RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 SPHKAPQ2M3C7 1700 aa9.4□□□□□ -0.9
NECAP1-220ENST00000639841 MST1RQ04912 1400 aa9.4□□□□□ -0.9
NECAP1-220ENST00000639841 EXOC5O00471 708 aa9.4□□□□□ -0.9
NECAP1-220ENST00000639841 KCNQ2O43526 872 aa9.4□□□□□ -0.9
NECAP1-220ENST00000639841 SLC4A3P48751 1232 aa9.4□□□□□ -0.9
NECAP1-220ENST00000639841 OS9Q13438 667 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-220ENST00000639841 TAF1CQ15572 869 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-220ENST00000639841 TTC39BQ5VTQ0 682 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-220ENST00000639841 BLOC1S3Q6QNY0 202 aa9.4□□□□□ -0.9
NECAP1-220ENST00000639841 AMOTL1Q8IY63 956 aa9.4□□□□□ -0.9
NECAP1-220ENST00000639841 SAMD3Q8N6K7 520 aa9.4□□□□□ -0.9
NECAP1-220ENST00000639841 COLQQ9Y215 455 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-220ENST00000639841 EFR3BQ9Y2G0 817 aa9.4□□□□□ -0.9
NECAP1-220ENST00000639841 CAND2O75155 1236 aa9.39□□□□□ -0.91
NECAP1-220ENST00000639841 ARHGAP9Q9BRR9 750 aa9.39□□□□□ -0.91
NECAP1-220ENST00000639841 EIF1AYO14602 144 aaKnown RBP9.39□□□□□ -0.91
NECAP1-220ENST00000639841 PLIN1O60240 522 aa9.39□□□□□ -0.91
NECAP1-220ENST00000639841 VPS72Q15906 364 aa9.39□□□□□ -0.91
NECAP1-220ENST00000639841 GINM1Q9NU53 330 aa9.39□□□□□ -0.91
NECAP1-220ENST00000639841 KBTBD4Q9NVX7 518 aa9.39□□□□□ -0.91
NECAP1-220ENST00000639841 MAP3K20Q9NYL2 800 aaKnown RBP9.39□□□□□ -0.91
NECAP1-220ENST00000639841 AFF2P51816 1311 aa9.39□□□□□ -0.91
NECAP1-220ENST00000639841 NRXN3Q9Y4C0 1643 aa9.38□□□□□ -0.91
NECAP1-220ENST00000639841 TMEM229AB2RXF0 380 aa9.38□□□□□ -0.91
NECAP1-220ENST00000639841 ALDH1L1O75891 902 aa9.38□□□□□ -0.91
NECAP1-220ENST00000639841 LMOD3Q0VAK6 560 aa9.38□□□□□ -0.91
NECAP1-220ENST00000639841 USP4Q13107 963 aa9.38□□□□□ -0.91
NECAP1-220ENST00000639841 Q3C1V9 767 aa9.38□□□□□ -0.91
NECAP1-220ENST00000639841 SLC39A7Q92504 469 aa9.38□□□□□ -0.91
NECAP1-220ENST00000639841 TRIM52Q96A61 297 aa9.38□□□□□ -0.91
NECAP1-220ENST00000639841 SPON2Q9BUD6 331 aa9.38□□□□□ -0.91
NECAP1-220ENST00000639841 LRFN2Q9ULH4 789 aa9.38□□□□□ -0.91
NECAP1-220ENST00000639841 COL22A1Q8NFW1 1626 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-220ENST00000639841 PNPLA6Q8IY17 1366 aa9.37□□□□□ -0.91
NECAP1-220ENST00000639841 A0A1W2PRU2 124 aa9.37□□□□□ -0.91
NECAP1-220ENST00000639841 USP5P45974 858 aa9.37□□□□□ -0.91
NECAP1-220ENST00000639841 TTF1Q15361 905 aaPredicted RBP9.37□□□□□ -0.91
NECAP1-220ENST00000639841 PI16Q6UXB8 463 aa9.37□□□□□ -0.91
NECAP1-220ENST00000639841 DZIP3Q86Y13 1208 aaKnown RBP9.37□□□□□ -0.91
NECAP1-220ENST00000639841 TNS4Q8IZW8 715 aa9.37□□□□□ -0.91
NECAP1-220ENST00000639841 CELF2-AS1Q8N7Q2 184 aa9.37□□□□□ -0.91
NECAP1-220ENST00000639841 USB1Q9BQ65 265 aaKnown RBP9.37□□□□□ -0.91
NECAP1-220ENST00000639841 SWAP70Q9UH65 585 aa9.37□□□□□ -0.91
NECAP1-220ENST00000639841 ADAMTS1Q9UHI8 967 aa9.37□□□□□ -0.91
NECAP1-220ENST00000639841 CCER2I3L3R5 266 aa9.37□□□□□ -0.91
NECAP1-220ENST00000639841 BPNT1O95861 308 aa9.37□□□□□ -0.91
NECAP1-220ENST00000639841 ST13P50502 369 aaKnown RBP9.37□□□□□ -0.91
NECAP1-220ENST00000639841 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.37□□□□□ -0.91
NECAP1-220ENST00000639841 DALRD3Q5D0E6 543 aaKnown RBP9.37□□□□□ -0.91
NECAP1-220ENST00000639841 ASTLQ6HA08 431 aaPredicted RBP9.37□□□□□ -0.91
NECAP1-220ENST00000639841 TSPAN10Q9H1Z9 355 aaPredicted RBP9.37□□□□□ -0.91
NECAP1-220ENST00000639841 ENAMQ9NRM1 1142 aa9.37□□□□□ -0.91
NECAP1-220ENST00000639841 RGS12O14924 1447 aa9.36□□□□□ -0.91
NECAP1-220ENST00000639841 KIF1BO60333 1816 aa9.36□□□□□ -0.91
NECAP1-220ENST00000639841 CFAP69A5D8W1 941 aa9.36□□□□□ -0.91
NECAP1-220ENST00000639841 PTPREP23469 700 aa9.36□□□□□ -0.91
NECAP1-220ENST00000639841 HDAC1Q13547 482 aaPredicted RBP9.36□□□□□ -0.91
NECAP1-220ENST00000639841 CCDC113Q9H0I3 377 aa9.36□□□□□ -0.91
NECAP1-220ENST00000639841 HFM1A2PYH4 1435 aa9.36□□□□□ -0.91
NECAP1-220ENST00000639841 KRT18P05783 430 aaKnown RBP9.35□□□□□ -0.91
NECAP1-220ENST00000639841 CD53P19397 219 aa9.35□□□□□ -0.91
NECAP1-220ENST00000639841 EPHA4P54764 986 aa9.35□□□□□ -0.91
NECAP1-220ENST00000639841 SH3BP5LQ7L8J4 393 aa9.35□□□□□ -0.91
NECAP1-220ENST00000639841 ZBTB33Q86T24 672 aa9.35□□□□□ -0.91
NECAP1-220ENST00000639841 KIAA0825Q8IV33 1275 aa9.35□□□□□ -0.91
NECAP1-220ENST00000639841 PRKAG3Q9UGI9 489 aa9.35□□□□□ -0.91
NECAP1-220ENST00000639841 NRBP1Q9UHY1 535 aa9.35□□□□□ -0.91
NECAP1-220ENST00000639841 TRPC5Q9UL62 973 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-220ENST00000639841 NALCNQ8IZF0 1738 aa9.35□□□□□ -0.91
NECAP1-220ENST00000639841 PTPRUQ92729 1446 aa9.35□□□□□ -0.91
NECAP1-220ENST00000639841 NUP155O75694 1391 aa9.35□□□□□ -0.91
NECAP1-220ENST00000639841 ZEB1P37275 1124 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-220ENST00000639841 SOX9P48436 509 aa9.35□□□□□ -0.91
NECAP1-220ENST00000639841 PPP2R5AQ15172 486 aa9.35□□□□□ -0.91
NECAP1-220ENST00000639841 NBPF14Q5TI25 921 aa9.35□□□□□ -0.91
NECAP1-220ENST00000639841 ARMC2Q8NEN0 867 aa9.35□□□□□ -0.91
NECAP1-220ENST00000639841 PKNOX2Q96KN3 472 aa9.35□□□□□ -0.91
NECAP1-220ENST00000639841 LRPPRCP42704 1394 aaKnown RBP9.34□□□□□ -0.91
NECAP1-220ENST00000639841 RPGRIP1LQ68CZ1 1315 aa9.34□□□□□ -0.91
NECAP1-220ENST00000639841 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.34□□□□□ -0.91
NECAP1-220ENST00000639841 SCGB1D2O95969 90 aa9.34□□□□□ -0.91
NECAP1-220ENST00000639841 JUNDP17535 347 aa9.34□□□□□ -0.91
NECAP1-220ENST00000639841 EPHB1P54762 984 aa9.34□□□□□ -0.91
NECAP1-220ENST00000639841 C3orf67Q6ZVT6 689 aa9.34□□□□□ -0.91
NECAP1-220ENST00000639841 PCGF5Q86SE9 256 aa9.34□□□□□ -0.91
NECAP1-220ENST00000639841 C14orf80Q86SX3 495 aa9.34□□□□□ -0.91
NECAP1-220ENST00000639841 TMX4Q9H1E5 349 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-220ENST00000639841 KIAA1468Q9P260 1216 aa9.34□□□□□ -0.91
NECAP1-220ENST00000639841 PCDHB11Q9Y5F2 797 aa9.34□□□□□ -0.91
NECAP1-220ENST00000639841 NEXMIFQ5QGS0 1516 aa9.34□□□□□ -0.91
NECAP1-220ENST00000639841 C1orf167Q5SNV9 1468 aa9.34□□□□□ -0.91
NECAP1-220ENST00000639841 WASLO00401 505 aaPredicted RBP9.33□□□□□ -0.92
NECAP1-220ENST00000639841 PDGFAP04085 211 aa9.33□□□□□ -0.92
NECAP1-220ENST00000639841 DNM1Q05193 864 aaKnown RBP9.33□□□□□ -0.92
NECAP1-220ENST00000639841 WDR78Q5VTH9 848 aa9.33□□□□□ -0.92
NECAP1-220ENST00000639841 DDX42Q86XP3 938 aaKnown RBP eCLIP9.33□□□□□ -0.92
NECAP1-220ENST00000639841 EAF1Q96JC9 268 aaPredicted RBP9.33□□□□□ -0.92
NECAP1-220ENST00000639841 CASS4Q9NQ75 786 aa9.33□□□□□ -0.92
NECAP1-220ENST00000639841 STRIP2Q9ULQ0 834 aa9.33□□□□□ -0.92
NECAP1-220ENST00000639841 CDC42BPGQ6DT37 1551 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms