RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W PEX15Q08215 383 aa4.06□□□□□ -1.76
SEC4YFL005W DIA2Q08496 732 aaPredicted RBP4.06□□□□□ -1.76
SEC4YFL005W HRP1Q99383 534 aaKnown RBP4.06□□□□□ -1.76
SEC4YFL005W ATP4P05626 244 aa4.05□□□□□ -1.76
SEC4YFL005W CDC26P14724 124 aa4.05□□□□□ -1.76
SEC4YFL005W ACO1P19414 778 aaKnown RBP RIP-Chip data4.05□□□□□ -1.76not detected
SEC4YFL005W HCA4P20448 770 aaKnown RBP4.05□□□□□ -1.76
SEC4YFL005W ATP12P22135 325 aa4.05□□□□□ -1.76
SEC4YFL005W PEX1P24004 1043 aa4.05□□□□□ -1.76
SEC4YFL005W ERG4P25340 473 aa4.05□□□□□ -1.76
SEC4YFL005W DGR2P32330 852 aa4.05□□□□□ -1.76
SEC4YFL005W TPM2P40414 161 aa4.05□□□□□ -1.76
SEC4YFL005W HOS4P40480 1083 aa4.05□□□□□ -1.76
SEC4YFL005W RSC8P43609 557 aaKnown RBP4.05□□□□□ -1.76
SEC4YFL005W STB4P50104 949 aa4.05□□□□□ -1.76
SEC4YFL005W STP4Q07351 490 aa4.05□□□□□ -1.76
SEC4YFL005W ACF2Q12168 779 aa4.05□□□□□ -1.76
SEC4YFL005W MPD2Q99316 277 aa4.05□□□□□ -1.76
SEC4YFL005W ERG20P08524 352 aaKnown RBP4.04□□□□□ -1.76
SEC4YFL005W IME1P21190 360 aa4.04□□□□□ -1.76
SEC4YFL005W MF(ALPHA)2P32435 120 aa4.04□□□□□ -1.76
SEC4YFL005W SRP68P38687 599 aaKnown RBP4.04□□□□□ -1.76
SEC4YFL005W LYS9P38999 446 aa4.04□□□□□ -1.76
SEC4YFL005W GET2P40056 285 aa4.04□□□□□ -1.76
SEC4YFL005W YNL195CP40168 261 aa4.04□□□□□ -1.76
SEC4YFL005W PXA1P41909 870 aa4.04□□□□□ -1.76
SEC4YFL005W DAS1P47005 663 aa4.04□□□□□ -1.76
SEC4YFL005W BIT61P47041 543 aa4.04□□□□□ -1.76
SEC4YFL005W MTL1P53214 551 aa4.04□□□□□ -1.76
SEC4YFL005W HOL1P53389 586 aa4.04□□□□□ -1.76
SEC4YFL005W TIM44Q01852 431 aa4.04□□□□□ -1.76
SEC4YFL005W NSE5Q03718 556 aa4.04□□□□□ -1.76
SEC4YFL005W PPN1Q04119 674 aa4.04□□□□□ -1.76
SEC4YFL005W VBA4Q04602 768 aaKnown RBP4.04□□□□□ -1.76
SEC4YFL005W VPS36Q06696 566 aa4.04□□□□□ -1.76
SEC4YFL005W YOR378WQ08902 515 aa4.04□□□□□ -1.76
SEC4YFL005W FRE5Q08908 694 aa4.04□□□□□ -1.76
SEC4YFL005W SST2P11972 698 aaKnown RBP4.03□□□□□ -1.76
SEC4YFL005W PRP22P24384 1145 aaKnown RBP4.03□□□□□ -1.76
SEC4YFL005W KIN82P25341 720 aa4.03□□□□□ -1.76
SEC4YFL005W HIR1P32479 840 aa4.03□□□□□ -1.76
SEC4YFL005W SEC6P32844 805 aa4.03□□□□□ -1.76
SEC4YFL005W NIC96P34077 839 aa4.03□□□□□ -1.76
SEC4YFL005W CCT3P39077 534 aaKnown RBP4.03□□□□□ -1.76
SEC4YFL005W NUP60P39705 539 aa4.03□□□□□ -1.76
SEC4YFL005W BUD8P41698 603 aa4.03□□□□□ -1.76
SEC4YFL005W UBC11P52492 156 aa4.03□□□□□ -1.76
SEC4YFL005W RNT1Q02555 471 aa4.03□□□□□ -1.76
SEC4YFL005W RCR2Q03446 210 aaKnown RBP4.03□□□□□ -1.76
SEC4YFL005W ECM38Q05902 660 aaPredicted RBP4.03□□□□□ -1.76
SEC4YFL005W ADY4Q05955 493 aa4.03□□□□□ -1.76
SEC4YFL005W OMS1Q06668 471 aa4.03□□□□□ -1.76
SEC4YFL005W NGL1Q08213 363 aaKnown RBP4.03□□□□□ -1.76
SEC4YFL005W POM34Q12445 299 aa4.03□□□□□ -1.76
SEC4YFL005W ECM3Q99252 613 aa4.03□□□□□ -1.76
SEC4YFL005W ALG7P07286 448 aa4.02□□□□□ -1.77
SEC4YFL005W HXT4P32467 576 aa4.02□□□□□ -1.77
SEC4YFL005W IRC5P43610 853 aa4.02□□□□□ -1.77
SEC4YFL005W TAF4P50105 388 aa4.02□□□□□ -1.77
SEC4YFL005W MET14Q02196 202 aa4.02□□□□□ -1.77
SEC4YFL005W RGC1Q06108 1083 aaKnown RBP4.02□□□□□ -1.77
SEC4YFL005W THI22Q06490 572 aa4.02□□□□□ -1.77
SEC4YFL005W NYV1Q12255 253 aa4.02□□□□□ -1.77
SEC4YFL005W NDJ1Q12366 352 aa4.02□□□□□ -1.77
SEC4YFL005W SEC15P22224 910 aa4.01□□□□□ -1.77
SEC4YFL005W KCC4P25389 1037 aa4.01□□□□□ -1.77
SEC4YFL005W YKL133CP36066 463 aa4.01□□□□□ -1.77
SEC4YFL005W BCD1P38772 366 aa4.01□□□□□ -1.77
SEC4YFL005W FMO1P38866 432 aa4.01□□□□□ -1.77
SEC4YFL005W REV7P38927 245 aa4.01□□□□□ -1.77
SEC4YFL005W YJL163CP46996 555 aa4.01□□□□□ -1.77
SEC4YFL005W CNM67P53865 581 aaKnown RBP4.01□□□□□ -1.77
SEC4YFL005W IRC13Q08630 104 aa4.01□□□□□ -1.77
SEC4YFL005W CWC2Q12046 339 aaPredicted RBP4.01□□□□□ -1.77
SEC4YFL005W GAL1P04385 528 aa4□□□□□ -1.77
SEC4YFL005W RPS9BP05755 195 aaKnown RBP4□□□□□ -1.77
SEC4YFL005W PPR1P07272 904 aaPredicted RBP4□□□□□ -1.77
SEC4YFL005W PRP28P23394 588 aa4□□□□□ -1.77
SEC4YFL005W PTP2P29461 750 aa4□□□□□ -1.77
SEC4YFL005W PRE4P30657 266 aa4□□□□□ -1.77
SEC4YFL005W MVD1P32377 396 aaKnown RBP4□□□□□ -1.77
SEC4YFL005W BCS1P32839 456 aa4□□□□□ -1.77
SEC4YFL005W HIS7P33734 552 aaKnown RBP4□□□□□ -1.77
SEC4YFL005W YHR033WP38690 423 aa4□□□□□ -1.77
SEC4YFL005W PIP2P52960 996 aa4□□□□□ -1.77
SEC4YFL005W SPO1P53541 631 aa4□□□□□ -1.77
SEC4YFL005W YMR206WQ03695 313 aa4□□□□□ -1.77
SEC4YFL005W MLC2Q06580 163 aa4□□□□□ -1.77
SEC4YFL005W CLF1Q12309 687 aaPredicted RBP4□□□□□ -1.77
SEC4YFL005W SIR3P06701 978 aa3.99□□□□□ -1.77
SEC4YFL005W YEL076C-AP0CX16 216 aa3.99□□□□□ -1.77
SEC4YFL005W YLR464WP0CX17 216 aa3.99□□□□□ -1.77
SEC4YFL005W HOP1P20050 605 aa3.99□□□□□ -1.77
SEC4YFL005W PPS1P38148 807 aa3.99□□□□□ -1.77
SEC4YFL005W STL1P39932 569 aa3.99□□□□□ -1.77
SEC4YFL005W YEL076CP39971 216 aa3.99□□□□□ -1.77
SEC4YFL005W FMP52P40008 231 aa3.99□□□□□ -1.77
SEC4YFL005W PIG2P40187 538 aa3.99□□□□□ -1.77
SEC4YFL005W MTD1Q02046 320 aaKnown RBP3.99□□□□□ -1.77
SEC4YFL005W MUK1Q02866 612 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms