RNA–Protein interactions for RNA: ENST00000641104.1

MACF1-235, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-235ENST00000641104 RBM28Q9NW13 759 aaKnown RBP13.59□□□□□ -0.23
MACF1-235ENST00000641104 TFCP2L1Q9NZI6 479 aa13.59□□□□□ -0.23
MACF1-235ENST00000641104 PTPDC1A2A3K4 754 aa13.58□□□□□ -0.23
MACF1-235ENST00000641104 TUBB4AP04350 444 aa13.58□□□□□ -0.23
MACF1-235ENST00000641104 PPM1FP49593 454 aaPredicted RBP13.58□□□□□ -0.23
MACF1-235ENST00000641104 CCDC186Q7Z3E2 898 aa13.58□□□□□ -0.23
MACF1-235ENST00000641104 BICC1Q9H694 974 aaKnown RBP13.58□□□□□ -0.23
MACF1-235ENST00000641104 HELLSQ9NRZ9 838 aa13.58□□□□□ -0.23
MACF1-235ENST00000641104 FAM13AO94988 1023 aa13.58□□□□□ -0.24
MACF1-235ENST00000641104 LMBR1Q8WVP7 490 aa13.58□□□□□ -0.24
MACF1-235ENST00000641104 JDP2Q8WYK2 163 aa13.58□□□□□ -0.24
MACF1-235ENST00000641104 LRRC45Q96CN5 670 aa13.58□□□□□ -0.24
MACF1-235ENST00000641104 TCHPQ9BT92 498 aa13.58□□□□□ -0.24
MACF1-235ENST00000641104 ABCC10Q5T3U5 1492 aa13.58□□□□□ -0.24
MACF1-235ENST00000641104 KRT83P78385 493 aa13.58□□□□□ -0.24
MACF1-235ENST00000641104 RASAL2Q9UJF2 1139 aa13.58□□□□□ -0.24
MACF1-235ENST00000641104 MRVI1Q9Y6F6 885 aa13.58□□□□□ -0.24
MACF1-235ENST00000641104 NUP153P49790 1475 aaKnown RBP13.58□□□□□ -0.24
MACF1-235ENST00000641104 PABPN1LA6NDY0 278 aaKnown RBP13.58□□□□□ -0.24
MACF1-235ENST00000641104 HS2ST1Q7LGA3 356 aa13.58□□□□□ -0.24
MACF1-235ENST00000641104 INTS4Q96HW7 963 aaKnown RBP13.58□□□□□ -0.24
MACF1-235ENST00000641104 DENND2AQ9ULE3 1009 aa13.58□□□□□ -0.24
MACF1-235ENST00000641104 CHMLP26374 656 aa13.57□□□□□ -0.24
MACF1-235ENST00000641104 CHST3Q7LGC8 479 aa13.57□□□□□ -0.24
MACF1-235ENST00000641104 PLEKHM2Q8IWE5 1019 aa13.57□□□□□ -0.24
MACF1-235ENST00000641104 PHACTR3Q96KR7 559 aa13.57□□□□□ -0.24
MACF1-235ENST00000641104 CALCOCO1Q9P1Z2 691 aa13.57□□□□□ -0.24
MACF1-235ENST00000641104 A0A1W2PP64 1363 aa13.57□□□□□ -0.24
MACF1-235ENST00000641104 TRAPPC8Q9Y2L5 1435 aa13.57□□□□□ -0.24
MACF1-235ENST00000641104 SYT1P21579 422 aa13.57□□□□□ -0.24
MACF1-235ENST00000641104 TTC6Q86TZ1 520 aa13.57□□□□□ -0.24
MACF1-235ENST00000641104 SMC5Q8IY18 1101 aa13.57□□□□□ -0.24
MACF1-235ENST00000641104 KRT24Q2M2I5 525 aa13.57□□□□□ -0.24
MACF1-235ENST00000641104 NAP1L4Q99733 375 aaKnown RBP13.57□□□□□ -0.24
MACF1-235ENST00000641104 BABAM1Q9NWV8 329 aa13.57□□□□□ -0.24
MACF1-235ENST00000641104 DTHD1Q6ZMT9 781 aa13.57□□□□□ -0.24
MACF1-235ENST00000641104 DNAI1Q9UI46 699 aa13.57□□□□□ -0.24
MACF1-235ENST00000641104 TESK2Q96S53 571 aa13.57□□□□□ -0.24
MACF1-235ENST00000641104 DYNC1I1O14576 645 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 POLD1P28340 1107 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 NCBP1Q09161 790 aaKnown RBP13.56□□□□□ -0.24
MACF1-235ENST00000641104 C8orf34Q49A92 452 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 GIMAP7Q8NHV1 300 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 MAP3K19Q56UN5 1328 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 TYRO3Q06418 890 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 RBM17Q96I25 401 aaKnown RBP13.56□□□□□ -0.24
MACF1-235ENST00000641104 KRT86O43790 486 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 RLBP1P12271 317 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 FERP16591 822 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 MCM7P33993 719 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 PLS1Q14651 629 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 ATL3Q6DD88 541 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 PPP1R14CQ8TAE6 165 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 KIF5AQ12840 1032 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 CDCA7Q9BWT1 371 aaPredicted RBP13.56□□□□□ -0.24
MACF1-235ENST00000641104 TNNQ9UQP3 1299 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 CLEC11AQ9Y240 323 aa13.56□□□□□ -0.24
MACF1-235ENST00000641104 PTGS1P23219 599 aa13.55□□□□□ -0.24
MACF1-235ENST00000641104 LMOD1P29536 600 aaPredicted RBP13.55□□□□□ -0.24
MACF1-235ENST00000641104 NOLC1Q14978 699 aaKnown RBP eCLIP13.55□□□□□ -0.24
MACF1-235ENST00000641104 PARP10Q53GL7 1025 aa13.55□□□□□ -0.24
MACF1-235ENST00000641104 IQUBQ8NA54 791 aa13.55□□□□□ -0.24
MACF1-235ENST00000641104 YTHDC2Q9H6S0 1430 aaKnown RBP13.55□□□□□ -0.24
MACF1-235ENST00000641104 RIMBP2O15034 1052 aa13.55□□□□□ -0.24
MACF1-235ENST00000641104 PLBD2Q8NHP8 589 aa13.55□□□□□ -0.24
MACF1-235ENST00000641104 CCDC42Q96M95 316 aa13.55□□□□□ -0.24
MACF1-235ENST00000641104 SRRTQ9BXP5 876 aaKnown RBP13.55□□□□□ -0.24
MACF1-235ENST00000641104 PARP1P09874 1014 aaKnown RBP13.55□□□□□ -0.24
MACF1-235ENST00000641104 NEK11Q8NG66 645 aa13.55□□□□□ -0.24
MACF1-235ENST00000641104 SREK1Q8WXA9 508 aaKnown RBP13.55□□□□□ -0.24
MACF1-235ENST00000641104 A0A1W2PRG0 241 aa13.55□□□□□ -0.24
MACF1-235ENST00000641104 TRAPPC3LQ5T215 181 aa13.55□□□□□ -0.24
MACF1-235ENST00000641104 CCDC77Q9BR77 488 aa13.55□□□□□ -0.24
MACF1-235ENST00000641104 TBX22Q9Y458 520 aa13.55□□□□□ -0.24
MACF1-235ENST00000641104 MBD4O95243 580 aa13.54□□□□□ -0.24
MACF1-235ENST00000641104 GTF2F1P35269 517 aaKnown RBP eCLIP13.54□□□□□ -0.24
MACF1-235ENST00000641104 RGS22Q8NE09 1264 aa13.54□□□□□ -0.24
MACF1-235ENST00000641104 CARD14Q9BXL6 1004 aa13.54□□□□□ -0.24
MACF1-235ENST00000641104 SSX2IPQ9Y2D8 614 aa13.54□□□□□ -0.24
MACF1-235ENST00000641104 CTAGE9A4FU28 777 aa13.54□□□□□ -0.24
MACF1-235ENST00000641104 EYA2O00167 538 aa13.54□□□□□ -0.24
MACF1-235ENST00000641104 KCNA6P17658 529 aa13.54□□□□□ -0.24
MACF1-235ENST00000641104 SH2D4AQ9H788 454 aa13.54□□□□□ -0.24
MACF1-235ENST00000641104 RAB3GAP1Q15042 981 aa13.54□□□□□ -0.24
MACF1-235ENST00000641104 VTI1AQ96AJ9 217 aa13.54□□□□□ -0.24
MACF1-235ENST00000641104 ZNF830Q96NB3 372 aaPredicted RBP13.54□□□□□ -0.24
MACF1-235ENST00000641104 ARFGAP3Q9NP61 516 aa13.54□□□□□ -0.24
MACF1-235ENST00000641104 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.54□□□□□ -0.242e-6■■□□□ 13.9
MACF1-235ENST00000641104 HOXB7P09629 217 aa13.54□□□□□ -0.24
MACF1-235ENST00000641104 NBPF14Q5TI25 921 aa13.54□□□□□ -0.24
MACF1-235ENST00000641104 MAPKBP1O60336 1514 aa13.54□□□□□ -0.24
MACF1-235ENST00000641104 UBXN1Q04323 297 aa13.53□□□□□ -0.24
MACF1-235ENST00000641104 RBM26Q5T8P6 1007 aaKnown RBP13.53□□□□□ -0.24
MACF1-235ENST00000641104 C6orf163Q5TEZ5 329 aa13.53□□□□□ -0.24
MACF1-235ENST00000641104 PPM1EQ8WY54 764 aa13.53□□□□□ -0.24
MACF1-235ENST00000641104 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
MACF1-235ENST00000641104 GNPATO15228 680 aa13.53□□□□□ -0.24
MACF1-235ENST00000641104 METTL22Q9BUU2 404 aaPredicted RBP13.53□□□□□ -0.24
MACF1-235ENST00000641104 IQCGQ9H095 443 aaKnown RBP13.53□□□□□ -0.24
MACF1-235ENST00000641104 ZNF790Q6PG37 636 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms