RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM4	YER112W	MVD1	P32377	396 aa	Known RBP	4.56	□□□□□ -1.68
LSM4	YER112W	YKU70	P32807	602 aa		4.56	□□□□□ -1.68
LSM4	YER112W	FMO1	P38866	432 aa		4.56	□□□□□ -1.68
LSM4	YER112W	LYS9	P38999	446 aa		4.56	□□□□□ -1.68
LSM4	YER112W	RSC8	P43609	557 aa	Known RBP	4.56	□□□□□ -1.68
LSM4	YER112W	NOP9	P47077	666 aa	Known RBP	4.56	□□□□□ -1.68
LSM4	YER112W	TAH11	P47112	604 aa		4.56	□□□□□ -1.68
LSM4	YER112W	ENP2	P48234	707 aa	Known RBP	4.56	□□□□□ -1.68
LSM4	YER112W	RNR4	P49723	345 aa	Known RBP	4.56	□□□□□ -1.68
LSM4	YER112W	VPS73	P53142	486 aa	Known RBP	4.56	□□□□□ -1.68
LSM4	YER112W	VBA4	Q04602	768 aa	Known RBP	4.56	□□□□□ -1.68
LSM4	YER112W	RPS21B	Q3E754	87 aa	Known RBP	4.56	□□□□□ -1.68
LSM4	YER112W	ECM3	Q99252	613 aa		4.56	□□□□□ -1.68
LSM4	YER112W	RPS17A	P02407	136 aa	Known RBP	4.55	□□□□□ -1.68
LSM4	YER112W	RPS17B	P14127	136 aa	Known RBP	4.55	□□□□□ -1.68
LSM4	YER112W	FRS1	P15624	595 aa	Known RBP	4.55	□□□□□ -1.68
LSM4	YER112W	KIN82	P25341	720 aa		4.55	□□□□□ -1.68
LSM4	YER112W	YBR071W	P38243	211 aa		4.55	□□□□□ -1.68
LSM4	YER112W	RIX1	P38883	763 aa	Predicted RBP	4.55	□□□□□ -1.68
LSM4	YER112W	DUN1	P39009	513 aa		4.55	□□□□□ -1.68
LSM4	YER112W	GET2	P40056	285 aa		4.55	□□□□□ -1.68
LSM4	YER112W	TEL2	P53038	688 aa		4.55	□□□□□ -1.68
LSM4	YER112W	NOP15	P53927	220 aa	Predicted RBP	4.55	□□□□□ -1.68
LSM4	YER112W	AFT2	Q08957	416 aa		4.55	□□□□□ -1.68
LSM4	YER112W	YPR027C	Q12079	277 aa		4.55	□□□□□ -1.68
LSM4	YER112W	YKL033W-A	Q86ZR7	236 aa		4.55	□□□□□ -1.68
LSM4	YER112W	YNL195C	P40168	261 aa		4.54	□□□□□ -1.68
LSM4	YER112W	PIG2	P40187	538 aa		4.54	□□□□□ -1.68
LSM4	YER112W	NIT2	P47016	307 aa		4.54	□□□□□ -1.68
LSM4	YER112W	SKY1	Q03656	742 aa		4.54	□□□□□ -1.68
LSM4	YER112W	THI22	Q06490	572 aa		4.54	□□□□□ -1.68
LSM4	YER112W	POM34	Q12445	299 aa		4.54	□□□□□ -1.68
LSM4	YER112W	RPS9B	P05755	195 aa	Known RBP	4.53	□□□□□ -1.68
LSM4	YER112W	SIR3	P06701	978 aa		4.53	□□□□□ -1.68
LSM4	YER112W	ERG6	P25087	383 aa	Known RBP	4.53	□□□□□ -1.68
LSM4	YER112W	HIR1	P32479	840 aa		4.53	□□□□□ -1.68
LSM4	YER112W	TOM20	P35180	183 aa		4.53	□□□□□ -1.68
LSM4	YER112W	PCL5	P38794	229 aa		4.53	□□□□□ -1.68
LSM4	YER112W	EMP65	P40085	556 aa		4.53	□□□□□ -1.68
LSM4	YER112W	GPP2	P40106	250 aa	Known RBP	4.53	□□□□□ -1.68
LSM4	YER112W	PXA1	P41909	870 aa		4.53	□□□□□ -1.68
LSM4	YER112W	BIT61	P47041	543 aa		4.53	□□□□□ -1.68
LSM4	YER112W	SSL2	Q00578	843 aa		4.53	□□□□□ -1.68
LSM4	YER112W	NSE5	Q03718	556 aa		4.53	□□□□□ -1.68
LSM4	YER112W	RPS21A	P0C0V8	87 aa	Known RBP	4.52	□□□□□ -1.69
LSM4	YER112W	GLN4	P13188	809 aa	Known RBP	4.52	□□□□□ -1.69
LSM4	YER112W	KIN3	P22209	435 aa		4.52	□□□□□ -1.69
LSM4	YER112W	BIT2	P38346	545 aa		4.52	□□□□□ -1.69
LSM4	YER112W	YIL166C	P40445	542 aa		4.52	□□□□□ -1.69
LSM4	YER112W	IES1	P43579	692 aa		4.52	□□□□□ -1.69
LSM4	YER112W	YJR120W	P47157	116 aa		4.52	□□□□□ -1.69
LSM4	YER112W	PAN2	P53010	1115 aa	Predicted RBP	4.52	□□□□□ -1.69
LSM4	YER112W	PEX14	P53112	341 aa		4.52	□□□□□ -1.69
LSM4	YER112W	SPO1	P53541	631 aa		4.52	□□□□□ -1.69
LSM4	YER112W	YPS7	Q06325	596 aa		4.52	□□□□□ -1.69
LSM4	YER112W	VPS36	Q06696	566 aa		4.52	□□□□□ -1.69
LSM4	YER112W	KAR1	P11927	433 aa		4.51	□□□□□ -1.69
LSM4	YER112W	PRP28	P23394	588 aa		4.51	□□□□□ -1.69
LSM4	YER112W	FAT1	P38225	669 aa		4.51	□□□□□ -1.69
LSM4	YER112W	SFB3	P38810	929 aa		4.51	□□□□□ -1.69
LSM4	YER112W	VID28	P40547	921 aa		4.51	□□□□□ -1.69
LSM4	YER112W	SLD3	P53135	668 aa		4.51	□□□□□ -1.69
LSM4	YER112W	SPC105	P53148	917 aa		4.51	□□□□□ -1.69
LSM4	YER112W	FOL1	P53848	824 aa		4.51	□□□□□ -1.69
LSM4	YER112W	COG6	P53959	839 aa		4.51	□□□□□ -1.69
LSM4	YER112W	ZRT2	Q12436	422 aa		4.51	□□□□□ -1.69
LSM4	YER112W	ABF1	P14164	731 aa		4.5	□□□□□ -1.69
LSM4	YER112W	MDM10	P18409	493 aa		4.5	□□□□□ -1.69
LSM4	YER112W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
LSM4	YER112W	IME1	P21190	360 aa		4.5	□□□□□ -1.69
LSM4	YER112W	NTH1	P32356	751 aa		4.5	□□□□□ -1.69
LSM4	YER112W	YPT7	P32939	208 aa		4.5	□□□□□ -1.69
LSM4	YER112W	PHO11	P35842	467 aa		4.5	□□□□□ -1.69
LSM4	YER112W	FLO10	P36170	1169 aa		4.5	□□□□□ -1.69
LSM4	YER112W	PHO12	P38693	467 aa		4.5	□□□□□ -1.69
LSM4	YER112W	TAF4	P50105	388 aa		4.5	□□□□□ -1.69
LSM4	YER112W	RCR2	Q03446	210 aa	Known RBP	4.5	□□□□□ -1.69
LSM4	YER112W	ARO10	Q06408	635 aa		4.5	□□□□□ -1.69
LSM4	YER112W	STP4	Q07351	490 aa		4.5	□□□□□ -1.69
LSM4	YER112W	CHS5	Q12114	671 aa	Known RBP	4.5	□□□□□ -1.69
LSM4	YER112W	ICT1	Q12385	394 aa		4.5	□□□□□ -1.69
LSM4	YER112W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
LSM4	YER112W	COX11	P19516	300 aa	Known RBP	4.49	□□□□□ -1.69
LSM4	YER112W	FEN2	P25621	512 aa	Known RBP	4.49	□□□□□ -1.69
LSM4	YER112W	DGR2	P32330	852 aa		4.49	□□□□□ -1.69
LSM4	YER112W	DAL3	P32459	195 aa		4.49	□□□□□ -1.69
LSM4	YER112W	BCS1	P32839	456 aa		4.49	□□□□□ -1.69
LSM4	YER112W	SEC6	P32844	805 aa		4.49	□□□□□ -1.69
LSM4	YER112W	CBR1	P38626	284 aa	Known RBP	4.49	□□□□□ -1.69
LSM4	YER112W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.49	□□□□□ -1.69	not detected
LSM4	YER112W	PEA2	P40091	420 aa		4.49	□□□□□ -1.69
LSM4	YER112W	ARG2	P40360	574 aa		4.49	□□□□□ -1.69
LSM4	YER112W	BUD8	P41698	603 aa		4.49	□□□□□ -1.69
LSM4	YER112W	FHN1	P53279	174 aa		4.49	□□□□□ -1.69
LSM4	YER112W	PEX15	Q08215	383 aa		4.49	□□□□□ -1.69
LSM4	YER112W	CDC26	P14724	124 aa		4.48	□□□□□ -1.69
LSM4	YER112W	DMC1	P25453	334 aa		4.48	□□□□□ -1.69
LSM4	YER112W	ADY2	P25613	283 aa		4.48	□□□□□ -1.69
LSM4	YER112W	MF(ALPHA)2	P32435	120 aa		4.48	□□□□□ -1.69
LSM4	YER112W	TFC4	P33339	1025 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms