RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C YKR018CP36114 725 aa7.06□□□□□ -1.28
SHO1YER118C NPR3P38742 1146 aa7.06□□□□□ -1.28
SHO1YER118C QNS1P38795 714 aaKnown RBP7.06□□□□□ -1.28
SHO1YER118C NUP85P46673 744 aa7.06□□□□□ -1.28
SHO1YER118C MDE1P47095 244 aa7.06□□□□□ -1.28
SHO1YER118C GCV1P48015 400 aa7.06□□□□□ -1.28
SHO1YER118C BSC5P53755 489 aa7.06□□□□□ -1.28
SHO1YER118C YML119WQ03208 357 aa7.06□□□□□ -1.28
SHO1YER118C QCR6P00127 147 aa7.05□□□□□ -1.28
SHO1YER118C RPC40P07703 335 aaKnown RBP7.05□□□□□ -1.28
SHO1YER118C POL3P15436 1097 aa7.05□□□□□ -1.28
SHO1YER118C BET2P20133 325 aa7.05□□□□□ -1.28
SHO1YER118C SDH2P21801 266 aa7.05□□□□□ -1.28
SHO1YER118C GPI10P30777 616 aa7.05□□□□□ -1.28
SHO1YER118C KNS1P32350 737 aaPredicted RBP7.05□□□□□ -1.28
SHO1YER118C PUP2P32379 260 aa7.05□□□□□ -1.28
SHO1YER118C SET3P36124 751 aa7.05□□□□□ -1.28
SHO1YER118C TAF5P38129 798 aa7.05□□□□□ -1.28
SHO1YER118C FTH1P38310 465 aa7.05□□□□□ -1.28
SHO1YER118C REI1P38344 393 aaPredicted RBP7.05□□□□□ -1.28
SHO1YER118C PIK1P39104 1066 aa7.05□□□□□ -1.28
SHO1YER118C GDI1P39958 451 aaKnown RBP7.05□□□□□ -1.28
SHO1YER118C NPP2P39997 493 aa7.05□□□□□ -1.28
SHO1YER118C PRM2P40534 656 aa7.05□□□□□ -1.28
SHO1YER118C DJP1P40564 432 aa7.05□□□□□ -1.28
SHO1YER118C YFL052WP43551 465 aa7.05□□□□□ -1.28
SHO1YER118C CIT3P43635 486 aa7.05□□□□□ -1.28
SHO1YER118C PSP2P50109 593 aaKnown RBP7.05□□□□□ -1.28
SHO1YER118C LAP3Q01532 483 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
SHO1YER118C RPT6Q01939 405 aaKnown RBP7.05□□□□□ -1.28
SHO1YER118C IWR1Q07532 353 aaPredicted RBP7.05□□□□□ -1.28
SHO1YER118C YPL277CQ08989 487 aa7.05□□□□□ -1.28
SHO1YER118C NFI1Q12216 726 aa7.05□□□□□ -1.28
SHO1YER118C ZRT2Q12436 422 aa7.05□□□□□ -1.28
SHO1YER118C NSI1Q12457 570 aa7.05□□□□□ -1.28
SHO1YER118C Q0142Q9ZZW4 58 aa7.05□□□□□ -1.28
SHO1YER118C CPA2P03965 1118 aaKnown RBP7.04□□□□□ -1.28
SHO1YER118C RPP1AP05318 106 aaPredicted RBP7.04□□□□□ -1.28
SHO1YER118C HSF1P10961 833 aa7.04□□□□□ -1.28
SHO1YER118C SIR1P21691 654 aa7.04□□□□□ -1.28
SHO1YER118C SRO9P25567 434 aaKnown RBP7.04□□□□□ -1.28
SHO1YER118C MRPL36P36531 177 aa7.04□□□□□ -1.28
SHO1YER118C SSP120P39931 234 aaKnown RBP7.04□□□□□ -1.28
SHO1YER118C TIF4631P39935 952 aaKnown RBP7.04□□□□□ -1.28
SHO1YER118C YEL025CP39991 1188 aa7.04□□□□□ -1.28
SHO1YER118C PCL7P40186 285 aa7.04□□□□□ -1.28
SHO1YER118C SHR5P41912 237 aa7.04□□□□□ -1.28
SHO1YER118C FYV8P46949 817 aaKnown RBP7.04□□□□□ -1.28
SHO1YER118C YJR039WP47107 1121 aa7.04□□□□□ -1.28
SHO1YER118C DUO1P53168 247 aaKnown RBP7.04□□□□□ -1.28
SHO1YER118C PIL1P53252 339 aaKnown RBP7.04□□□□□ -1.28
SHO1YER118C YNR061CP53747 219 aa7.04□□□□□ -1.28
SHO1YER118C VPS75P53853 264 aa7.04□□□□□ -1.28
SHO1YER118C NOP15P53927 220 aaPredicted RBP7.04□□□□□ -1.28
SHO1YER118C CRR1Q05790 422 aa7.04□□□□□ -1.28
SHO1YER118C RTK1Q12100 620 aaPredicted RBP7.04□□□□□ -1.28
SHO1YER118C YEL076C-AP0CX16 216 aa7.03□□□□□ -1.28
SHO1YER118C YLR464WP0CX17 216 aa7.03□□□□□ -1.28
SHO1YER118C ACO1P19414 778 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
SHO1YER118C STE50P25344 346 aa7.03□□□□□ -1.28
SHO1YER118C UGA2P38067 497 aa7.03□□□□□ -1.28
SHO1YER118C GPB2P39717 880 aa7.03□□□□□ -1.28
SHO1YER118C YEL076CP39971 216 aa7.03□□□□□ -1.28
SHO1YER118C RTT105P40063 208 aa7.03□□□□□ -1.28
SHO1YER118C SPO22P40511 975 aa7.03□□□□□ -1.28
SHO1YER118C RSA3Q05942 220 aaKnown RBP7.03□□□□□ -1.28
SHO1YER118C PDH1Q12428 516 aaKnown RBP7.03□□□□□ -1.28
SHO1YER118C SKM1Q12469 655 aa7.03□□□□□ -1.28
SHO1YER118C RRP36Q12481 300 aaPredicted RBP7.03□□□□□ -1.28
SHO1YER118C YLR149CQ99296 730 aa7.03□□□□□ -1.28
SHO1YER118C MRP10O75012 95 aa7.02□□□□□ -1.29
SHO1YER118C RPL19AP0CX82 189 aaKnown RBP7.02□□□□□ -1.29
SHO1YER118C RPL19BP0CX83 189 aaPredicted RBP7.02□□□□□ -1.29
SHO1YER118C AMS1P22855 1083 aa7.02□□□□□ -1.29
SHO1YER118C YCK2P23292 546 aaKnown RBP7.02□□□□□ -1.29
SHO1YER118C POL4P25615 582 aa7.02□□□□□ -1.29
SHO1YER118C MRPL16P38064 232 aa7.02□□□□□ -1.29
SHO1YER118C GIC1P38785 314 aa7.02□□□□□ -1.29
SHO1YER118C SSZ1P38788 538 aaKnown RBP7.02□□□□□ -1.29
SHO1YER118C SET5P38890 526 aaKnown RBP7.02□□□□□ -1.29
SHO1YER118C BEM4P39011 633 aa7.02□□□□□ -1.29
SHO1YER118C RPN3P40016 523 aaKnown RBP7.02□□□□□ -1.29
SHO1YER118C LCB2P40970 561 aa7.02□□□□□ -1.29
SHO1YER118C PSP1P50896 841 aaKnown RBP7.02□□□□□ -1.29
SHO1YER118C HST1P53685 503 aa7.02□□□□□ -1.29
SHO1YER118C HED1Q03937 162 aa7.02□□□□□ -1.29
SHO1YER118C YLH47Q06493 454 aa7.02□□□□□ -1.29
SHO1YER118C YOR059CQ08448 450 aaKnown RBP7.02□□□□□ -1.29
SHO1YER118C APL5Q08951 932 aaKnown RBP7.02□□□□□ -1.29
SHO1YER118C TUF1P02992 437 aaKnown RBP7.01□□□□□ -1.29
SHO1YER118C LCB1P25045 558 aaKnown RBP7.01□□□□□ -1.29
SHO1YER118C RRP7P25368 297 aaPredicted RBP7.01□□□□□ -1.29
SHO1YER118C ADK2P26364 225 aa7.01□□□□□ -1.29
SHO1YER118C UGA3P26370 528 aa7.01□□□□□ -1.29
SHO1YER118C DGR2P32330 852 aa7.01□□□□□ -1.29
SHO1YER118C IME2P32581 645 aa7.01□□□□□ -1.29
SHO1YER118C YKR075CP36155 307 aa7.01□□□□□ -1.29
SHO1YER118C VPS41P38959 992 aa7.01□□□□□ -1.29
SHO1YER118C MAD2P40958 196 aa7.01□□□□□ -1.29
SHO1YER118C UBP15P50101 1230 aa7.01□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms