RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 TLR7Q9NYK1 1049 aaKnown RBP10.29□□□□□ -0.76
CACNA1A-254ENST00000637952 MINDY4BA8MYZ0 360 aa10.28□□□□□ -0.76
CACNA1A-254ENST00000637952 POLR3DP05423 398 aaPredicted RBP10.28□□□□□ -0.76
CACNA1A-254ENST00000637952 CASP7P55210 303 aa10.28□□□□□ -0.76
CACNA1A-254ENST00000637952 EDC3Q96F86 508 aaKnown RBP10.28□□□□□ -0.76
CACNA1A-254ENST00000637952 SLC4A8Q2Y0W8 1093 aa10.28□□□□□ -0.76
CACNA1A-254ENST00000637952 RALYLQ86SE5 291 aaKnown RBP10.28□□□□□ -0.76
CACNA1A-254ENST00000637952 H7C1D1 291 aa10.28□□□□□ -0.76
CACNA1A-254ENST00000637952 GRIN3BO60391 1043 aa10.28□□□□□ -0.76
CACNA1A-254ENST00000637952 SDSP20132 328 aa10.28□□□□□ -0.76
CACNA1A-254ENST00000637952 TBC1D16Q8TBP0 767 aa10.28□□□□□ -0.76
CACNA1A-254ENST00000637952 TBC1D22AQ8WUA7 517 aa10.28□□□□□ -0.76
CACNA1A-254ENST00000637952 TTF2Q9UNY4 1162 aaKnown RBP10.28□□□□□ -0.76
CACNA1A-254ENST00000637952 SLC3A2P08195 630 aaKnown RBP10.27□□□□□ -0.76
CACNA1A-254ENST00000637952 GRIPAP1Q4V328 841 aa10.27□□□□□ -0.76
CACNA1A-254ENST00000637952 SYT17Q9BSW7 474 aa10.27□□□□□ -0.76
CACNA1A-254ENST00000637952 GPR108Q9NPR9 543 aa10.27□□□□□ -0.76
CACNA1A-254ENST00000637952 TTLL12Q14166 644 aaPredicted RBP10.27□□□□□ -0.77
CACNA1A-254ENST00000637952 TNIP1Q15025 636 aa10.27□□□□□ -0.77
CACNA1A-254ENST00000637952 NAPBQ9H115 298 aa10.27□□□□□ -0.77
CACNA1A-254ENST00000637952 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.27□□□□□ -0.77
CACNA1A-254ENST00000637952 PXDNLA1KZ92 1463 aa10.27□□□□□ -0.77
CACNA1A-254ENST00000637952 PICALMQ13492 652 aa10.27□□□□□ -0.77
CACNA1A-254ENST00000637952 BECN1Q14457 450 aa10.27□□□□□ -0.77
CACNA1A-254ENST00000637952 ATG9AQ7Z3C6 839 aa10.27□□□□□ -0.77
CACNA1A-254ENST00000637952 CRACR2BQ8N4Y2 399 aaPredicted RBP10.27□□□□□ -0.77
CACNA1A-254ENST00000637952 ZFYP08048 801 aaPredicted RBP10.26□□□□□ -0.77
CACNA1A-254ENST00000637952 ATP5JP18859 108 aa10.26□□□□□ -0.77
CACNA1A-254ENST00000637952 SCNN1DP51172 638 aa10.26□□□□□ -0.77
CACNA1A-254ENST00000637952 COA1Q9GZY4 146 aa10.26□□□□□ -0.77
CACNA1A-254ENST00000637952 MTMR7Q9Y216 660 aa10.26□□□□□ -0.77
CACNA1A-254ENST00000637952 MMP14P50281 582 aa10.26□□□□□ -0.77
CACNA1A-254ENST00000637952 ATP2B2Q01814 1243 aa10.26□□□□□ -0.77
CACNA1A-254ENST00000637952 EAPPQ56P03 285 aaPredicted RBP10.26□□□□□ -0.77
CACNA1A-254ENST00000637952 CIAPIN1Q6FI81 312 aa10.26□□□□□ -0.77
CACNA1A-254ENST00000637952 PI16Q6UXB8 463 aa10.26□□□□□ -0.77
CACNA1A-254ENST00000637952 CD209Q9NNX6 404 aa10.26□□□□□ -0.77
CACNA1A-254ENST00000637952 RFX5P48382 616 aaPredicted RBP10.26□□□□□ -0.77
CACNA1A-254ENST00000637952 BMP2KLQ5H9B9 411 aa10.26□□□□□ -0.77
CACNA1A-254ENST00000637952 DLGAP5Q15398 846 aa10.25□□□□□ -0.77
CACNA1A-254ENST00000637952 NLGN2Q8NFZ4 835 aa10.25□□□□□ -0.77
CACNA1A-254ENST00000637952 CRNKL1Q9BZJ0 848 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-254ENST00000637952 BTAF1O14981 1849 aa10.25□□□□□ -0.77
CACNA1A-254ENST00000637952 HOXA10P31260 410 aaPredicted RBP10.25□□□□□ -0.77
CACNA1A-254ENST00000637952 PODNQ7Z5L7 613 aa10.25□□□□□ -0.77
CACNA1A-254ENST00000637952 MAGEB6P1A0A0J9YX57 407 aa10.25□□□□□ -0.77
CACNA1A-254ENST00000637952 USP17L3A6NCW0 530 aa10.25□□□□□ -0.77
CACNA1A-254ENST00000637952 USP17L4A6NCW7 530 aa10.25□□□□□ -0.77
CACNA1A-254ENST00000637952 RNF113AO15541 343 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-254ENST00000637952 ECE2O60344 883 aa10.25□□□□□ -0.77
CACNA1A-254ENST00000637952 USP17L1Q7RTZ2 530 aa10.25□□□□□ -0.77
CACNA1A-254ENST00000637952 CNPY4Q8N129 248 aa10.25□□□□□ -0.77
CACNA1A-254ENST00000637952 CTNNA3Q9UI47 895 aa10.25□□□□□ -0.77
CACNA1A-254ENST00000637952 THSD7AQ9UPZ6 1657 aa10.24□□□□□ -0.77
CACNA1A-254ENST00000637952 ERICH2A1L162 156 aa10.24□□□□□ -0.77
CACNA1A-254ENST00000637952 IARSP41252 1262 aaKnown RBP10.24□□□□□ -0.77
CACNA1A-254ENST00000637952 FAM84BQ96KN1 310 aaPredicted RBP10.24□□□□□ -0.77
CACNA1A-254ENST00000637952 MKNK2Q9HBH9 465 aa10.24□□□□□ -0.77
CACNA1A-254ENST00000637952 SLC4A4Q9Y6R1 1079 aa10.24□□□□□ -0.77
CACNA1A-254ENST00000637952 MAST3O60307 1309 aa10.24□□□□□ -0.77
CACNA1A-254ENST00000637952 TEKT1Q969V4 418 aa10.24□□□□□ -0.77
CACNA1A-254ENST00000637952 AATFQ9NY61 560 aaKnown RBP eCLIP10.24□□□□□ -0.77
CACNA1A-254ENST00000637952 RASGRF1Q13972 1273 aa10.23□□□□□ -0.77
CACNA1A-254ENST00000637952 SYNE3Q6ZMZ3 975 aa10.23□□□□□ -0.77
CACNA1A-254ENST00000637952 NFXL1Q6ZNB6 911 aa10.23□□□□□ -0.77
CACNA1A-254ENST00000637952 KBTBD3Q8NAB2 608 aa10.23□□□□□ -0.77
CACNA1A-254ENST00000637952 HMG20BQ9P0W2 317 aa10.23□□□□□ -0.77
CACNA1A-254ENST00000637952 ITGB4P16144 1822 aa10.23□□□□□ -0.77
CACNA1A-254ENST00000637952 MCMDC2Q4G0Z9 681 aa10.23□□□□□ -0.77
CACNA1A-254ENST00000637952 TEX11Q8IYF3 940 aa10.23□□□□□ -0.77
CACNA1A-254ENST00000637952 POLLQ9UGP5 575 aa10.23□□□□□ -0.77
CACNA1A-254ENST00000637952 MPHOSPH10O00566 681 aaKnown RBP10.23□□□□□ -0.77
CACNA1A-254ENST00000637952 PLCG2P16885 1265 aa10.23□□□□□ -0.77
CACNA1A-254ENST00000637952 NMIQ13287 307 aaPredicted RBP10.23□□□□□ -0.77
CACNA1A-254ENST00000637952 IMMTQ16891 758 aaKnown RBP10.23□□□□□ -0.77
CACNA1A-254ENST00000637952 KDM2BQ8NHM5 1336 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 SEMA3EO15041 775 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 HLA-DOAP06340 250 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 RASSF7Q02833 373 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 HSCBQ8IWL3 235 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 C22orf23Q9BZE7 217 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 ANTXR1Q9H6X2 564 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 ZNRF3Q9ULT6 936 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 MBD4O95243 580 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 HAND2P61296 217 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 SPRYD3Q8NCJ5 442 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 CHMP4CQ96CF2 233 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 HAUS7Q99871 368 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 ZNF532Q9HCE3 1301 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 ZNF213O14771 459 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 TCP10Q12799 353 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 CRY2Q49AN0 593 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 RGS22Q8NE09 1264 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 ZNF408Q9H9D4 720 aa10.22□□□□□ -0.77
CACNA1A-254ENST00000637952 RRP9O43818 475 aaKnown RBP10.21□□□□□ -0.77
CACNA1A-254ENST00000637952 DHX16O60231 1041 aaKnown RBP10.21□□□□□ -0.77
CACNA1A-254ENST00000637952 MCM9Q9NXL9 1143 aa10.21□□□□□ -0.77
CACNA1A-254ENST00000637952 ST18O60284 1047 aa10.21□□□□□ -0.78
CACNA1A-254ENST00000637952 LMNB1P20700 586 aa10.21□□□□□ -0.78
CACNA1A-254ENST00000637952 MCAMP43121 646 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms