RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 SH3TC2Q8TF17 1288 aa17.62■□□□□ 0.41
HLA-C-210ENST00000640219 CDC5LQ99459 802 aaKnown RBP17.62■□□□□ 0.41
HLA-C-210ENST00000640219 MBIPQ9NS73 344 aa17.62■□□□□ 0.41
HLA-C-210ENST00000640219 HOXB7P09629 217 aa17.61■□□□□ 0.41
HLA-C-210ENST00000640219 TXNRD3Q86VQ6 643 aa17.61■□□□□ 0.41
HLA-C-210ENST00000640219 ANKRD13AQ8IZ07 590 aa17.61■□□□□ 0.41
HLA-C-210ENST00000640219 CCDC191Q8NCU4 936 aa17.61■□□□□ 0.41
HLA-C-210ENST00000640219 MYD88Q99836 296 aa17.61■□□□□ 0.41
HLA-C-210ENST00000640219 ZFYVE28Q9HCC9 887 aa17.61■□□□□ 0.41
HLA-C-210ENST00000640219 BSDC1Q9NW68 430 aaPredicted RBP17.61■□□□□ 0.41
HLA-C-210ENST00000640219 USP2O75604 605 aaPredicted RBP17.6■□□□□ 0.41
HLA-C-210ENST00000640219 GTF2IP78347 998 aa17.6■□□□□ 0.41
HLA-C-210ENST00000640219 GOLGA2Q08379 1002 aa17.6■□□□□ 0.41
HLA-C-210ENST00000640219 TAF1CQ15572 869 aaPredicted RBP17.6■□□□□ 0.41
HLA-C-210ENST00000640219 NBPF12Q5TAG4 269 aaPredicted RBP17.6■□□□□ 0.41
HLA-C-210ENST00000640219 A0A0C4DFX4 3053 aa17.6■□□□□ 0.41
HLA-C-210ENST00000640219 RANBP2P49792 3224 aaKnown RBP17.59■□□□□ 0.41
HLA-C-210ENST00000640219 ZNF804BA4D1E1 1349 aa17.59■□□□□ 0.41
HLA-C-210ENST00000640219 ELL2O00472 640 aaPredicted RBP17.59■□□□□ 0.41
HLA-C-210ENST00000640219 OPTNQ96CV9 577 aa17.59■□□□□ 0.41
HLA-C-210ENST00000640219 MS4A4AQ96JQ5 239 aa17.59■□□□□ 0.41
HLA-C-210ENST00000640219 PRO3102Q9H379 93 aa17.59■□□□□ 0.41
HLA-C-210ENST00000640219 CLRN2A0PK11 232 aa17.58■□□□□ 0.4
HLA-C-210ENST00000640219 MYO1BO43795 1136 aa17.58■□□□□ 0.4
HLA-C-210ENST00000640219 MNX1P50219 401 aaPredicted RBP17.58■□□□□ 0.4
HLA-C-210ENST00000640219 MTMR14Q8NCE2 650 aa17.58■□□□□ 0.4
HLA-C-210ENST00000640219 TSR2Q969E8 191 aaKnown RBP17.58■□□□□ 0.4
HLA-C-210ENST00000640219 ELP3Q9H9T3 547 aa17.58■□□□□ 0.4
HLA-C-210ENST00000640219 CWC25Q9NXE8 425 aaPredicted RBP17.58■□□□□ 0.4
HLA-C-210ENST00000640219 LEMD3Q9Y2U8 911 aa17.58■□□□□ 0.4
HLA-C-210ENST00000640219 ZNF853P0CG23 659 aa17.57■□□□□ 0.4
HLA-C-210ENST00000640219 CTSWP56202 376 aa17.57■□□□□ 0.4
HLA-C-210ENST00000640219 KIF22Q14807 665 aa17.57■□□□□ 0.4
HLA-C-210ENST00000640219 BRI3BPQ8WY22 251 aa17.57■□□□□ 0.4
HLA-C-210ENST00000640219 SHISA4Q96DD7 197 aa17.57■□□□□ 0.4
HLA-C-210ENST00000640219 VEZTQ9HBM0 779 aa17.57■□□□□ 0.4
HLA-C-210ENST00000640219 PCDHAC2Q9Y5I4 1007 aa17.57■□□□□ 0.4
HLA-C-210ENST00000640219 COL6A3P12111 3177 aa17.56■□□□□ 0.4
HLA-C-210ENST00000640219 HTATIP2Q9BUP3 242 aa17.56■□□□□ 0.4
HLA-C-210ENST00000640219 PHAXQ9H814 394 aaKnown RBP17.56■□□□□ 0.4
HLA-C-210ENST00000640219 CCL15-CCL14A0A0B4J2E2 113 aa17.55■□□□□ 0.4
HLA-C-210ENST00000640219 KLRK1P26718 216 aa17.55■□□□□ 0.4
HLA-C-210ENST00000640219 GTF2A2P52657 109 aa17.55■□□□□ 0.4
HLA-C-210ENST00000640219 CCL15Q16663 113 aa17.55■□□□□ 0.4
HLA-C-210ENST00000640219 DUSP27Q5VZP5 1158 aa17.55■□□□□ 0.4
HLA-C-210ENST00000640219 TTLL11Q8NHH1 800 aa17.55■□□□□ 0.4
HLA-C-210ENST00000640219 ARHGAP39Q9C0H5 1083 aa17.55■□□□□ 0.4
HLA-C-210ENST00000640219 GREM2Q9H772 168 aa17.55■□□□□ 0.4
HLA-C-210ENST00000640219 SUPT16HQ9Y5B9 1047 aaKnown RBP17.55■□□□□ 0.4
HLA-C-210ENST00000640219 NR2E3Q9Y5X4 410 aa17.55■□□□□ 0.4
HLA-C-210ENST00000640219 CUL9Q8IWT3 2517 aa17.54■□□□□ 0.4
HLA-C-210ENST00000640219 SPDYE2BA6NHP3 402 aa17.54■□□□□ 0.4
HLA-C-210ENST00000640219 WDHD1O75717 1129 aaPredicted RBP17.54■□□□□ 0.4
HLA-C-210ENST00000640219 SPDYE6P0CI01 402 aa17.54■□□□□ 0.4
HLA-C-210ENST00000640219 LACTBP83111 547 aaPredicted RBP17.54■□□□□ 0.4
HLA-C-210ENST00000640219 RASA3Q14644 834 aa17.54■□□□□ 0.4
HLA-C-210ENST00000640219 MTFR1Q15390 333 aa17.54■□□□□ 0.4
HLA-C-210ENST00000640219 CFAP100Q494V2 611 aa17.54■□□□□ 0.4
HLA-C-210ENST00000640219 FAM43AQ8N2R8 423 aa17.54■□□□□ 0.4
HLA-C-210ENST00000640219 CERS5Q8N5B7 392 aa17.54■□□□□ 0.4
HLA-C-210ENST00000640219 C8orf58Q8NAV2 365 aa17.54■□□□□ 0.4
HLA-C-210ENST00000640219 CNKSR2Q8WXI2 1034 aa17.54■□□□□ 0.4
HLA-C-210ENST00000640219 PRMT6Q96LA8 375 aaPredicted RBP17.54■□□□□ 0.4
HLA-C-210ENST00000640219 IFT57Q9NWB7 429 aa17.54■□□□□ 0.4
HLA-C-210ENST00000640219 F8W031 263 aaPredicted RBP17.53■□□□□ 0.4
HLA-C-210ENST00000640219 SOX1O00570 391 aaPredicted RBP17.53■□□□□ 0.4
HLA-C-210ENST00000640219 GNRH1P01148 92 aa17.53■□□□□ 0.4
HLA-C-210ENST00000640219 NEFLP07196 543 aa17.53■□□□□ 0.4
HLA-C-210ENST00000640219 PRMT2P55345 433 aa17.53■□□□□ 0.4
HLA-C-210ENST00000640219 WWC1Q8IX03 1113 aa17.53■□□□□ 0.4
HLA-C-210ENST00000640219 TSPYL6Q8N831 410 aa17.53■□□□□ 0.4
HLA-C-210ENST00000640219 NKX2-3Q8TAU0 364 aa17.53■□□□□ 0.4
HLA-C-210ENST00000640219 CD209Q9NNX6 404 aa17.53■□□□□ 0.4
HLA-C-210ENST00000640219 SPEF2Q9C093 1822 aa17.52■□□□□ 0.4
HLA-C-210ENST00000640219 A0A1W2PPC1 479 aa17.52■□□□□ 0.4
HLA-C-210ENST00000640219 TLR2O60603 784 aa17.52■□□□□ 0.4
HLA-C-210ENST00000640219 IGHMBP2P38935 993 aaKnown RBP17.52■□□□□ 0.4
HLA-C-210ENST00000640219 UBE2Q1Q7Z7E8 422 aa17.52■□□□□ 0.4
HLA-C-210ENST00000640219 LRCH3Q96II8 777 aa17.52■□□□□ 0.4
HLA-C-210ENST00000640219 METTL22Q9BUU2 404 aaPredicted RBP17.52■□□□□ 0.4
HLA-C-210ENST00000640219 ANKRD2Q9GZV1 360 aa17.52■□□□□ 0.4
HLA-C-210ENST00000640219 ECM29Q5VYK3 1845 aa17.51■□□□□ 0.39
HLA-C-210ENST00000640219 AOX1Q06278 1338 aa17.51■□□□□ 0.39
HLA-C-210ENST00000640219 ZBTB7BO15156 539 aaPredicted RBP17.51■□□□□ 0.39
HLA-C-210ENST00000640219 KCNJ4P48050 445 aa17.51■□□□□ 0.39
HLA-C-210ENST00000640219 GNAI1P63096 354 aa17.51■□□□□ 0.39
HLA-C-210ENST00000640219 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.51■□□□□ 0.39
HLA-C-210ENST00000640219 SPINK5Q9NQ38 1064 aaPredicted RBP17.51■□□□□ 0.39
HLA-C-210ENST00000640219 GJA8P48165 433 aa17.5■□□□□ 0.39
HLA-C-210ENST00000640219 RBM5P52756 815 aaKnown RBP eCLIP17.5■□□□□ 0.39
HLA-C-210ENST00000640219 OTOFQ9HC10 1997 aa17.49■□□□□ 0.39
HLA-C-210ENST00000640219 ZSWIM8A7E2V4 1837 aa17.49■□□□□ 0.39
HLA-C-210ENST00000640219 ECM2O94769 699 aaPredicted RBP17.49■□□□□ 0.39
HLA-C-210ENST00000640219 GJB1P08034 283 aa17.49■□□□□ 0.39
HLA-C-210ENST00000640219 TNFAIP1Q13829 316 aa17.49■□□□□ 0.39
HLA-C-210ENST00000640219 VGLL4Q14135 290 aa17.49■□□□□ 0.39
HLA-C-210ENST00000640219 DDX58O95786 925 aaKnown RBP17.48■□□□□ 0.39
HLA-C-210ENST00000640219 CCL5P13501 91 aa17.48■□□□□ 0.39
HLA-C-210ENST00000640219 GRK4P32298 578 aa17.48■□□□□ 0.39
HLA-C-210ENST00000640219 MAP3K9P80192 1104 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms