RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W TAH18Q12181 623 aa7.29□□□□□ -1.24
SNU71YGR013W SLP1Q12232 587 aa7.29□□□□□ -1.24
SNU71YGR013W FUR1P18562 216 aaKnown RBP7.28□□□□□ -1.24
SNU71YGR013W UBC1P21734 215 aaKnown RBP7.28□□□□□ -1.24
SNU71YGR013W NAR1P23503 491 aaKnown RBP7.28□□□□□ -1.24
SNU71YGR013W FLR1P38124 548 aa7.28□□□□□ -1.24
SNU71YGR013W ADE12P80210 433 aaKnown RBP7.28□□□□□ -1.24
SNU71YGR013W RCF1Q03713 159 aa7.28□□□□□ -1.24
SNU71YGR013W PSR1Q07800 427 aa7.28□□□□□ -1.24
SNU71YGR013W THI21Q08975 551 aa7.28□□□□□ -1.24
SNU71YGR013W YPL277CQ08989 487 aa7.28□□□□□ -1.24
SNU71YGR013W RRG1Q12167 365 aaPredicted RBP7.28□□□□□ -1.24
SNU71YGR013W YOR022CQ12204 715 aa7.28□□□□□ -1.24
SNU71YGR013W PGS1P25578 521 aa7.28□□□□□ -1.24
SNU71YGR013W RAD16P31244 790 aa7.28□□□□□ -1.24
SNU71YGR013W MAE1P36013 669 aaKnown RBP7.28□□□□□ -1.24
SNU71YGR013W BEM4P39011 633 aa7.28□□□□□ -1.24
SNU71YGR013W TPA1P40032 644 aaKnown RBP7.28□□□□□ -1.24
SNU71YGR013W BRE5P53741 515 aaKnown RBP7.28□□□□□ -1.24
SNU71YGR013W GIS4Q04233 774 aa7.28□□□□□ -1.24
SNU71YGR013W YDR461C-AQ2V2P7 80 aa7.28□□□□□ -1.24
SNU71YGR013W PRC1P00729 532 aa7.27□□□□□ -1.25
SNU71YGR013W NOT3P06102 836 aaKnown RBP7.27□□□□□ -1.25
SNU71YGR013W BCK2P33306 851 aa7.27□□□□□ -1.25
SNU71YGR013W PXA2P34230 853 aa7.27□□□□□ -1.25
SNU71YGR013W IFA38P38286 347 aa7.27□□□□□ -1.25
SNU71YGR013W LYS5P50113 272 aa7.27□□□□□ -1.25
SNU71YGR013W CBK1P53894 756 aa7.27□□□□□ -1.25
SNU71YGR013W OPT2Q06593 877 aa7.27□□□□□ -1.25
SNU71YGR013W RPS9AO13516 197 aaKnown RBP7.26□□□□□ -1.25
SNU71YGR013W SEM1O94742 89 aa7.26□□□□□ -1.25
SNU71YGR013W LEU2P04173 364 aaPredicted RBP7.26□□□□□ -1.25
SNU71YGR013W CDC16P09798 840 aa7.26□□□□□ -1.25
SNU71YGR013W ACE2P21192 770 aa7.26□□□□□ -1.25
SNU71YGR013W MCM3P24279 971 aaKnown RBP7.26□□□□□ -1.25
SNU71YGR013W YER010CP40011 234 aa7.26□□□□□ -1.25
SNU71YGR013W RRT14P40470 206 aa7.26□□□□□ -1.25
SNU71YGR013W YLR407WQ06070 228 aa7.26□□□□□ -1.25
SNU71YGR013W VHS3Q08438 674 aa7.26□□□□□ -1.25
SNU71YGR013W VAS1P07806 1104 aaKnown RBP7.26□□□□□ -1.25
SNU71YGR013W YEL076C-AP0CX16 216 aa7.26□□□□□ -1.25
SNU71YGR013W YLR464WP0CX17 216 aa7.26□□□□□ -1.25
SNU71YGR013W VPH1P32563 840 aaKnown RBP7.26□□□□□ -1.25
SNU71YGR013W RPT3P33298 428 aaKnown RBP7.26□□□□□ -1.25
SNU71YGR013W STT3P39007 718 aaKnown RBP7.26□□□□□ -1.25
SNU71YGR013W YEL076CP39971 216 aa7.26□□□□□ -1.25
SNU71YGR013W RPS0BP46654 252 aaKnown RBP7.26□□□□□ -1.25
SNU71YGR013W HFM1P51979 1187 aa7.26□□□□□ -1.25
SNU71YGR013W LEE1Q02799 301 aaKnown RBP7.26□□□□□ -1.25
SNU71YGR013W TPP1Q03796 238 aa7.26□□□□□ -1.25
SNU71YGR013W RTK1Q12100 620 aaPredicted RBP7.26□□□□□ -1.25
SNU71YGR013W HAL9Q12180 1030 aa7.26□□□□□ -1.25
SNU71YGR013W IRC20Q06554 1556 aa7.26□□□□□ -1.25
SNU71YGR013W PHO5P00635 467 aa7.25□□□□□ -1.25
SNU71YGR013W RPC82P32349 654 aa7.25□□□□□ -1.25
SNU71YGR013W YKR011CQ02209 353 aa7.25□□□□□ -1.25
SNU71YGR013W SRC1Q03707 834 aa7.25□□□□□ -1.25
SNU71YGR013W NSE5Q03718 556 aa7.25□□□□□ -1.25
SNU71YGR013W SYF1Q04048 859 aaPredicted RBP7.25□□□□□ -1.25
SNU71YGR013W XYL2Q07993 356 aa7.25□□□□□ -1.25
SNU71YGR013W PUS7Q08647 676 aaKnown RBP7.25□□□□□ -1.25
SNU71YGR013W NUP170P38181 1502 aa7.24□□□□□ -1.25
SNU71YGR013W CBP3P21560 335 aa7.24□□□□□ -1.25
SNU71YGR013W YKR075CP36155 307 aa7.24□□□□□ -1.25
SNU71YGR013W ABZ1P37254 787 aaPredicted RBP7.24□□□□□ -1.25
SNU71YGR013W PSF2P40359 213 aa7.24□□□□□ -1.25
SNU71YGR013W YGR016WP53209 190 aa7.24□□□□□ -1.25
SNU71YGR013W TY1A-BLQ12266 440 aa7.24□□□□□ -1.25
SNU71YGR013W RVB2Q12464 471 aaKnown RBP7.24□□□□□ -1.25
SNU71YGR013W SPO14P36126 1683 aa7.24□□□□□ -1.25
SNU71YGR013W CLB4P24871 460 aa7.24□□□□□ -1.25
SNU71YGR013W CDC60P26637 1090 aaKnown RBP7.24□□□□□ -1.25
SNU71YGR013W MF(ALPHA)2P32435 120 aa7.24□□□□□ -1.25
SNU71YGR013W RPD3P32561 433 aa7.24□□□□□ -1.25
SNU71YGR013W ECM21P38167 1117 aaKnown RBP7.24□□□□□ -1.25
SNU71YGR013W POA1P38218 177 aa7.24□□□□□ -1.25
SNU71YGR013W YBR138CP38277 524 aa7.24□□□□□ -1.25
SNU71YGR013W MAD2P40958 196 aa7.24□□□□□ -1.25
SNU71YGR013W CTF18P49956 741 aa7.24□□□□□ -1.25
SNU71YGR013W GPD1Q00055 391 aaKnown RBP7.24□□□□□ -1.25
SNU71YGR013W OSW2Q12202 724 aa7.24□□□□□ -1.25
SNU71YGR013W RPS17AP02407 136 aaKnown RBP7.23□□□□□ -1.25
SNU71YGR013W RPS17BP14127 136 aaKnown RBP7.23□□□□□ -1.25
SNU71YGR013W DGR2P32330 852 aa7.23□□□□□ -1.25
SNU71YGR013W ANP1P32629 500 aa7.23□□□□□ -1.25
SNU71YGR013W TYE7P33122 291 aaPredicted RBP7.23□□□□□ -1.25
SNU71YGR013W MDL2P33311 773 aa7.23□□□□□ -1.25
SNU71YGR013W GPT2P36148 743 aa7.23□□□□□ -1.25
SNU71YGR013W PIK1P39104 1066 aa7.23□□□□□ -1.25
SNU71YGR013W SYT1Q06836 1226 aa7.23□□□□□ -1.25
SNU71YGR013W FUM1P08417 488 aaKnown RBP7.22□□□□□ -1.25
SNU71YGR013W NAT1P12945 854 aaKnown RBP7.22□□□□□ -1.25
SNU71YGR013W CBF2P32504 956 aa7.22□□□□□ -1.25
SNU71YGR013W AKL1P38080 1108 aaKnown RBP7.22□□□□□ -1.25
SNU71YGR013W SAP4P53036 818 aa7.22□□□□□ -1.25
SNU71YGR013W SDH1Q00711 640 aa7.22□□□□□ -1.25
SNU71YGR013W UTP21Q06078 939 aaPredicted RBP7.22□□□□□ -1.25
SNU71YGR013W DIN7Q12086 430 aa7.22□□□□□ -1.25
SNU71YGR013W ULS1Q08562 1619 aa7.22□□□□□ -1.25
SNU71YGR013W COQ4O13525 335 aa7.21□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 123.9 ms