RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	RCR2	Q03446	210 aa	Known RBP	5.82	□□□□□ -1.48
UBS1	YBR165W	YGR161W-C	Q3E744	92 aa		5.82	□□□□□ -1.48
UBS1	YBR165W	IME1	P21190	360 aa		5.81	□□□□□ -1.48
UBS1	YBR165W	KIN82	P25341	720 aa		5.81	□□□□□ -1.48
UBS1	YBR165W	FUB1	P25659	250 aa		5.81	□□□□□ -1.48
UBS1	YBR165W	HXT6	P39003	570 aa	Known RBP	5.81	□□□□□ -1.48
UBS1	YBR165W	HXT7	P39004	570 aa		5.81	□□□□□ -1.48
UBS1	YBR165W	GZF3	P42944	551 aa	Known RBP	5.81	□□□□□ -1.48
UBS1	YBR165W	UME1	Q03010	460 aa		5.81	□□□□□ -1.48
UBS1	YBR165W	VBA4	Q04602	768 aa	Known RBP	5.81	□□□□□ -1.48
UBS1	YBR165W	ABF1	P14164	731 aa		5.8	□□□□□ -1.48
UBS1	YBR165W	ILV6	P25605	309 aa	Known RBP	5.8	□□□□□ -1.48
UBS1	YBR165W	MSS1	P32559	526 aa	Predicted RBP	5.8	□□□□□ -1.48
UBS1	YBR165W	EMP70	P32802	667 aa		5.8	□□□□□ -1.48
UBS1	YBR165W	CTP1	P38152	299 aa		5.8	□□□□□ -1.48
UBS1	YBR165W	ATF1	P40353	525 aa		5.8	□□□□□ -1.48
UBS1	YBR165W	YIL077C	P40508	320 aa		5.8	□□□□□ -1.48
UBS1	YBR165W	MPS3	P47069	682 aa		5.8	□□□□□ -1.48
UBS1	YBR165W	YGR153W	P48238	217 aa		5.8	□□□□□ -1.48
UBS1	YBR165W	RFX1	P48743	811 aa		5.8	□□□□□ -1.48
UBS1	YBR165W	GPG1	P53130	126 aa		5.8	□□□□□ -1.48
UBS1	YBR165W	YGR151C	P53287	111 aa		5.8	□□□□□ -1.48
UBS1	YBR165W	ECM9	Q02202	377 aa		5.8	□□□□□ -1.48
UBS1	YBR165W	YPS7	Q06325	596 aa		5.8	□□□□□ -1.48
UBS1	YBR165W	YFT2	Q06676	274 aa		5.8	□□□□□ -1.48
UBS1	YBR165W	CUE2	P36075	443 aa	Known RBP	5.79	□□□□□ -1.48
UBS1	YBR165W	GMH1	P36125	273 aa		5.79	□□□□□ -1.48
UBS1	YBR165W	COS111	P38308	924 aa		5.79	□□□□□ -1.48
UBS1	YBR165W	KHA1	P40309	873 aa		5.79	□□□□□ -1.48
UBS1	YBR165W	BMS1	Q08965	1183 aa	Known RBP	5.79	□□□□□ -1.48
UBS1	YBR165W	YTM1	Q12024	460 aa	Predicted RBP	5.79	□□□□□ -1.48
UBS1	YBR165W	RPN13	O13563	156 aa		5.78	□□□□□ -1.48
UBS1	YBR165W	ADY2	P25613	283 aa		5.78	□□□□□ -1.48
UBS1	YBR165W	YEL020C	P39994	560 aa		5.78	□□□□□ -1.48
UBS1	YBR165W	NOP15	P53927	220 aa	Predicted RBP	5.78	□□□□□ -1.48
UBS1	YBR165W	YDL086W	Q07505	273 aa		5.78	□□□□□ -1.48
UBS1	YBR165W	NDJ1	Q12366	352 aa		5.78	□□□□□ -1.48
UBS1	YBR165W	RPS21B	Q3E754	87 aa	Known RBP	5.78	□□□□□ -1.48
UBS1	YBR165W	APM4	Q99186	491 aa		5.78	□□□□□ -1.48
UBS1	YBR165W	SEC15	P22224	910 aa		5.77	□□□□□ -1.49
UBS1	YBR165W	PRP22	P24384	1145 aa	Known RBP	5.77	□□□□□ -1.49
UBS1	YBR165W	PPZ2	P33329	710 aa		5.77	□□□□□ -1.49
UBS1	YBR165W	YHR097C	P38809	366 aa	Known RBP	5.77	□□□□□ -1.49
UBS1	YBR165W	OAF1	P39720	1047 aa	Predicted RBP	5.77	□□□□□ -1.49
UBS1	YBR165W	BUD8	P41698	603 aa		5.77	□□□□□ -1.49
UBS1	YBR165W	PXA1	P41909	870 aa		5.77	□□□□□ -1.49
UBS1	YBR165W	IES1	P43579	692 aa		5.77	□□□□□ -1.49
UBS1	YBR165W	APM1	Q00776	475 aa	Predicted RBP	5.77	□□□□□ -1.49
UBS1	YBR165W	STP4	Q07351	490 aa		5.77	□□□□□ -1.49
UBS1	YBR165W	HFI1	Q12060	488 aa		5.77	□□□□□ -1.49
UBS1	YBR165W	BNR1	P40450	1375 aa		5.77	□□□□□ -1.49
UBS1	YBR165W	NUP145	P49687	1317 aa		5.76	□□□□□ -1.49
UBS1	YBR165W	RPS17A	P02407	136 aa	Known RBP	5.76	□□□□□ -1.49
UBS1	YBR165W	RPS9B	P05755	195 aa	Known RBP	5.76	□□□□□ -1.49
UBS1	YBR165W	TUB1	P09733	447 aa	Known RBP	5.76	□□□□□ -1.49
UBS1	YBR165W	RPS17B	P14127	136 aa	Known RBP	5.76	□□□□□ -1.49
UBS1	YBR165W	SEC65	P29478	273 aa		5.76	□□□□□ -1.49
UBS1	YBR165W	NTH1	P32356	751 aa		5.76	□□□□□ -1.49
UBS1	YBR165W	OAF3	P36023	863 aa		5.76	□□□□□ -1.49
UBS1	YBR165W	KSP1	P38691	1029 aa	Known RBP	5.76	□□□□□ -1.49
UBS1	YBR165W	RIX1	P38883	763 aa	Predicted RBP	5.76	□□□□□ -1.49
UBS1	YBR165W	GPP1	P41277	250 aa	Known RBP	5.76	□□□□□ -1.49
UBS1	YBR165W	MNN11	P46985	422 aa	Known RBP	5.76	□□□□□ -1.49
UBS1	YBR165W	HFD1	Q04458	532 aa		5.76	□□□□□ -1.49
UBS1	YBR165W	YSH1	Q06224	779 aa	Predicted RBP	5.76	□□□□□ -1.49
UBS1	YBR165W	ARO10	Q06408	635 aa		5.76	□□□□□ -1.49
UBS1	YBR165W	KCC4	P25389	1037 aa		5.75	□□□□□ -1.49
UBS1	YBR165W	DID4	P36108	232 aa		5.75	□□□□□ -1.49
UBS1	YBR165W	FLO10	P36170	1169 aa		5.75	□□□□□ -1.49
UBS1	YBR165W	PPN1	Q04119	674 aa		5.75	□□□□□ -1.49
UBS1	YBR165W	YGR237C	P50089	785 aa		5.74	□□□□□ -1.49
UBS1	YBR165W	YML122C	Q03207	126 aa		5.74	□□□□□ -1.49
UBS1	YBR165W	NSE5	Q03718	556 aa		5.74	□□□□□ -1.49
UBS1	YBR165W	IZH3	Q07959	543 aa		5.74	□□□□□ -1.49
UBS1	YBR165W	SPO11	P23179	398 aa		5.73	□□□□□ -1.49
UBS1	YBR165W	APL3	P38065	1025 aa		5.73	□□□□□ -1.49
UBS1	YBR165W	MUP3	P38734	546 aa		5.73	□□□□□ -1.49
UBS1	YBR165W	PAC2	P39937	518 aa		5.73	□□□□□ -1.49
UBS1	YBR165W	MRK1	P50873	501 aa		5.73	□□□□□ -1.49
UBS1	YBR165W	YGL081W	P53156	320 aa		5.73	□□□□□ -1.49
UBS1	YBR165W	SPO1	P53541	631 aa		5.73	□□□□□ -1.49
UBS1	YBR165W	YHM2	Q04013	314 aa		5.73	□□□□□ -1.49
UBS1	YBR165W	RKI1	Q12189	258 aa		5.73	□□□□□ -1.49
UBS1	YBR165W	PRE4	P30657	266 aa		5.72	□□□□□ -1.49
UBS1	YBR165W	YMC2	P38087	329 aa		5.72	□□□□□ -1.49
UBS1	YBR165W	FAT1	P38225	669 aa		5.72	□□□□□ -1.49
UBS1	YBR165W	NMA2	P53204	395 aa		5.72	□□□□□ -1.49
UBS1	YBR165W	SPC98	P53540	846 aa		5.72	□□□□□ -1.49
UBS1	YBR165W	SNF12	P53628	566 aa		5.72	□□□□□ -1.49
UBS1	YBR165W	RPS21A	P0C0V8	87 aa	Known RBP	5.71	□□□□□ -1.5
UBS1	YBR165W	DUN1	P39009	513 aa		5.71	□□□□□ -1.5
UBS1	YBR165W	MIT1	P40002	666 aa		5.71	□□□□□ -1.5
UBS1	YBR165W	TAF4	P50105	388 aa		5.71	□□□□□ -1.5
UBS1	YBR165W	PTA1	Q01329	785 aa	Predicted RBP	5.71	□□□□□ -1.5
UBS1	YBR165W	LGE1	Q02796	332 aa	Known RBP	5.71	□□□□□ -1.5
UBS1	YBR165W	FDC1	Q03034	503 aa		5.71	□□□□□ -1.5
UBS1	YBR165W	FAP7	Q12055	197 aa	Predicted RBP	5.71	□□□□□ -1.5
UBS1	YBR165W	LAM4	P38800	1345 aa		5.71	□□□□□ -1.5
UBS1	YBR165W	GLN4	P13188	809 aa	Known RBP	5.7	□□□□□ -1.5
UBS1	YBR165W	CDC26	P14724	124 aa		5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms