RNA–Protein interactions for RNA: YBR110W

ALG1, Transcript of Mannosyltransferase, yeast

Gene ALG1, Length 1,350 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Mitochondria .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ALG1	YBR110W	CHS5	Q12114	671 aa	Known RBP	5.02	□□□□□ -1.61
ALG1	YBR110W	NUP145	P49687	1317 aa		5.01	□□□□□ -1.61
ALG1	YBR110W	ABF1	P14164	731 aa		5.01	□□□□□ -1.61
ALG1	YBR110W	YPT53	P36019	220 aa		5.01	□□□□□ -1.61
ALG1	YBR110W	CCT7	P42943	550 aa	Known RBP	5.01	□□□□□ -1.61
ALG1	YBR110W	HFD1	Q04458	532 aa		5.01	□□□□□ -1.61
ALG1	YBR110W	VBA4	Q04602	768 aa	Known RBP	5.01	□□□□□ -1.61
ALG1	YBR110W	USV1	Q12132	391 aa		5.01	□□□□□ -1.61
ALG1	YBR110W	SEC15	P22224	910 aa		5	□□□□□ -1.61
ALG1	YBR110W	FEN2	P25621	512 aa	Known RBP	5	□□□□□ -1.61
ALG1	YBR110W	TDP1	P38319	544 aa		5	□□□□□ -1.61
ALG1	YBR110W	MNN11	P46985	422 aa	Known RBP	5	□□□□□ -1.61
ALG1	YBR110W	TAH11	P47112	604 aa		5	□□□□□ -1.61
ALG1	YBR110W	YRB30	P53107	440 aa	Predicted RBP	5	□□□□□ -1.61
ALG1	YBR110W	ECM9	Q02202	377 aa		5	□□□□□ -1.61
ALG1	YBR110W	PRP22	P24384	1145 aa	Known RBP	4.99	□□□□□ -1.61
ALG1	YBR110W	DID4	P36108	232 aa		4.99	□□□□□ -1.61
ALG1	YBR110W	UBS1	P38290	277 aa		4.99	□□□□□ -1.61
ALG1	YBR110W	YIL166C	P40445	542 aa		4.99	□□□□□ -1.61
ALG1	YBR110W	YGR237C	P50089	785 aa		4.99	□□□□□ -1.61
ALG1	YBR110W	GPG1	P53130	126 aa		4.99	□□□□□ -1.61
ALG1	YBR110W	SUT2	Q12286	268 aa		4.99	□□□□□ -1.61
ALG1	YBR110W	APM4	Q99186	491 aa		4.99	□□□□□ -1.61
ALG1	YBR110W	IME1	P21190	360 aa		4.98	□□□□□ -1.61
ALG1	YBR110W	NTH1	P32356	751 aa		4.98	□□□□□ -1.61
ALG1	YBR110W	HXT6	P39003	570 aa	Known RBP	4.98	□□□□□ -1.61
ALG1	YBR110W	HXT7	P39004	570 aa		4.98	□□□□□ -1.61
ALG1	YBR110W	OAF1	P39720	1047 aa	Predicted RBP	4.98	□□□□□ -1.61
ALG1	YBR110W	YIL077C	P40508	320 aa		4.98	□□□□□ -1.61
ALG1	YBR110W	MPS3	P47069	682 aa		4.98	□□□□□ -1.61
ALG1	YBR110W	NOP15	P53927	220 aa	Predicted RBP	4.98	□□□□□ -1.61
ALG1	YBR110W	PPN1	Q04119	674 aa		4.98	□□□□□ -1.61
ALG1	YBR110W	YPS7	Q06325	596 aa		4.98	□□□□□ -1.61
ALG1	YBR110W	YFT2	Q06676	274 aa		4.98	□□□□□ -1.61
ALG1	YBR110W	FAP7	Q12055	197 aa	Predicted RBP	4.98	□□□□□ -1.61
ALG1	YBR110W	HFI1	Q12060	488 aa		4.98	□□□□□ -1.61
ALG1	YBR110W	RPS17A	P02407	136 aa	Known RBP	4.97	□□□□□ -1.61
ALG1	YBR110W	RPS9B	P05755	195 aa	Known RBP	4.97	□□□□□ -1.61
ALG1	YBR110W	RPS17B	P14127	136 aa	Known RBP	4.97	□□□□□ -1.61
ALG1	YBR110W	FUB1	P25659	250 aa		4.97	□□□□□ -1.61
ALG1	YBR110W	SEC65	P29478	273 aa		4.97	□□□□□ -1.61
ALG1	YBR110W	OAF3	P36023	863 aa		4.97	□□□□□ -1.61
ALG1	YBR110W	SET3	P36124	751 aa		4.97	□□□□□ -1.61
ALG1	YBR110W	CTP1	P38152	299 aa		4.97	□□□□□ -1.61
ALG1	YBR110W	COS111	P38308	924 aa		4.97	□□□□□ -1.61
ALG1	YBR110W	GPP1	P41277	250 aa	Known RBP	4.97	□□□□□ -1.61
ALG1	YBR110W	PXA1	P41909	870 aa		4.97	□□□□□ -1.61
ALG1	YBR110W	RFX1	P48743	811 aa		4.97	□□□□□ -1.61
ALG1	YBR110W	YGR151C	P53287	111 aa		4.97	□□□□□ -1.61
ALG1	YBR110W	RCR2	Q03446	210 aa	Known RBP	4.97	□□□□□ -1.61
ALG1	YBR110W	YDL086W	Q07505	273 aa		4.97	□□□□□ -1.61
ALG1	YBR110W	RPS21B	Q3E754	87 aa	Known RBP	4.97	□□□□□ -1.61
ALG1	YBR110W	ILV6	P25605	309 aa	Known RBP	4.96	□□□□□ -1.62
ALG1	YBR110W	GMH1	P36125	273 aa		4.96	□□□□□ -1.62
ALG1	YBR110W	PTA1	Q01329	785 aa	Predicted RBP	4.96	□□□□□ -1.62
ALG1	YBR110W	YML122C	Q03207	126 aa		4.96	□□□□□ -1.62
ALG1	YBR110W	BMS1	Q08965	1183 aa	Known RBP	4.96	□□□□□ -1.62
ALG1	YBR110W	RPN13	O13563	156 aa		4.95	□□□□□ -1.62
ALG1	YBR110W	KHA1	P40309	873 aa		4.95	□□□□□ -1.62
ALG1	YBR110W	BUD8	P41698	603 aa		4.95	□□□□□ -1.62
ALG1	YBR110W	IES1	P43579	692 aa		4.95	□□□□□ -1.62
ALG1	YBR110W	SPO1	P53541	631 aa		4.95	□□□□□ -1.62
ALG1	YBR110W	APM1	Q00776	475 aa	Predicted RBP	4.95	□□□□□ -1.62
ALG1	YBR110W	NSE5	Q03718	556 aa		4.95	□□□□□ -1.62
ALG1	YBR110W	YHM2	Q04013	314 aa		4.95	□□□□□ -1.62
ALG1	YBR110W	YSH1	Q06224	779 aa	Predicted RBP	4.95	□□□□□ -1.62
ALG1	YBR110W	STP4	Q07351	490 aa		4.95	□□□□□ -1.62
ALG1	YBR110W	KCC4	P25389	1037 aa		4.94	□□□□□ -1.62
ALG1	YBR110W	MSS1	P32559	526 aa	Predicted RBP	4.94	□□□□□ -1.62
ALG1	YBR110W	DUN1	P39009	513 aa		4.94	□□□□□ -1.62
ALG1	YBR110W	APL3	P38065	1025 aa		4.93	□□□□□ -1.62
ALG1	YBR110W	UBP12	P39538	1254 aa		4.93	□□□□□ -1.62
ALG1	YBR110W	ATF1	P40353	525 aa		4.93	□□□□□ -1.62
ALG1	YBR110W	ADY2	P25613	283 aa		4.92	□□□□□ -1.62
ALG1	YBR110W	EMP70	P32802	667 aa		4.92	□□□□□ -1.62
ALG1	YBR110W	PPZ2	P33329	710 aa		4.92	□□□□□ -1.62
ALG1	YBR110W	CUE2	P36075	443 aa	Known RBP	4.92	□□□□□ -1.62
ALG1	YBR110W	KSP1	P38691	1029 aa	Known RBP	4.92	□□□□□ -1.62
ALG1	YBR110W	YHR097C	P38809	366 aa	Known RBP	4.92	□□□□□ -1.62
ALG1	YBR110W	YEL020C	P39994	560 aa		4.92	□□□□□ -1.62
ALG1	YBR110W	ENP2	P48234	707 aa	Known RBP	4.92	□□□□□ -1.62
ALG1	YBR110W	TAF4	P50105	388 aa		4.92	□□□□□ -1.62
ALG1	YBR110W	TUB1	P09733	447 aa	Known RBP	4.91	□□□□□ -1.62
ALG1	YBR110W	RPS21A	P0C0V8	87 aa	Known RBP	4.91	□□□□□ -1.62
ALG1	YBR110W	GLN4	P13188	809 aa	Known RBP	4.91	□□□□□ -1.62
ALG1	YBR110W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
ALG1	YBR110W	SPO11	P23179	398 aa		4.91	□□□□□ -1.62
ALG1	YBR110W	PRE4	P30657	266 aa		4.91	□□□□□ -1.62
ALG1	YBR110W	FAT1	P38225	669 aa		4.91	□□□□□ -1.62
ALG1	YBR110W	MUP3	P38734	546 aa		4.91	□□□□□ -1.62
ALG1	YBR110W	DUG1	P43616	481 aa	Known RBP	4.91	□□□□□ -1.62
ALG1	YBR110W	RTS3	P53289	263 aa		4.91	□□□□□ -1.62
ALG1	YBR110W	FDC1	Q03034	503 aa		4.91	□□□□□ -1.62
ALG1	YBR110W	HLR1	Q04429	423 aa		4.91	□□□□□ -1.62
ALG1	YBR110W	IZH3	Q07959	543 aa		4.91	□□□□□ -1.62
ALG1	YBR110W	RKI1	Q12189	258 aa		4.91	□□□□□ -1.62
ALG1	YBR110W	VID28	P40547	921 aa		4.91	□□□□□ -1.62
ALG1	YBR110W	SPC98	P53540	846 aa		4.91	□□□□□ -1.62
ALG1	YBR110W	SUB1	P54000	292 aa	Known RBP	4.91	□□□□□ -1.62
ALG1	YBR110W	UFO1	Q04511	668 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms