RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 ATP1A3P13637 1013 aa8.97□□□□□ -0.97
NECAP1-221ENST00000639955 PDIA3P30101 505 aaKnown RBP8.97□□□□□ -0.97
NECAP1-221ENST00000639955 TRDNQ13061 729 aa8.97□□□□□ -0.97
NECAP1-221ENST00000639955 ELF2Q15723 593 aa8.97□□□□□ -0.97
NECAP1-221ENST00000639955 STX1AQ16623 288 aa8.97□□□□□ -0.97
NECAP1-221ENST00000639955 KLHL10Q6JEL2 608 aa8.97□□□□□ -0.97
NECAP1-221ENST00000639955 COPRSQ9NQ92 184 aa8.97□□□□□ -0.97
NECAP1-221ENST00000639955 MED23Q9ULK4 1368 aa8.97□□□□□ -0.97
NECAP1-221ENST00000639955 CFAP100Q494V2 611 aa8.97□□□□□ -0.97
NECAP1-221ENST00000639955 SLC9C2Q5TAH2 1124 aa8.97□□□□□ -0.97
NECAP1-221ENST00000639955 LDHAL6AQ6ZMR3 332 aa8.97□□□□□ -0.97
NECAP1-221ENST00000639955 XAGE2Q96GT9 111 aa8.97□□□□□ -0.97
NECAP1-221ENST00000639955 ZNF396Q96N95 335 aaPredicted RBP8.97□□□□□ -0.97
NECAP1-221ENST00000639955 HAUS7Q99871 368 aa8.97□□□□□ -0.97
NECAP1-221ENST00000639955 JAG2Q9Y219 1238 aa8.97□□□□□ -0.97
NECAP1-221ENST00000639955 NWD1Q149M9 1564 aa8.96□□□□□ -0.97
NECAP1-221ENST00000639955 RFX5P48382 616 aaPredicted RBP8.96□□□□□ -0.97
NECAP1-221ENST00000639955 IMMTQ16891 758 aaKnown RBP8.96□□□□□ -0.97
NECAP1-221ENST00000639955 SYT10Q6XYQ8 523 aa8.96□□□□□ -0.97
NECAP1-221ENST00000639955 MIGA1Q8NAN2 632 aa8.96□□□□□ -0.97
NECAP1-221ENST00000639955 XPO4Q9C0E2 1151 aaKnown RBP8.96□□□□□ -0.97
NECAP1-221ENST00000639955 ST7Q9NRC1 585 aa8.96□□□□□ -0.97
NECAP1-221ENST00000639955 RGPD1P0DJD0 1748 aa8.96□□□□□ -0.98
NECAP1-221ENST00000639955 ZNF213O14771 459 aa8.96□□□□□ -0.98
NECAP1-221ENST00000639955 RNF113AO15541 343 aaKnown RBP8.96□□□□□ -0.98
NECAP1-221ENST00000639955 FGAP02671 866 aa8.96□□□□□ -0.98
NECAP1-221ENST00000639955 DNAJC10Q8IXB1 793 aa8.96□□□□□ -0.98
NECAP1-221ENST00000639955 TRMT44Q8IYL2 757 aaKnown RBP8.96□□□□□ -0.98
NECAP1-221ENST00000639955 NKX2-3Q8TAU0 364 aa8.96□□□□□ -0.98
NECAP1-221ENST00000639955 CPLX3Q8WVH0 158 aa8.96□□□□□ -0.98
NECAP1-221ENST00000639955 MRPS27Q92552 414 aaKnown RBP8.96□□□□□ -0.98
NECAP1-221ENST00000639955 EYA2O00167 538 aa8.96□□□□□ -0.98
NECAP1-221ENST00000639955 SLC3A2P08195 630 aaKnown RBP8.96□□□□□ -0.98
NECAP1-221ENST00000639955 EPC1Q9H2F5 836 aa8.96□□□□□ -0.98
NECAP1-221ENST00000639955 KIF28PB7ZC32 967 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 GPAA1O43292 621 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 CTDSPL2Q05D32 466 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 PNOCQ13519 176 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 TEX2Q8IWB9 1127 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 STAMQ92783 540 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 SLC26A6Q9BXS9 759 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 ANO10Q9NW15 660 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 ABCF2Q9UG63 623 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 USP42Q9H9J4 1324 aaKnown RBP8.95□□□□□ -0.98
NECAP1-221ENST00000639955 MINDY4BA8MYZ0 360 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 DMTNQ08495 405 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 NCBP1Q09161 790 aaKnown RBP8.95□□□□□ -0.98
NECAP1-221ENST00000639955 IFIT5Q13325 482 aaKnown RBP8.95□□□□□ -0.98
NECAP1-221ENST00000639955 ATG9AQ7Z3C6 839 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 GPIHBP1Q8IV16 184 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 GRAMD1CQ8IYS0 662 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 PLBD2Q8NHP8 589 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 ASAP1Q9ULH1 1129 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 KCNJ14Q9UNX9 436 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 LTN1O94822 1766 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 SPTLC2O15270 562 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 FAM160A1Q05DH4 1040 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 LRRC8AQ8IWT6 810 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 CCDC24Q8N4L8 307 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 LRRN4CLQ8ND94 238 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 DCAF5Q96JK2 942 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 ALG1Q9BT22 464 aa8.95□□□□□ -0.98
NECAP1-221ENST00000639955 CARMIL3Q8ND23 1372 aa8.94□□□□□ -0.98
NECAP1-221ENST00000639955 PES1O00541 588 aaKnown RBP8.94□□□□□ -0.98
NECAP1-221ENST00000639955 FOXN1O15353 648 aa8.94□□□□□ -0.98
NECAP1-221ENST00000639955 PFKFB2O60825 505 aa8.94□□□□□ -0.98
NECAP1-221ENST00000639955 ZNF526Q8TF50 670 aaPredicted RBP8.94□□□□□ -0.98
NECAP1-221ENST00000639955 ZSCAN16Q9H4T2 348 aaPredicted RBP8.94□□□□□ -0.98
NECAP1-221ENST00000639955 PXDNLA1KZ92 1463 aa8.94□□□□□ -0.98
NECAP1-221ENST00000639955 FDPSP14324 419 aaKnown RBP8.94□□□□□ -0.98
NECAP1-221ENST00000639955 SFPQP23246 707 aaKnown RBP eCLIP8.94□□□□□ -0.98
NECAP1-221ENST00000639955 STX17P56962 302 aa8.94□□□□□ -0.98
NECAP1-221ENST00000639955 SMIM5Q71RC9 77 aa8.94□□□□□ -0.98
NECAP1-221ENST00000639955 DNAI1Q9UI46 699 aa8.94□□□□□ -0.98
NECAP1-221ENST00000639955 KDM6AO15550 1401 aaPredicted RBP8.94□□□□□ -0.98
NECAP1-221ENST00000639955 URI1O94763 535 aaPredicted RBP8.93□□□□□ -0.98
NECAP1-221ENST00000639955 IL15P40933 162 aaPredicted RBP8.93□□□□□ -0.98
NECAP1-221ENST00000639955 FOXO4P98177 505 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 TDRD7Q8NHU6 1098 aaKnown RBP8.93□□□□□ -0.98
NECAP1-221ENST00000639955 ZCRB1Q8TBF4 217 aaKnown RBP8.93□□□□□ -0.98
NECAP1-221ENST00000639955 GREM2Q9H772 168 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 TRMT112Q9UI30 125 aaKnown RBP8.93□□□□□ -0.98
NECAP1-221ENST00000639955 MEGF6O75095 1541 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 PRDM1O75626 825 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 CASP1P29466 404 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 METAP2P50579 478 aaKnown RBP eCLIP8.93□□□□□ -0.98
NECAP1-221ENST00000639955 TERF1P54274 439 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 KCNQ4P56696 695 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 TRIM29Q14134 588 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 ERCC6LQ2NKX8 1250 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 BICDL1Q6ZP65 573 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 ILDR1Q86SU0 546 aaPredicted RBP8.93□□□□□ -0.98
NECAP1-221ENST00000639955 SPTLC3Q9NUV7 552 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 SMIM22K7EJ46 135 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 POLR3GO15318 223 aaPredicted RBP8.93□□□□□ -0.98
NECAP1-221ENST00000639955 ZNF202O95125 648 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 TPM3P06753 285 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 HLFQ16534 295 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 AIDAQ96BJ3 306 aa8.93□□□□□ -0.98
NECAP1-221ENST00000639955 ELP1O95163 1332 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms