RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W ECM3Q99252 613 aa1.98□□□□□ -2.09
CUL3YGR003W MBR1P23493 339 aa1.98□□□□□ -2.09
CUL3YGR003W SAT4P25333 603 aaKnown RBP1.98□□□□□ -2.09
CUL3YGR003W APL2P36000 726 aaPredicted RBP1.98□□□□□ -2.09
CUL3YGR003W AKL1P38080 1108 aaKnown RBP1.98□□□□□ -2.09
CUL3YGR003W YJR096WP47137 282 aa1.98□□□□□ -2.09
CUL3YGR003W VPS36Q06696 566 aa1.98□□□□□ -2.09
CUL3YGR003W STE12P13574 688 aa1.97□□□□□ -2.09
CUL3YGR003W MVD1P32377 396 aaKnown RBP1.97□□□□□ -2.09
CUL3YGR003W YPT7P32939 208 aa1.97□□□□□ -2.09
CUL3YGR003W GMH1P36125 273 aa1.97□□□□□ -2.09
CUL3YGR003W DED81P38707 554 aaKnown RBP1.97□□□□□ -2.09
CUL3YGR003W CCT5P40413 562 aaKnown RBP1.97□□□□□ -2.09
CUL3YGR003W FHN1P53279 174 aa1.97□□□□□ -2.09
CUL3YGR003W RPS21BQ3E754 87 aaKnown RBP1.97□□□□□ -2.09
CUL3YGR003W IME1P21190 360 aa1.97□□□□□ -2.09
CUL3YGR003W FUB1P25659 250 aa1.97□□□□□ -2.09
CUL3YGR003W SEC6P32844 805 aa1.97□□□□□ -2.09
CUL3YGR003W YEL1P34225 687 aa1.97□□□□□ -2.09
CUL3YGR003W PHO11P35842 467 aa1.97□□□□□ -2.09
CUL3YGR003W SET3P36124 751 aa1.97□□□□□ -2.09
CUL3YGR003W PHO12P38693 467 aa1.97□□□□□ -2.09
CUL3YGR003W NMD2P38798 1089 aaKnown RBP1.97□□□□□ -2.09
CUL3YGR003W NUP60P39705 539 aa1.97□□□□□ -2.09
CUL3YGR003W ECM1P39715 212 aa1.97□□□□□ -2.09
CUL3YGR003W MAF1P41910 395 aa1.97□□□□□ -2.09
CUL3YGR003W YJR039WP47107 1121 aa1.97□□□□□ -2.09
CUL3YGR003W SDA1P53313 767 aaKnown RBP1.97□□□□□ -2.09
CUL3YGR003W YNR029CP53729 429 aaKnown RBP1.97□□□□□ -2.09
CUL3YGR003W ORC4P54791 529 aa1.97□□□□□ -2.09
CUL3YGR003W YPS7Q06325 596 aa1.97□□□□□ -2.09
CUL3YGR003W GUD1Q07729 489 aa1.97□□□□□ -2.09
CUL3YGR003W KCC4P25389 1037 aa1.96□□□□□ -2.1
CUL3YGR003W UGP1P32861 499 aaKnown RBP1.96□□□□□ -2.1
CUL3YGR003W MAL31P38156 614 aa1.96□□□□□ -2.1
CUL3YGR003W YHR202WP38887 602 aa1.96□□□□□ -2.1
CUL3YGR003W HXT6P39003 570 aaKnown RBP1.96□□□□□ -2.1
CUL3YGR003W HXT7P39004 570 aa1.96□□□□□ -2.1
CUL3YGR003W DOT6P40059 670 aaKnown RBP1.96□□□□□ -2.1
CUL3YGR003W SET2P46995 733 aaKnown RBP1.96□□□□□ -2.1
CUL3YGR003W YBP2P53169 641 aa1.96□□□□□ -2.1
CUL3YGR003W THI22Q06490 572 aa1.96□□□□□ -2.1
CUL3YGR003W MCM21Q06675 368 aa1.96□□□□□ -2.1
CUL3YGR003W THI73Q07904 523 aa1.96□□□□□ -2.1
CUL3YGR003W RPS21AP0C0V8 87 aaKnown RBP1.95□□□□□ -2.1
CUL3YGR003W THR1P17423 357 aaKnown RBP1.95□□□□□ -2.1
CUL3YGR003W IMG2P25642 146 aaPredicted RBP1.95□□□□□ -2.1
CUL3YGR003W YMC1P32331 307 aa1.95□□□□□ -2.1
CUL3YGR003W FAT1P38225 669 aa1.95□□□□□ -2.1
CUL3YGR003W BEM4P39011 633 aa1.95□□□□□ -2.1
CUL3YGR003W MTQ2Q03920 221 aaPredicted RBP1.95□□□□□ -2.1
CUL3YGR003W YLR407WQ06070 228 aa1.95□□□□□ -2.1
CUL3YGR003W ISA1Q07821 250 aaPredicted RBP1.95□□□□□ -2.1
CUL3YGR003W DAL3P32459 195 aa1.95□□□□□ -2.1
CUL3YGR003W MSS1P32559 526 aaPredicted RBP1.95□□□□□ -2.1
CUL3YGR003W SCT1P32784 759 aa1.95□□□□□ -2.1
CUL3YGR003W BCS1P32839 456 aa1.95□□□□□ -2.1
CUL3YGR003W TRZ1P36159 838 aaPredicted RBP1.95□□□□□ -2.1
CUL3YGR003W YHR097CP38809 366 aaKnown RBP1.95□□□□□ -2.1
CUL3YGR003W RSC8P43609 557 aaKnown RBP1.95□□□□□ -2.1
CUL3YGR003W COX18P53239 316 aa1.95□□□□□ -2.1
CUL3YGR003W ECM9Q02202 377 aa1.95□□□□□ -2.1
CUL3YGR003W CTK1Q03957 528 aaKnown RBP1.95□□□□□ -2.1
CUL3YGR003W PEX1P24004 1043 aa1.94□□□□□ -2.1
CUL3YGR003W EUG1P32474 517 aa1.94□□□□□ -2.1
CUL3YGR003W PRP19P32523 503 aaKnown RBP1.94□□□□□ -2.1
CUL3YGR003W YKU70P32807 602 aa1.94□□□□□ -2.1
CUL3YGR003W GCS1P35197 352 aa1.94□□□□□ -2.1
CUL3YGR003W TYS1P36421 394 aaKnown RBP1.94□□□□□ -2.1
CUL3YGR003W APN2P38207 520 aa1.94□□□□□ -2.1
CUL3YGR003W RFX1P48743 811 aa1.94□□□□□ -2.1
CUL3YGR003W HFD1Q04458 532 aa1.94□□□□□ -2.1
CUL3YGR003W COG8Q04632 607 aa1.94□□□□□ -2.1
CUL3YGR003W USV1Q12132 391 aa1.94□□□□□ -2.1
CUL3YGR003W ECM32P32644 1121 aaKnown RBP1.94□□□□□ -2.1
CUL3YGR003W HOT13P36078 116 aa1.94□□□□□ -2.1
CUL3YGR003W PXL1P36166 706 aa1.94□□□□□ -2.1
CUL3YGR003W CKB2P38930 258 aa1.94□□□□□ -2.1
CUL3YGR003W GPP1P41277 250 aaKnown RBP1.94□□□□□ -2.1
CUL3YGR003W RET2P43621 546 aa1.94□□□□□ -2.1
CUL3YGR003W REC102Q02721 264 aa1.94□□□□□ -2.1
CUL3YGR003W STP4Q07351 490 aa1.94□□□□□ -2.1
CUL3YGR003W SFP1P32432 683 aa1.93□□□□□ -2.1
CUL3YGR003W SER1P33330 395 aaKnown RBP1.93□□□□□ -2.1
CUL3YGR003W CRP1P38845 465 aaKnown RBP1.93□□□□□ -2.1
CUL3YGR003W PMC1P38929 1173 aaPredicted RBP1.93□□□□□ -2.1
CUL3YGR003W BUD8P41698 603 aa1.93□□□□□ -2.1
CUL3YGR003W BIT61P47041 543 aa1.93□□□□□ -2.1
CUL3YGR003W HLJ1P48353 224 aa1.93□□□□□ -2.1
CUL3YGR003W SPC98P53540 846 aa1.93□□□□□ -2.1
CUL3YGR003W ORM2Q06144 216 aa1.93□□□□□ -2.1
CUL3YGR003W ZRT2Q12436 422 aa1.93□□□□□ -2.1
CUL3YGR003W SWI6P09959 803 aa1.93□□□□□ -2.1
CUL3YGR003W GLN4P13188 809 aaKnown RBP1.93□□□□□ -2.1
CUL3YGR003W CDC26P14724 124 aa1.93□□□□□ -2.1
CUL3YGR003W FRS1P15624 595 aaKnown RBP1.93□□□□□ -2.1
CUL3YGR003W FEN2P25621 512 aaKnown RBP1.93□□□□□ -2.1
CUL3YGR003W BIT2P38346 545 aa1.93□□□□□ -2.1
CUL3YGR003W OAF1P39720 1047 aaPredicted RBP1.93□□□□□ -2.1
CUL3YGR003W YIL077CP40508 320 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms