RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 FAM84BQ96KN1 310 aaPredicted RBP18.48■□□□□ 0.55
CLN6-219ENST00000637329 ANTXR1Q9H6X2 564 aa18.48■□□□□ 0.55
CLN6-219ENST00000637329 DENND2AQ9ULE3 1009 aa18.48■□□□□ 0.55
CLN6-219ENST00000637329 MCMDC2Q4G0Z9 681 aa18.47■□□□□ 0.55
CLN6-219ENST00000637329 TMED8Q6PL24 325 aaPredicted RBP18.47■□□□□ 0.55
CLN6-219ENST00000637329 C2CD5Q86YS7 1000 aa18.47■□□□□ 0.55
CLN6-219ENST00000637329 GGA1Q9UJY5 639 aa18.47■□□□□ 0.55
CLN6-219ENST00000637329 HIBADHP31937 336 aaKnown RBP18.46■□□□□ 0.55
CLN6-219ENST00000637329 GYG1P46976 350 aa18.46■□□□□ 0.55
CLN6-219ENST00000637329 GPSM2P81274 684 aa18.46■□□□□ 0.55
CLN6-219ENST00000637329 BECN1Q14457 450 aa18.46■□□□□ 0.55
CLN6-219ENST00000637329 RABEP1Q15276 862 aa18.46■□□□□ 0.55
CLN6-219ENST00000637329 ZNF804AQ7Z570 1209 aa18.46■□□□□ 0.55
CLN6-219ENST00000637329 APPBP2Q92624 585 aa18.46■□□□□ 0.55
CLN6-219ENST00000637329 KIF2CQ99661 725 aa18.46■□□□□ 0.55
CLN6-219ENST00000637329 UFL1O94874 794 aa18.45■□□□□ 0.54
CLN6-219ENST00000637329 HSPA4P34932 840 aa18.45■□□□□ 0.54
CLN6-219ENST00000637329 MAP3K12Q12852 859 aa18.45■□□□□ 0.54
CLN6-219ENST00000637329 UBE3CQ15386 1083 aa18.45■□□□□ 0.54
CLN6-219ENST00000637329 CNKSR1Q969H4 720 aa18.45■□□□□ 0.54
CLN6-219ENST00000637329 TMX4Q9H1E5 349 aaPredicted RBP18.45■□□□□ 0.54
CLN6-219ENST00000637329 KIAA1551Q9HCM1 1747 aa18.45■□□□□ 0.54
CLN6-219ENST00000637329 MAST3O60307 1309 aa18.45■□□□□ 0.54
CLN6-219ENST00000637329 CACNA1SQ13698 1873 aa18.44■□□□□ 0.54
CLN6-219ENST00000637329 ADD2P35612 726 aa18.44■□□□□ 0.54
CLN6-219ENST00000637329 APLP1P51693 650 aa18.44■□□□□ 0.54
CLN6-219ENST00000637329 ZNF589Q86UQ0 364 aaPredicted RBP18.44■□□□□ 0.54
CLN6-219ENST00000637329 NLGN2Q8NFZ4 835 aa18.44■□□□□ 0.54
CLN6-219ENST00000637329 PIH1D3Q9NQM4 214 aaKnown RBP18.44■□□□□ 0.54
CLN6-219ENST00000637329 KLRK1P26718 216 aa18.43■□□□□ 0.54
CLN6-219ENST00000637329 WASHC4Q2M389 1173 aa18.43■□□□□ 0.54
CLN6-219ENST00000637329 ZNF526Q8TF50 670 aaPredicted RBP18.43■□□□□ 0.54
CLN6-219ENST00000637329 MAP4K1Q92918 833 aa18.43■□□□□ 0.54
CLN6-219ENST00000637329 NSFL1CQ9UNZ2 370 aaKnown RBP18.43■□□□□ 0.54
CLN6-219ENST00000637329 IDH1O75874 414 aaKnown RBP18.42■□□□□ 0.54
CLN6-219ENST00000637329 PDE6AP16499 860 aa18.42■□□□□ 0.54
CLN6-219ENST00000637329 YBX3P16989 372 aaKnown RBP eCLIP18.42■□□□□ 0.541e-7■■□□□ 13.8
CLN6-219ENST00000637329 TBC1D16Q8TBP0 767 aa18.42■□□□□ 0.54
CLN6-219ENST00000637329 SNX21Q969T3 373 aa18.42■□□□□ 0.54
CLN6-219ENST00000637329 DSCC1Q9BVC3 393 aa18.42■□□□□ 0.54
CLN6-219ENST00000637329 SALL1Q9NSC2 1324 aa18.42■□□□□ 0.54
CLN6-219ENST00000637329 WTIPA6NIX2 430 aaPredicted RBP18.41■□□□□ 0.54
CLN6-219ENST00000637329 GRIPAP1Q4V328 841 aa18.41■□□□□ 0.54
CLN6-219ENST00000637329 SLC9C2Q5TAH2 1124 aa18.41■□□□□ 0.54
CLN6-219ENST00000637329 CC2D2BQ6DHV5 1058 aa18.41■□□□□ 0.54
CLN6-219ENST00000637329 PRPF40BQ6NWY9 871 aaKnown RBP18.41■□□□□ 0.54
CLN6-219ENST00000637329 ZGPATQ8N5A5 531 aaKnown RBP18.41■□□□□ 0.54
CLN6-219ENST00000637329 KCNB2Q92953 911 aa18.41■□□□□ 0.54
CLN6-219ENST00000637329 ZNF622Q969S3 477 aaKnown RBP eCLIP18.41■□□□□ 0.54
CLN6-219ENST00000637329 U3KPZ7 1027 aaPredicted RBP18.41■□□□□ 0.54
CLN6-219ENST00000637329 SNED1Q8TER0 1413 aa18.4■□□□□ 0.54
CLN6-219ENST00000637329 TCRBV5S4A2TA0A5A2 114 aa18.4■□□□□ 0.54
CLN6-219ENST00000637329 FRAT2O75474 233 aaPredicted RBP18.4■□□□□ 0.54
CLN6-219ENST00000637329 PTH1RQ03431 593 aa18.4■□□□□ 0.54
CLN6-219ENST00000637329 RNF20Q5VTR2 975 aa18.4■□□□□ 0.54
CLN6-219ENST00000637329 TDRD7Q8NHU6 1098 aaKnown RBP18.4■□□□□ 0.54
CLN6-219ENST00000637329 OSBP2Q969R2 916 aa18.4■□□□□ 0.54
CLN6-219ENST00000637329 RBM8AQ9Y5S9 174 aaKnown RBP18.4■□□□□ 0.54
CLN6-219ENST00000637329 MYO5AQ9Y4I1 1855 aaKnown RBP18.39■□□□□ 0.54
CLN6-219ENST00000637329 IL1R1P14778 569 aa18.39■□□□□ 0.53
CLN6-219ENST00000637329 NECTIN1Q15223 517 aa18.39■□□□□ 0.53
CLN6-219ENST00000637329 DPP8Q6V1X1 898 aaPredicted RBP18.39■□□□□ 0.53
CLN6-219ENST00000637329 TXNRD3Q86VQ6 643 aa18.39■□□□□ 0.53
CLN6-219ENST00000637329 MPNDQ8N594 471 aa18.39■□□□□ 0.53
CLN6-219ENST00000637329 WDR66Q8TBY9 1149 aa18.39■□□□□ 0.53
CLN6-219ENST00000637329 SEC62Q99442 399 aaKnown RBP18.39■□□□□ 0.53
CLN6-219ENST00000637329 LRP2BPQ9P2M1 347 aa18.39■□□□□ 0.53
CLN6-219ENST00000637329 DAXXQ9UER7 740 aaPredicted RBP18.39■□□□□ 0.53
CLN6-219ENST00000637329 POLLQ9UGP5 575 aa18.39■□□□□ 0.53
CLN6-219ENST00000637329 WWC3Q9ULE0 1092 aa18.39■□□□□ 0.53
CLN6-219ENST00000637329 ZNF532Q9HCE3 1301 aa18.39■□□□□ 0.53
CLN6-219ENST00000637329 SLX4Q8IY92 1834 aa18.39■□□□□ 0.53
CLN6-219ENST00000637329 M0R2C6 588 aa18.38■□□□□ 0.53
CLN6-219ENST00000637329 ZKSCAN1P17029 563 aaPredicted RBP18.38■□□□□ 0.53
CLN6-219ENST00000637329 SLC51AQ86UW1 340 aa18.38■□□□□ 0.53
CLN6-219ENST00000637329 HSCBQ8IWL3 235 aa18.38■□□□□ 0.53
CLN6-219ENST00000637329 EYA3Q99504 573 aa18.38■□□□□ 0.53
CLN6-219ENST00000637329 PALD1Q9ULE6 856 aa18.38■□□□□ 0.53
CLN6-219ENST00000637329 IQSEC3Q9UPP2 1182 aaPredicted RBP18.38■□□□□ 0.53
CLN6-219ENST00000637329 ST18O60284 1047 aa18.37■□□□□ 0.53
CLN6-219ENST00000637329 CHGBP05060 677 aa18.37■□□□□ 0.53
CLN6-219ENST00000637329 CHRNA5P30532 468 aa18.37■□□□□ 0.53
CLN6-219ENST00000637329 SPTY2D1Q68D10 685 aaPredicted RBP18.37■□□□□ 0.53
CLN6-219ENST00000637329 CCDC129Q6ZRS4 1044 aa18.37■□□□□ 0.53
CLN6-219ENST00000637329 COA1Q9GZY4 146 aa18.37■□□□□ 0.53
CLN6-219ENST00000637329 SNX14Q9Y5W7 946 aa18.37■□□□□ 0.53
CLN6-219ENST00000637329 ZMYM6O95789 1325 aa18.37■□□□□ 0.53
CLN6-219ENST00000637329 C6orf229H3BNL8 230 aa18.36■□□□□ 0.53
CLN6-219ENST00000637329 GPAA1O43292 621 aa18.36■□□□□ 0.53
CLN6-219ENST00000637329 CAPN15O75808 1086 aa18.36■□□□□ 0.53
CLN6-219ENST00000637329 TGFB2P61812 414 aa18.36■□□□□ 0.53
CLN6-219ENST00000637329 LAMA4Q16363 1823 aa18.36■□□□□ 0.53
CLN6-219ENST00000637329 CREB3L3Q68CJ9 461 aa18.36■□□□□ 0.53
CLN6-219ENST00000637329 MAGEB6Q8N7X4 407 aa18.36■□□□□ 0.53
CLN6-219ENST00000637329 RPAP1Q9BWH6 1393 aaPredicted RBP18.36■□□□□ 0.53
CLN6-219ENST00000637329 RTFDC1Q9BY42 306 aaPredicted RBP18.36■□□□□ 0.53
CLN6-219ENST00000637329 TBC1D2Q9BYX2 928 aa18.36■□□□□ 0.53
CLN6-219ENST00000637329 TM6SF1Q9BZW5 370 aa18.36■□□□□ 0.53
CLN6-219ENST00000637329 PUS7LQ9H0K6 701 aaKnown RBP18.36■□□□□ 0.53
CLN6-219ENST00000637329 CD209Q9NNX6 404 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms