RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 SETD5Q9C0A6 1442 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 A0A087WUV0 522 aaPredicted RBP7.01□□□□□ -1.29
NECAP1-222ENST00000640072 SPTLC2O15270 562 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 FIBPO43427 364 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 ZNF189O75820 626 aaPredicted RBP7.01□□□□□ -1.29
NECAP1-222ENST00000640072 ATG7O95352 703 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 PPP2R5CQ13362 524 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 DCTN1Q14203 1278 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 NAA25Q14CX7 972 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 TADA2BQ86TJ2 420 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 WDR66Q8TBY9 1149 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 NELL1Q92832 810 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 ERO1AQ96HE7 468 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 CDK5RAP3Q96JB5 506 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 MAK16Q9BXY0 300 aaKnown RBP7.01□□□□□ -1.29
NECAP1-222ENST00000640072 PHACTR1Q9C0D0 580 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 ACBD3Q9H3P7 528 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 AASDHPPTQ9NRN7 309 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 MKL2Q9ULH7 1088 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 SETD1BQ9UPS6 1966 aaKnown RBP7.01□□□□□ -1.29
NECAP1-222ENST00000640072 PYGLP06737 847 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 GCFC2P16383 781 aaKnown RBP7.01□□□□□ -1.29
NECAP1-222ENST00000640072 PACS1Q6VY07 963 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 ARHGAP27Q6ZUM4 889 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 RUFY1Q96T51 708 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 TCHPQ9BT92 498 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 CHST12Q9NRB3 414 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 ZNF215Q9UL58 517 aaPredicted RBP7.01□□□□□ -1.29
NECAP1-222ENST00000640072 TTF2Q9UNY4 1162 aaKnown RBP7.01□□□□□ -1.29
NECAP1-222ENST00000640072 TRAK1Q9UPV9 953 aa7.01□□□□□ -1.29
NECAP1-222ENST00000640072 MYL1P05976 194 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 HSPA1AP0DMV8 641 aaKnown RBP7□□□□□ -1.29
NECAP1-222ENST00000640072 HSPA1BP0DMV9 641 aaKnown RBP7□□□□□ -1.29
NECAP1-222ENST00000640072 EIF4A2Q14240 407 aaKnown RBP7□□□□□ -1.29
NECAP1-222ENST00000640072 UNC5DQ6UXZ4 953 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 NLRP13Q86W25 1043 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 HOXC10Q9NYD6 342 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 MYO6Q9UM54 1294 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 A0A1W2PRQ8 180 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 RPSAP08865 295 aaKnown RBP7□□□□□ -1.29
NECAP1-222ENST00000640072 HOXA10P31260 410 aaPredicted RBP7□□□□□ -1.29
NECAP1-222ENST00000640072 RANBP1P43487 201 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 ADCY1Q08828 1119 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 MPP3Q13368 585 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 WDR43Q15061 677 aaKnown RBP eCLIP7□□□□□ -1.29
NECAP1-222ENST00000640072 MAPRE1Q15691 268 aaKnown RBP7□□□□□ -1.29
NECAP1-222ENST00000640072 TSGA10IPQ3SY00 556 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 KBTBD12Q3ZCT8 623 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 CEP135Q66GS9 1140 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 RASGRP2Q7LDG7 609 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 ATP11CQ8NB49 1132 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 GPT2Q8TD30 523 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 NUP133Q8WUM0 1156 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 GIMAP1Q8WWP7 306 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 ATG3Q9NT62 314 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 LMCD1Q9NZU5 365 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 PYCARDQ9ULZ3 195 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 PRELID1Q9Y255 219 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 ATP6V0A2Q9Y487 856 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 CCDC7Q96M83 1385 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 ZSCAN9O15535 394 aaPredicted RBP7□□□□□ -1.29
NECAP1-222ENST00000640072 SLU7O95391 586 aaKnown RBP7□□□□□ -1.29
NECAP1-222ENST00000640072 COX10Q12887 443 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 GRM1Q13255 1194 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 SEPT7Q16181 437 aaKnown RBP7□□□□□ -1.29
NECAP1-222ENST00000640072 RABL6Q3YEC7 729 aaPredicted RBP7□□□□□ -1.29
NECAP1-222ENST00000640072 RRP12Q5JTH9 1297 aaKnown RBP7□□□□□ -1.29
NECAP1-222ENST00000640072 CWC27Q6UX04 472 aaKnown RBP7□□□□□ -1.29
NECAP1-222ENST00000640072 ZNF713Q8N859 430 aaPredicted RBP7□□□□□ -1.29
NECAP1-222ENST00000640072 CTNNBL1Q8WYA6 563 aaPredicted RBP7□□□□□ -1.29
NECAP1-222ENST00000640072 GNL3Q9BVP2 549 aaKnown RBP eCLIP7□□□□□ -1.29
NECAP1-222ENST00000640072 TNMDQ9H2S6 317 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 KIAA1468Q9P260 1216 aa7□□□□□ -1.29
NECAP1-222ENST00000640072 BRD4O60885 1362 aaPredicted RBP6.99□□□□□ -1.29
NECAP1-222ENST00000640072 NPC1L1Q9UHC9 1359 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 TSPY2A6NKD2 308 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 EIF3FO00303 357 aaPredicted RBP6.99□□□□□ -1.29
NECAP1-222ENST00000640072 SGTAO43765 313 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 RPN1P04843 607 aaKnown RBP6.99□□□□□ -1.29
NECAP1-222ENST00000640072 TSPY3P0CV98 308 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 TSPY8P0CW00 308 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 PNMA6AP0CW24 399 aaPredicted RBP6.99□□□□□ -1.29
NECAP1-222ENST00000640072 HARSP12081 509 aaKnown RBP6.99□□□□□ -1.29
NECAP1-222ENST00000640072 HOXD10P28358 340 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 CLCN2P51788 898 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 PIP4K2BP78356 416 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 TSPY1Q01534 308 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 POLA2Q14181 598 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 ARL6IP6Q8N6S5 226 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 FAXDC2Q96IV6 333 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 PAWRQ96IZ0 340 aaKnown RBP6.99□□□□□ -1.29
NECAP1-222ENST00000640072 CCDC68Q9H2F9 335 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 KCTD5Q9NXV2 234 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 FHAD1B1AJZ9 1412 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 LAMC3Q9Y6N6 1575 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 CFTRP13569 1480 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 FRMD3A2A2Y4 597 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 hCG_1984214I3L0E3 225 aa6.99□□□□□ -1.29
NECAP1-222ENST00000640072 TBCAO75347 108 aaKnown RBP6.99□□□□□ -1.29
NECAP1-222ENST00000640072 MTRF1O75570 445 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms