	Known RBP	4.79	□□□□□ -1.64
VMA7	YGR020C	PRP22	P24384	1145 aa	Known RBP	4.79	□□□□□ -1.64
VMA7	YGR020C	SET3	P36124	751 aa		4.79	□□□□□ -1.64
VMA7	YGR020C	COS111	P38308	924 aa		4.79	□□□□□ -1.64
VMA7	YGR020C	BDH2	P39713	417 aa		4.79	□□□□□ -1.64
VMA7	YGR020C	TAH11	P47112	604 aa		4.79	□□□□□ -1.64
VMA7	YGR020C	RFX1	P48743	811 aa		4.79	□□□□□ -1.64
VMA7	YGR020C	YGR151C	P53287	111 aa		4.79	□□□□□ -1.64
VMA7	YGR020C	NOP15	P53927	220 aa	Predicted RBP	4.79	□□□□□ -1.64
VMA7	YGR020C	PTA1	Q01329	785 aa	Predicted RBP	4.79	□□□□□ -1.64
VMA7	YGR020C	HFI1	Q12060	488 aa		4.79	□□□□□ -1.64
VMA7	YGR020C	SUT2	Q12286	268 aa		4.79	□□□□□ -1.64
VMA7	YGR020C	IME1	P21190	360 aa		4.78	□□□□□ -1.64
VMA7	YGR020C	OAF3	P36023	863 aa		4.78	□□□□□ -1.64
VMA7	YGR020C	DUN1	P39009	513 aa		4.78	□□□□□ -1.64
VMA7	YGR020C	UBP12	P39538	1254 aa		4.78	□□□□□ -1.64
VMA7	YGR020C	BUD8	P41698	603 aa		4.78	□□□□□ -1.64
VMA7	YGR020C	PXA1	P41909	870 aa		4.78	□□□□□ -1.64
VMA7	YGR020C	MPS3	P47069	682 aa		4.78	□□□□□ -1.64
VMA7	YGR020C	YFT2	Q06676	274 aa		4.78	□□□□□ -1.64
VMA7	YGR020C	YDL086W	Q07505	273 aa		4.78	□□□□□ -1.64
VMA7	YGR020C	FUB1	P25659	250 aa		4.77	□□□□□ -1.65
VMA7	YGR020C	NTH1	P32356	751 aa		4.77	□□□□□ -1.65
VMA7	YGR020C	CTP1	P38152	299 aa		4.77	□□□□□ -1.65
VMA7	YGR020C	PPN1	Q04119	674 aa		4.77	□□□□□ -1.65
VMA7	YGR020C	STP4	Q07351	490 aa		4.77	□□□□□ -1.65
VMA7	YGR020C	APM4	Q99186	491 aa		4.77	□□□□□ -1.65
VMA7	YGR020C	RPS21A	P0C0V8	87 aa	Known RBP	4.76	□□□□□ -1.65
VMA7	YGR020C	GLN4	P13188	809 aa	Known RBP	4.76	□□□□□ -1.65
VMA7	YGR020C	GMH1	P36125	273 aa		4.76	□□□□□ -1.65
VMA7	YGR020C	FAT1	P38225	669 aa		4.76	□□□□□ -1.65
VMA7	YGR020C	YHR097C	P38809	366 aa	Known RBP	4.76	□□□□□ -1.65
VMA7	YGR020C	KHA1	P40309	873 aa		4.76	□□□□□ -1.65
VMA7	YGR020C	YIL166C	P40445	542 aa		4.76	□□□□□ -1.65
VMA7	YGR020C	IES1	P43579	692 aa		4.76	□□□□□ -1.65
VMA7	YGR020C	YSH1	Q06224	779 aa	Predicted RBP	4.76	□□□□□ -1.65
VMA7	YGR020C	KSP1	P38691	1029 aa	Known RBP	4.75	□□□□□ -1.65
VMA7	YGR020C	YEN1	P40028	759 aa		4.75	□□□□□ -1.65
VMA7	YGR020C	SPO1	P53541	631 aa		4.75	□□□□□ -1.65
VMA7	YGR020C	KCC4	P25389	1037 aa		4.74	□□□□□ -1.65
VMA7	YGR020C	MSS1	P32559	526 aa	Predicted RBP	4.74	□□□□□ -1.65
VMA7	YGR020C	VID28	P40547	921 aa		4.74	□□□□□ -1.65
VMA7	YGR020C	TAF4	P50105	388 aa		4.74	□□□□□ -1.65
VMA7	YGR020C	NMA2	P53204	395 aa		4.74	□□□□□ -1.65
VMA7	YGR020C	GRX4	P32642	244 aa		4.73	□□□□□ -1.65
VMA7	YGR020C	EMP70	P32802	667 aa		4.73	□□□□□ -1.65
VMA7	YGR020C	PPZ2	P33329	710 aa		4.73	□□□□□ -1.65
VMA7	YGR020C	APL3	P38065	1025 aa		4.73	□□□□□ -1.65
VMA7	YGR020C	SPC98	P53540	846 aa		4.73	□□□□□ -1.65
VMA7	YGR020C	NSE5	Q03718	556 aa		4.73	□□□□□ -1.65
VMA7	YGR020C	BMS1	Q08965	1183 aa	Known RBP	4.73	□□□□□ -1.65
VMA7	YGR020C	SPO11	P23179	398 aa		4.72	□□□□□ -1.65
VMA7	YGR020C	PRE4	P30657	266 aa		4.72	□□□□□ -1.65
VMA7	YGR020C	DUG1	P43616	481 aa	Known RBP	4.72	□□□□□ -1.65
VMA7	YGR020C	DIP5	P53388	608 aa		4.72	□□□□□ -1.65
VMA7	YGR020C	APM1	Q00776	475 aa	Predicted RBP	4.72	□□□□□ -1.65
VMA7	YGR020C	IZH3	Q07959	543 aa		4.72	□□□□□ -1.65
VMA7	YGR020C	RKI1	Q12189	258 aa		4.72	□□□□□ -1.65
VMA7	YGR020C	RPN13	O13563	156 aa		4.71	□□□□□ -1.66
VMA7	YGR020C	CDC26	P14724	124 aa		4.71	□□□□□ -1.66
VMA7	YGR020C	DAL3	P32459	195 aa		4.71	□□□□□ -1.66
VMA7	YGR020C	YEL020C	P39994	560 aa		4.71	□□□□□ -1.66
VMA7	YGR020C	RNR4	P49723	345 aa	Known RBP	4.71	□□□□□ -1.66
VMA7	YGR020C	RMP1	Q12530	201 aa		4.71	□□□□□ -1.66
VMA7	YGR020C	LAM4	P38800	1345 aa		4.71	□□□□□ -1.66
VMA7	YGR020C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
VMA7	YGR020C	ADY2	P25613	283 aa		4.7	□□□□□ -1.66
VMA7	YGR020C	DGR2	P32330	852 aa		4.7	□□□□□ -1.66
VMA7	YGR020C	MF(ALPHA)2	P32435	120 aa		4.7	□□□□□ -1.66
VMA7	YGR020C	EUG1	P32474	517 aa		4.7	□□□□□ -1.66
VMA7	YGR020C	ELF1	P36053	145 aa		4.7	□□□□□ -1.66
VMA7	YGR020C	YHR033W	P38690	423 aa		4.7	□□□□□ -1.66
VMA7	YGR020C	CRG1	P38892	291 aa	RIP-Chip data	4.7	□□□□□ -1.66	not detected
VMA7	YGR020C	TMN3	P40071	706 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms