RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 TDRD7Q8NHU6 1098 aaKnown RBP21.22■□□□□ 0.99
PHGDH-230ENST00000641927 JAG2Q9Y219 1238 aa21.22■□□□□ 0.99
PHGDH-230ENST00000641927 ANTXR1Q9H6X2 564 aa21.21■□□□□ 0.99
PHGDH-230ENST00000641927 FER1L6Q2WGJ9 1857 aa21.21■□□□□ 0.99
PHGDH-230ENST00000641927 IL1R1P14778 569 aa21.21■□□□□ 0.99
PHGDH-230ENST00000641927 IARSP41252 1262 aaKnown RBP21.21■□□□□ 0.99
PHGDH-230ENST00000641927 RASSF7Q02833 373 aa21.21■□□□□ 0.99
PHGDH-230ENST00000641927 FBXW7Q969H0 707 aa21.21■□□□□ 0.99
PHGDH-230ENST00000641927 FSD1Q9BTV5 496 aa21.21■□□□□ 0.99
PHGDH-230ENST00000641927 COL1A1P02452 1464 aaPredicted RBP21.2■□□□□ 0.98
PHGDH-230ENST00000641927 ECE2O60344 883 aa21.2■□□□□ 0.98
PHGDH-230ENST00000641927 CYP2E1P05181 493 aaPredicted RBP21.2■□□□□ 0.98
PHGDH-230ENST00000641927 YBX3P16989 372 aaKnown RBP eCLIP21.2■□□□□ 0.983e-7■□□□□ 9.3
PHGDH-230ENST00000641927 TTF1Q15361 905 aaPredicted RBP21.2■□□□□ 0.98
PHGDH-230ENST00000641927 TBC1D9Q6ZT07 1266 aa21.2■□□□□ 0.98
PHGDH-230ENST00000641927 AKAP11Q9UKA4 1901 aa21.2■□□□□ 0.98
PHGDH-230ENST00000641927 MYH13Q9UKX3 1938 aa21.2■□□□□ 0.98
PHGDH-230ENST00000641927 GPR162Q16538 588 aa21.19■□□□□ 0.98
PHGDH-230ENST00000641927 PODNQ7Z5L7 613 aa21.19■□□□□ 0.98
PHGDH-230ENST00000641927 VPS33BQ9H267 617 aa21.19■□□□□ 0.98
PHGDH-230ENST00000641927 ABCF2Q9UG63 623 aa21.19■□□□□ 0.98
PHGDH-230ENST00000641927 LTBP3Q9NS15 1303 aa21.18■□□□□ 0.98
PHGDH-230ENST00000641927 GTF2IP78347 998 aa21.18■□□□□ 0.98
PHGDH-230ENST00000641927 NIM1KQ8IY84 436 aa21.18■□□□□ 0.98
PHGDH-230ENST00000641927 KBTBD3Q8NAB2 608 aa21.18■□□□□ 0.98
PHGDH-230ENST00000641927 PIH1D3Q9NQM4 214 aaKnown RBP21.18■□□□□ 0.98
PHGDH-230ENST00000641927 AK9Q5TCS8 1911 aa21.18■□□□□ 0.98
PHGDH-230ENST00000641927 CDC45O75419 566 aa21.17■□□□□ 0.98
PHGDH-230ENST00000641927 IDH1O75874 414 aaKnown RBP21.17■□□□□ 0.98
PHGDH-230ENST00000641927 WDR66Q8TBY9 1149 aa21.17■□□□□ 0.98
PHGDH-230ENST00000641927 LRP2BPQ9P2M1 347 aa21.17■□□□□ 0.98
PHGDH-230ENST00000641927 PDS5AQ29RF7 1337 aaKnown RBP21.17■□□□□ 0.98
PHGDH-230ENST00000641927 JDP2Q8WYK2 163 aa21.16■□□□□ 0.98
PHGDH-230ENST00000641927 TTLL5Q6EMB2 1281 aa21.15■□□□□ 0.98
PHGDH-230ENST00000641927 CASC1Q6TDU7 716 aa21.15■□□□□ 0.98
PHGDH-230ENST00000641927 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.15■□□□□ 0.981e-14■□□□□ 11
PHGDH-230ENST00000641927 KCNQ5Q9NR82 932 aa21.15■□□□□ 0.98
PHGDH-230ENST00000641927 DIAPH3Q9NSV4 1193 aa21.15■□□□□ 0.98
PHGDH-230ENST00000641927 UTRNP46939 3433 aa21.14■□□□□ 0.98
PHGDH-230ENST00000641927 ZBTB22O15209 634 aa21.14■□□□□ 0.97
PHGDH-230ENST00000641927 MAP3K12Q12852 859 aa21.14■□□□□ 0.97
PHGDH-230ENST00000641927 MFSD14BQ5SR56 506 aa21.14■□□□□ 0.97
PHGDH-230ENST00000641927 ZGPATQ8N5A5 531 aaKnown RBP21.14■□□□□ 0.97
PHGDH-230ENST00000641927 RAI14Q9P0K7 980 aa21.14■□□□□ 0.97
PHGDH-230ENST00000641927 FAM205AQ6ZU69 1335 aa21.13■□□□□ 0.97
PHGDH-230ENST00000641927 LRRFIP1Q32MZ4 808 aaKnown RBP21.13■□□□□ 0.97
PHGDH-230ENST00000641927 TBC1D22AQ8WUA7 517 aa21.13■□□□□ 0.97
PHGDH-230ENST00000641927 ZNRF3Q9ULT6 936 aa21.13■□□□□ 0.97
PHGDH-230ENST00000641927 CHD4Q14839 1912 aa21.13■□□□□ 0.97
PHGDH-230ENST00000641927 COL4A5P29400 1685 aa21.13■□□□□ 0.97
PHGDH-230ENST00000641927 USP17L3A6NCW0 530 aa21.12■□□□□ 0.97
PHGDH-230ENST00000641927 USP17L4A6NCW7 530 aa21.12■□□□□ 0.97
PHGDH-230ENST00000641927 YDJCA8MPS7 323 aa21.12■□□□□ 0.97
PHGDH-230ENST00000641927 HIP1O00291 1037 aa21.12■□□□□ 0.97
PHGDH-230ENST00000641927 ERICH6Q7L0X2 663 aa21.12■□□□□ 0.97
PHGDH-230ENST00000641927 USP17L1Q7RTZ2 530 aa21.12■□□□□ 0.97
PHGDH-230ENST00000641927 SALL1Q9NSC2 1324 aa21.12■□□□□ 0.97
PHGDH-230ENST00000641927 LMNB1P20700 586 aa21.12■□□□□ 0.97
PHGDH-230ENST00000641927 CHMLP26374 656 aa21.12■□□□□ 0.97
PHGDH-230ENST00000641927 PRELPP51888 382 aa21.12■□□□□ 0.97
PHGDH-230ENST00000641927 SLC9C2Q5TAH2 1124 aa21.12■□□□□ 0.97
PHGDH-230ENST00000641927 STRIP1Q5VSL9 837 aa21.12■□□□□ 0.97
PHGDH-230ENST00000641927 SPTY2D1Q68D10 685 aaPredicted RBP21.12■□□□□ 0.97
PHGDH-230ENST00000641927 ZSCAN25Q6NSZ9 544 aa21.12■□□□□ 0.97
PHGDH-230ENST00000641927 RAD17O75943 681 aa21.11■□□□□ 0.97
PHGDH-230ENST00000641927 LDHBP07195 334 aaKnown RBP21.11■□□□□ 0.97
PHGDH-230ENST00000641927 PRDX5P30044 214 aa21.11■□□□□ 0.97
PHGDH-230ENST00000641927 C8orf34Q49A92 452 aa21.11■□□□□ 0.97
PHGDH-230ENST00000641927 CWC27Q6UX04 472 aaKnown RBP21.11■□□□□ 0.97
PHGDH-230ENST00000641927 MXD3Q9BW11 206 aa21.11■□□□□ 0.97
PHGDH-230ENST00000641927 RNF113AO15541 343 aaKnown RBP21.1■□□□□ 0.97
PHGDH-230ENST00000641927 CHGBP05060 677 aa21.1■□□□□ 0.97
PHGDH-230ENST00000641927 DZIP1Q86YF9 867 aaKnown RBP21.1■□□□□ 0.97
PHGDH-230ENST00000641927 MAGEB6Q8N7X4 407 aa21.1■□□□□ 0.97
PHGDH-230ENST00000641927 MYO5AQ9Y4I1 1855 aaKnown RBP21.1■□□□□ 0.97
PHGDH-230ENST00000641927 RFX7Q2KHR2 1363 aa21.1■□□□□ 0.97
PHGDH-230ENST00000641927 GRIN3BO60391 1043 aa21.09■□□□□ 0.97
PHGDH-230ENST00000641927 ZFYP08048 801 aaPredicted RBP21.09■□□□□ 0.97
PHGDH-230ENST00000641927 SLFNL1Q499Z3 407 aa21.09■□□□□ 0.97
PHGDH-230ENST00000641927 SCN9AQ15858 1988 aa21.09■□□□□ 0.97
PHGDH-230ENST00000641927 PDE6AP16499 860 aa21.09■□□□□ 0.97
PHGDH-230ENST00000641927 NMIQ13287 307 aaPredicted RBP21.09■□□□□ 0.97
PHGDH-230ENST00000641927 FAM227BQ96M60 508 aa21.09■□□□□ 0.97
PHGDH-230ENST00000641927 CCDC88AQ3V6T2 1871 aa21.08■□□□□ 0.97
PHGDH-230ENST00000641927 ZNF532Q9HCE3 1301 aa21.08■□□□□ 0.97
PHGDH-230ENST00000641927 DOCK2Q92608 1830 aa21.08■□□□□ 0.97
PHGDH-230ENST00000641927 F8W031 263 aaPredicted RBP21.08■□□□□ 0.96
PHGDH-230ENST00000641927 ADD2P35612 726 aa21.08■□□□□ 0.96
PHGDH-230ENST00000641927 MECOMQ03112 1051 aa21.08■□□□□ 0.96
PHGDH-230ENST00000641927 GRIK5Q16478 980 aa21.08■□□□□ 0.96
PHGDH-230ENST00000641927 DACT2Q5SW24 774 aa21.08■□□□□ 0.96
PHGDH-230ENST00000641927 CERS5Q8N5B7 392 aa21.08■□□□□ 0.96
PHGDH-230ENST00000641927 RUFY2Q8WXA3 655 aa21.08■□□□□ 0.96
PHGDH-230ENST00000641927 NAA16Q6N069 864 aaPredicted RBP21.07■□□□□ 0.96
PHGDH-230ENST00000641927 TICAM2Q86XR7 235 aa21.07■□□□□ 0.96
PHGDH-230ENST00000641927 RNF181Q9P0P0 153 aa21.07■□□□□ 0.96
PHGDH-230ENST00000641927 A0A0D9SFI3 127 aa21.06■□□□□ 0.96
PHGDH-230ENST00000641927 PSMD14O00487 310 aa21.06■□□□□ 0.96
PHGDH-230ENST00000641927 EIF6P56537 245 aaKnown RBP21.06■□□□□ 0.96
PHGDH-230ENST00000641927 CXCL9Q07325 125 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms