RNA–Protein interactions for RNA: YDR030C

RAD28, Transcript of Protein involved in DNA repair, yeast

Gene RAD28, Length 1,521 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD28	YDR030C	NIP100	P33420	868 aa		4.97	□□□□□ -1.61
RAD28	YDR030C	MUD2	P36084	527 aa	Known RBP	4.97	□□□□□ -1.61
RAD28	YDR030C	KAE1	P36132	386 aa		4.97	□□□□□ -1.61
RAD28	YDR030C	STV1	P37296	890 aa		4.97	□□□□□ -1.61
RAD28	YDR030C	NDT80	P38830	627 aa		4.97	□□□□□ -1.61
RAD28	YDR030C	VPS41	P38959	992 aa		4.97	□□□□□ -1.61
RAD28	YDR030C	UBP5	P39944	805 aa		4.97	□□□□□ -1.61
RAD28	YDR030C	NBP1	P52919	319 aa	Predicted RBP	4.97	□□□□□ -1.61
RAD28	YDR030C	DOS2	P54858	310 aa		4.97	□□□□□ -1.61
RAD28	YDR030C	MRS2	Q01926	470 aa		4.97	□□□□□ -1.61
RAD28	YDR030C	ROD1	Q02805	837 aa		4.97	□□□□□ -1.61
RAD28	YDR030C	DOT1	Q04089	582 aa	Known RBP	4.97	□□□□□ -1.61
RAD28	YDR030C	GYL1	Q04322	720 aa		4.97	□□□□□ -1.61
RAD28	YDR030C	NUR1	Q12066	484 aa		4.97	□□□□□ -1.61
RAD28	YDR030C	FAL1	Q12099	399 aa	Known RBP	4.97	□□□□□ -1.61
RAD28	YDR030C	RMP1	Q12530	201 aa		4.97	□□□□□ -1.61
RAD28	YDR030C	CDC8	P00572	216 aa		4.96	□□□□□ -1.62
RAD28	YDR030C	CHS2	P14180	963 aa		4.96	□□□□□ -1.62
RAD28	YDR030C	JNM1	P36224	373 aa		4.96	□□□□□ -1.62
RAD28	YDR030C	SET5	P38890	526 aa	Known RBP	4.96	□□□□□ -1.62
RAD28	YDR030C	YMR124W	P39523	943 aa	Known RBP	4.96	□□□□□ -1.62
RAD28	YDR030C	TIF4631	P39935	952 aa	Known RBP	4.96	□□□□□ -1.62
RAD28	YDR030C	MIC19	P43594	170 aa		4.96	□□□□□ -1.62
RAD28	YDR030C	VPS4	P52917	437 aa		4.96	□□□□□ -1.62
RAD28	YDR030C	TAD1	P53065	400 aa		4.96	□□□□□ -1.62
RAD28	YDR030C	VID30	P53076	958 aa		4.96	□□□□□ -1.62
RAD28	YDR030C	SOL4	P53315	255 aa		4.96	□□□□□ -1.62
RAD28	YDR030C	TOF1	P53840	1238 aa		4.96	□□□□□ -1.62
RAD28	YDR030C	ORC4	P54791	529 aa		4.96	□□□□□ -1.62
RAD28	YDR030C	TRM44	Q02648	567 aa	Known RBP	4.96	□□□□□ -1.62
RAD28	YDR030C	POB3	Q04636	552 aa	Known RBP	4.96	□□□□□ -1.62
RAD28	YDR030C	GIC2	Q06648	383 aa		4.96	□□□□□ -1.62
RAD28	YDR030C	OMS1	Q06668	471 aa		4.96	□□□□□ -1.62
RAD28	YDR030C	YDL057W	Q07379	328 aa		4.96	□□□□□ -1.62
RAD28	YDR030C	NOP6	Q07623	225 aa	Known RBP	4.96	□□□□□ -1.62
RAD28	YDR030C	ARP6	Q12509	438 aa		4.96	□□□□□ -1.62
RAD28	YDR030C	DAL7	P21826	554 aa		4.95	□□□□□ -1.62
RAD28	YDR030C	YKL069W	P36088	180 aa		4.95	□□□□□ -1.62
RAD28	YDR030C	GPT2	P36148	743 aa		4.95	□□□□□ -1.62
RAD28	YDR030C	KEL1	P38853	1164 aa	Known RBP	4.95	□□□□□ -1.62
RAD28	YDR030C	SAP1	P39955	897 aa	Known RBP	4.95	□□□□□ -1.62
RAD28	YDR030C	SPF1	P39986	1215 aa	Known RBP	4.95	□□□□□ -1.62
RAD28	YDR030C	MMM1	P41800	426 aa		4.95	□□□□□ -1.62
RAD28	YDR030C	CTK3	P46963	296 aa	Predicted RBP	4.95	□□□□□ -1.62
RAD28	YDR030C	SGM1	P47166	707 aa		4.95	□□□□□ -1.62
RAD28	YDR030C	BTN2	P53286	410 aa		4.95	□□□□□ -1.62
RAD28	YDR030C	CWC22	P53333	577 aa	Known RBP	4.95	□□□□□ -1.62
RAD28	YDR030C	GIR2	Q03768	265 aa	Predicted RBP	4.95	□□□□□ -1.62
RAD28	YDR030C	YMR114C	Q04471	368 aa	Known RBP	4.95	□□□□□ -1.62
RAD28	YDR030C	TDA5	Q06417	326 aa	Known RBP	4.95	□□□□□ -1.62
RAD28	YDR030C	MLH2	Q07980	695 aa		4.95	□□□□□ -1.62
RAD28	YDR030C	YPL277C	Q08989	487 aa		4.95	□□□□□ -1.62
RAD28	YDR030C	RUD3	Q12234	484 aa	Known RBP	4.95	□□□□□ -1.62
RAD28	YDR030C	TRP2	P00899	507 aa	Known RBP	4.94	□□□□□ -1.62
RAD28	YDR030C	DED1	P06634	604 aa	Known RBP	4.94	□□□□□ -1.62
RAD28	YDR030C	SRD1	P09007	221 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	PCK1	P10963	549 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	GFA1	P14742	717 aa	Known RBP	4.94	□□□□□ -1.62
RAD28	YDR030C	KRS1	P15180	591 aa	Known RBP	4.94	□□□□□ -1.62
RAD28	YDR030C	BAS1	P22035	811 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	CLB1	P24868	471 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	LYP1	P32487	611 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	ECM32	P32644	1121 aa	Known RBP	4.94	□□□□□ -1.62
RAD28	YDR030C	ADD66	P36040	267 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	RGD1	P38339	666 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	TDA3	P38758	523 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	TAT2	P38967	592 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	SDS3	P40505	327 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	ULP2	P40537	1034 aa	Predicted RBP	4.94	□□□□□ -1.62
RAD28	YDR030C	COS5	P47187	383 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	TYW3	P53177	273 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	DIP5	P53388	608 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	CNM67	P53865	581 aa	Known RBP	4.94	□□□□□ -1.62
RAD28	YDR030C	RNT1	Q02555	471 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	VTC3	Q02725	835 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	VTI1	Q04338	217 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	TSR1	Q07381	788 aa	Known RBP	4.94	□□□□□ -1.62
RAD28	YDR030C	SIL1	Q08199	421 aa		4.94	□□□□□ -1.62
RAD28	YDR030C	ALG6	Q12001	544 aa	Known RBP	4.94	□□□□□ -1.62
RAD28	YDR030C	GSC2	P40989	1895 aa		4.93	□□□□□ -1.62
RAD28	YDR030C	RAD1	P06777	1100 aa		4.93	□□□□□ -1.62
RAD28	YDR030C	SWI6	P09959	803 aa		4.93	□□□□□ -1.62
RAD28	YDR030C	ERG11	P10614	530 aa		4.93	□□□□□ -1.62
RAD28	YDR030C	CLN3	P13365	580 aa		4.93	□□□□□ -1.62
RAD28	YDR030C	HPR1	P17629	752 aa	Known RBP	4.93	□□□□□ -1.62
RAD28	YDR030C	MKK2	P32491	506 aa		4.93	□□□□□ -1.62
RAD28	YDR030C	PHO88	P38264	188 aa	Predicted RBP	4.93	□□□□□ -1.62
RAD28	YDR030C	GDT1	P38301	280 aa	Predicted RBP	4.93	□□□□□ -1.62
RAD28	YDR030C	RPN3	P40016	523 aa	Known RBP	4.93	□□□□□ -1.62
RAD28	YDR030C	NIT1	P40447	199 aa		4.93	□□□□□ -1.62
RAD28	YDR030C	KAP114	P53067	1004 aa		4.93	□□□□□ -1.62
RAD28	YDR030C	LIF1	P53150	421 aa		4.93	□□□□□ -1.62
RAD28	YDR030C	YGR021W	P53212	290 aa		4.93	□□□□□ -1.62
RAD28	YDR030C	URH1	Q04179	340 aa		4.93	□□□□□ -1.62
RAD28	YDR030C	YLR297W	Q05899	129 aa		4.93	□□□□□ -1.62
RAD28	YDR030C	TRP3	P00937	484 aa		4.92	□□□□□ -1.62
RAD28	YDR030C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
RAD28	YDR030C	CBP1	P07252	654 aa		4.92	□□□□□ -1.62
RAD28	YDR030C	RAD18	P10862	487 aa		4.92	□□□□□ -1.62
RAD28	YDR030C	PHO8	P11491	566 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 93.4 ms