RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 MUP1P50276 574 aa9.9□□□□□ -0.82
NME1NME1 PAP2P53632 584 aaKnown RBP9.9□□□□□ -0.82
NME1NME1 MTD1Q02046 320 aaKnown RBP9.9□□□□□ -0.82
NME1NME1 CLU1Q03690 1277 aaKnown RBP9.9□□□□□ -0.82
NME1NME1 PIF1P07271 859 aa9.89□□□□□ -0.83
NME1NME1 YEL076C-AP0CX16 216 aa9.89□□□□□ -0.83
NME1NME1 YLR464WP0CX17 216 aa9.89□□□□□ -0.83
NME1NME1 PGI1P12709 554 aaKnown RBP9.89□□□□□ -0.83
NME1NME1 SEC15P22224 910 aa9.89□□□□□ -0.83
NME1NME1 KIN82P25341 720 aa9.89□□□□□ -0.83
NME1NME1 YHR033WP38690 423 aa9.89□□□□□ -0.83
NME1NME1 RRP8P38961 392 aaKnown RBP9.89□□□□□ -0.83
NME1NME1 SAW1P39735 261 aa9.89□□□□□ -0.83
NME1NME1 STL1P39932 569 aa9.89□□□□□ -0.83
NME1NME1 YEL076CP39971 216 aa9.89□□□□□ -0.83
NME1NME1 EAF5P39995 279 aa9.89□□□□□ -0.83
NME1NME1 ELO3P40319 345 aa9.89□□□□□ -0.83
NME1NME1 YIL092WP40497 633 aa9.89□□□□□ -0.83
NME1NME1 HIS6P40545 261 aa9.89□□□□□ -0.83
NME1NME1 BUD8P41698 603 aa9.89□□□□□ -0.83
NME1NME1 MTL1P53214 551 aa9.89□□□□□ -0.83
NME1NME1 POM34Q12445 299 aa9.89□□□□□ -0.83
NME1NME1 GET2P40056 285 aa9.88□□□□□ -0.83
NME1NME1 ATG16Q03818 150 aa9.88□□□□□ -0.83
NME1NME1 NUR1Q12066 484 aa9.88□□□□□ -0.83
NME1NME1 RPS9BP05755 195 aaKnown RBP9.87□□□□□ -0.83
NME1NME1 PHO3P24031 467 aa9.87□□□□□ -0.83
NME1NME1 YPT7P32939 208 aa9.87□□□□□ -0.83
NME1NME1 BAP3P41815 604 aa9.87□□□□□ -0.83
NME1NME1 PSF3Q12146 194 aa9.87□□□□□ -0.83
NME1NME1 PMA1P05030 918 aaKnown RBP9.86□□□□□ -0.83
NME1NME1 HOP1P20050 605 aa9.86□□□□□ -0.83
NME1NME1 PEX1P24004 1043 aa9.86□□□□□ -0.83
NME1NME1 LYS9P38999 446 aa9.86□□□□□ -0.83
NME1NME1 ASK10P48361 1146 aa9.86□□□□□ -0.83
NME1NME1 CEF1Q03654 590 aaPredicted RBP9.86□□□□□ -0.83
NME1NME1 SDS22P36047 338 aa9.85□□□□□ -0.83
NME1NME1 KTR4P38131 464 aa9.85□□□□□ -0.83
NME1NME1 FUI1P38196 639 aa9.85□□□□□ -0.83
NME1NME1 CCT3P39077 534 aaKnown RBP9.85□□□□□ -0.83
NME1NME1 SPO1P53541 631 aa9.85□□□□□ -0.83
NME1NME1 YBR053CP38235 358 aa9.84□□□□□ -0.83
NME1NME1 NUP60P39705 539 aa9.84□□□□□ -0.83
NME1NME1 HOS4P40480 1083 aa9.84□□□□□ -0.83
NME1NME1 VPS5Q92331 675 aa9.84□□□□□ -0.83
NME1NME1 YHL041WP38730 149 aa9.83□□□□□ -0.84
NME1NME1 BUL1P48524 976 aa9.83□□□□□ -0.84
NME1NME1 THI22Q06490 572 aa9.83□□□□□ -0.84
NME1NME1 YOL114CQ12322 202 aa9.83□□□□□ -0.84
NME1NME1 HCM1P25364 564 aa9.82□□□□□ -0.84
NME1NME1 DPB3P27344 201 aa9.82□□□□□ -0.84
NME1NME1 EFT1P32324 842 aaKnown RBP9.82□□□□□ -0.84
NME1NME1 FMO1P38866 432 aa9.82□□□□□ -0.84
NME1NME1 SSP120P39931 234 aaKnown RBP9.82□□□□□ -0.84
NME1NME1 QRI7P43122 407 aa9.82□□□□□ -0.84
NME1NME1 SQS1P53866 767 aaKnown RBP9.82□□□□□ -0.84
NME1NME1 CEG1Q01159 459 aaPredicted RBP9.82□□□□□ -0.84
NME1NME1 AIM39Q08223 395 aa9.82□□□□□ -0.84
NME1NME1 PRE4P30657 266 aa9.81□□□□□ -0.84
NME1NME1 MVD1P32377 396 aaKnown RBP9.81□□□□□ -0.84
NME1NME1 PTH2P34222 208 aa9.81□□□□□ -0.84
NME1NME1 ERG4P25340 473 aa9.8□□□□□ -0.84
NME1NME1 PRM2P40534 656 aa9.8□□□□□ -0.84
NME1NME1 PHO23P50947 330 aa9.8□□□□□ -0.84
NME1NME1 PHO81P17442 1178 aa9.79□□□□□ -0.84
NME1NME1 CTS1P29029 562 aa9.79□□□□□ -0.84
NME1NME1 TGL1P34163 548 aa9.79□□□□□ -0.84
NME1NME1 TAF5P38129 798 aa9.79□□□□□ -0.84
NME1NME1 YGR021WP53212 290 aa9.79□□□□□ -0.84
NME1NME1 FRE5Q08908 694 aa9.79□□□□□ -0.84
NME1NME1 ARP7Q12406 477 aa9.79□□□□□ -0.84
NME1NME1 MSS18P08593 268 aa9.78□□□□□ -0.84
NME1NME1 TRX2P22803 104 aaKnown RBP9.78□□□□□ -0.84
NME1NME1 HRR25P29295 494 aaKnown RBP9.78□□□□□ -0.84
NME1NME1 MRS6P32864 603 aaKnown RBP9.78□□□□□ -0.84
NME1NME1 BCD1P38772 366 aa9.78□□□□□ -0.84
NME1NME1 UBP5P39944 805 aa9.78□□□□□ -0.84
NME1NME1 IES5P40060 125 aa9.78□□□□□ -0.84
NME1NME1 SCS2P40075 244 aaKnown RBP9.78□□□□□ -0.84
NME1NME1 PIG2P40187 538 aa9.78□□□□□ -0.84
NME1NME1 PUS4P48567 403 aaKnown RBP9.78□□□□□ -0.84
NME1NME1 PEF1P53238 335 aa9.78□□□□□ -0.84
NME1NME1 TEP1P53916 434 aa9.78□□□□□ -0.84
NME1NME1 HIS7P33734 552 aaKnown RBP9.77□□□□□ -0.85
NME1NME1 REV7P38927 245 aa9.77□□□□□ -0.85
NME1NME1 YIL077CP40508 320 aa9.77□□□□□ -0.85
NME1NME1 YJL163CP46996 555 aa9.77□□□□□ -0.85
NME1NME1 UBC11P52492 156 aa9.77□□□□□ -0.85
NME1NME1 MNT2P53059 558 aa9.77□□□□□ -0.85
NME1NME1 SUB1P54000 292 aaKnown RBP9.77□□□□□ -0.85
NME1NME1 HLR1Q04429 423 aa9.77□□□□□ -0.85
NME1NME1 CLF1Q12309 687 aaPredicted RBP9.77□□□□□ -0.85
NME1NME1 TRM13Q12383 476 aa9.77□□□□□ -0.85
NME1NME1 HMG2P12684 1045 aa9.76□□□□□ -0.85
NME1NME1 CWH43P25618 953 aa9.76□□□□□ -0.85
NME1NME1 PET309P32522 965 aaPredicted RBP9.76□□□□□ -0.85
NME1NME1 RNT1Q02555 471 aa9.76□□□□□ -0.85
NME1NME1 IRC13Q08630 104 aa9.76□□□□□ -0.85
NME1NME1 RTK1Q12100 620 aaPredicted RBP9.76□□□□□ -0.85
NME1NME1 NTO1Q12311 748 aa9.76□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms