RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C YKR075CP36155 307 aa4.37□□□□□ -1.71
PGD1YGL025C GZF3P42944 551 aaKnown RBP4.37□□□□□ -1.71
PGD1YGL025C RFX1P48743 811 aa4.37□□□□□ -1.71
PGD1YGL025C CHS5Q12114 671 aaKnown RBP4.37□□□□□ -1.71
PGD1YGL025C ERG20P08524 352 aaKnown RBP4.36□□□□□ -1.71
PGD1YGL025C GFA1P14742 717 aaKnown RBP4.36□□□□□ -1.71
PGD1YGL025C MSS1P32559 526 aaPredicted RBP4.36□□□□□ -1.71
PGD1YGL025C EMP70P32802 667 aa4.36□□□□□ -1.71
PGD1YGL025C YIL077CP40508 320 aa4.36□□□□□ -1.71
PGD1YGL025C GPP1P41277 250 aaKnown RBP4.36□□□□□ -1.71
PGD1YGL025C BFA1P47113 574 aa4.36□□□□□ -1.71
PGD1YGL025C YGR153WP48238 217 aa4.36□□□□□ -1.71
PGD1YGL025C STP4Q07351 490 aa4.36□□□□□ -1.71
PGD1YGL025C YTM1Q12024 460 aaPredicted RBP4.36□□□□□ -1.71
PGD1YGL025C DMC1P25453 334 aa4.35□□□□□ -1.71
PGD1YGL025C FUB1P25659 250 aa4.35□□□□□ -1.71
PGD1YGL025C COS111P38308 924 aa4.35□□□□□ -1.71
PGD1YGL025C YHR097CP38809 366 aaKnown RBP4.35□□□□□ -1.71
PGD1YGL025C BDH2P39713 417 aa4.35□□□□□ -1.71
PGD1YGL025C OAF1P39720 1047 aaPredicted RBP4.35□□□□□ -1.71
PGD1YGL025C BUD8P41698 603 aa4.35□□□□□ -1.71
PGD1YGL025C MPS3P47069 682 aa4.35□□□□□ -1.71
PGD1YGL025C YGR151CP53287 111 aa4.35□□□□□ -1.71
PGD1YGL025C NOP15P53927 220 aaPredicted RBP4.35□□□□□ -1.71
PGD1YGL025C YFT2Q06676 274 aa4.35□□□□□ -1.71
PGD1YGL025C HFI1Q12060 488 aa4.35□□□□□ -1.71
PGD1YGL025C RPS21AP0C0V8 87 aaKnown RBP4.34□□□□□ -1.71
PGD1YGL025C HCA4P20448 770 aaKnown RBP4.34□□□□□ -1.71
PGD1YGL025C OAF3P36023 863 aa4.34□□□□□ -1.71
PGD1YGL025C BRN1P38170 754 aa4.34□□□□□ -1.71
PGD1YGL025C FAT1P38225 669 aa4.34□□□□□ -1.71
PGD1YGL025C KHA1P40309 873 aa4.34□□□□□ -1.71
PGD1YGL025C MNN11P46985 422 aaKnown RBP4.34□□□□□ -1.71
PGD1YGL025C NUP145P49687 1317 aa4.34□□□□□ -1.71
PGD1YGL025C RPS17AP02407 136 aaKnown RBP4.33□□□□□ -1.72
PGD1YGL025C RPS17BP14127 136 aaKnown RBP4.33□□□□□ -1.72
PGD1YGL025C KIN82P25341 720 aa4.33□□□□□ -1.72
PGD1YGL025C SEC65P29478 273 aa4.33□□□□□ -1.72
PGD1YGL025C CTP1P38152 299 aa4.33□□□□□ -1.72
PGD1YGL025C YGR237CP50089 785 aa4.33□□□□□ -1.72
PGD1YGL025C HFD1Q04458 532 aa4.33□□□□□ -1.72
PGD1YGL025C VBA4Q04602 768 aaKnown RBP4.33□□□□□ -1.72
PGD1YGL025C YDL086WQ07505 273 aa4.33□□□□□ -1.72
PGD1YGL025C APM4Q99186 491 aa4.33□□□□□ -1.72
PGD1YGL025C BNR1P40450 1375 aa4.32□□□□□ -1.72
PGD1YGL025C YPT53P36019 220 aa4.32□□□□□ -1.72
PGD1YGL025C GMH1P36125 273 aa4.32□□□□□ -1.72
PGD1YGL025C UBP12P39538 1254 aa4.32□□□□□ -1.72
PGD1YGL025C YIL166CP40445 542 aa4.32□□□□□ -1.72
PGD1YGL025C IES1P43579 692 aa4.32□□□□□ -1.72
PGD1YGL025C YHM2Q04013 314 aa4.32□□□□□ -1.72
PGD1YGL025C RPS9BP05755 195 aaKnown RBP4.31□□□□□ -1.72
PGD1YGL025C PPZ2P33329 710 aa4.31□□□□□ -1.72
PGD1YGL025C DID4P36108 232 aa4.31□□□□□ -1.72
PGD1YGL025C KSP1P38691 1029 aaKnown RBP4.31□□□□□ -1.72
PGD1YGL025C PXA1P41909 870 aa4.31□□□□□ -1.72
PGD1YGL025C NMA2P53204 395 aa4.31□□□□□ -1.72
PGD1YGL025C IZH3Q07959 543 aa4.31□□□□□ -1.72
PGD1YGL025C FAP7Q12055 197 aaPredicted RBP4.31□□□□□ -1.72
PGD1YGL025C GLN4P13188 809 aaKnown RBP4.3□□□□□ -1.72
PGD1YGL025C ABF1P14164 731 aa4.3□□□□□ -1.72
PGD1YGL025C CDC26P14724 124 aa4.3□□□□□ -1.72
PGD1YGL025C SEC15P22224 910 aa4.3□□□□□ -1.72
PGD1YGL025C PRP22P24384 1145 aaKnown RBP4.3□□□□□ -1.72
PGD1YGL025C ADY2P25613 283 aa4.3□□□□□ -1.72
PGD1YGL025C FLO10P36170 1169 aa4.3□□□□□ -1.72
PGD1YGL025C RIX1P38883 763 aaPredicted RBP4.3□□□□□ -1.72
PGD1YGL025C YEL020CP39994 560 aa4.3□□□□□ -1.72
PGD1YGL025C MIT1P40002 666 aa4.3□□□□□ -1.72
PGD1YGL025C ATF1P40353 525 aa4.3□□□□□ -1.72
PGD1YGL025C SNF12P53628 566 aa4.3□□□□□ -1.72
PGD1YGL025C YSH1Q06224 779 aaPredicted RBP4.3□□□□□ -1.72
PGD1YGL025C LAM4P38800 1345 aa4.29□□□□□ -1.72
PGD1YGL025C TUB1P09733 447 aaKnown RBP4.29□□□□□ -1.72
PGD1YGL025C PRE4P30657 266 aa4.29□□□□□ -1.72
PGD1YGL025C YMC2P38087 329 aa4.29□□□□□ -1.72
PGD1YGL025C CDS1P38221 457 aa4.29□□□□□ -1.72
PGD1YGL025C DUN1P39009 513 aa4.29□□□□□ -1.72
PGD1YGL025C VID28P40547 921 aa4.29□□□□□ -1.72
PGD1YGL025C TAF4P50105 388 aa4.29□□□□□ -1.72
PGD1YGL025C SPO1P53541 631 aa4.29□□□□□ -1.72
PGD1YGL025C APM1Q00776 475 aaPredicted RBP4.29□□□□□ -1.72
PGD1YGL025C ARO10Q06408 635 aa4.29□□□□□ -1.72
PGD1YGL025C BMS1Q08965 1183 aaKnown RBP4.29□□□□□ -1.72
PGD1YGL025C RKI1Q12189 258 aa4.29□□□□□ -1.72
PGD1YGL025C KCC4P25389 1037 aa4.28□□□□□ -1.72
PGD1YGL025C NTH1P32356 751 aa4.28□□□□□ -1.72
PGD1YGL025C DAL3P32459 195 aa4.28□□□□□ -1.72
PGD1YGL025C CUE2P36075 443 aaKnown RBP4.28□□□□□ -1.72
PGD1YGL025C YGL081WP53156 320 aa4.28□□□□□ -1.72
PGD1YGL025C DIP5P53388 608 aa4.28□□□□□ -1.72
PGD1YGL025C PTA1Q01329 785 aaPredicted RBP4.28□□□□□ -1.72
PGD1YGL025C NSE5Q03718 556 aa4.28□□□□□ -1.72
PGD1YGL025C PPN1Q04119 674 aa4.28□□□□□ -1.72
PGD1YGL025C PHO5P00635 467 aa4.27□□□□□ -1.73
PGD1YGL025C MF(ALPHA)2P32435 120 aa4.27□□□□□ -1.73
PGD1YGL025C MTC7P32633 139 aa4.27□□□□□ -1.73
PGD1YGL025C MUP3P38734 546 aa4.27□□□□□ -1.73
PGD1YGL025C CRG1P38892 291 aaRIP-Chip data4.27□□□□□ -1.73not detected
PGD1YGL025C TMN3P40071 706 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms