RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 SPC25Q9HBM1 224 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 PAG1Q9NWQ8 432 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 CCDC102BQ68D86 513 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 CCT6BQ92526 530 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 RMND1Q9NWS8 449 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 CSADQ9Y600 493 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 PPIP5K1Q6PFW1 1433 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 TOPBP1Q92547 1522 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 KRT2P35908 639 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 SLFN5Q08AF3 891 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 CCDC25Q86WR0 208 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 MRRFQ96E11 262 aaKnown RBP10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 SH2D4AQ9H788 454 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 FANCAO15360 1455 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 GRM8O00222 908 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 TRPC3Q13507 836 aa10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 IFI16Q16666 785 aaKnown RBP10.05□□□□□ -0.8
CHRNA7-219ENST00000636709 E7EVH7 732 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 STRN3Q13033 797 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 C4orf50Q6ZRC1 276 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 STX1AQ16623 288 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 CWF19L2Q2TBE0 894 aaKnown RBP10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 MSANTD4Q8NCY6 345 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 MAGI1Q96QZ7 1491 aaPredicted RBP10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 TPD52P55327 224 aaPredicted RBP10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 KRT79Q5XKE5 535 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 C16orf45Q96MC5 204 aaPredicted RBP10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 AATFQ9NY61 560 aaKnown RBP eCLIP10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 ALDH1L2Q3SY69 923 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 PLVAPQ9BX97 442 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 CCNT1O60563 726 aaKnown RBP10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 GNAQP50148 359 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 FAM89AQ96GI7 184 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 AZI2Q9H6S1 392 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 RIOK3O14730 519 aaKnown RBP10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 CUL4BQ13620 913 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 DCPSQ96C86 337 aaKnown RBP10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 NBPF3Q9H094 633 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 LETM2Q2VYF4 491 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 WDR44Q5JSH3 913 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 KANK3Q6NY19 840 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 NSMFQ6X4W1 530 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 GSDMBQ8TAX9 411 aa10.04□□□□□ -0.8
CHRNA7-219ENST00000636709 ERCC5P28715 1186 aaPredicted RBP10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 TFCP2Q12800 502 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 GBP3Q9H0R5 595 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 SPDYE16A6NNV3 312 aaPredicted RBP10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 TAF5LO75529 589 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 Q3C1V9 767 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 SPDYE2Q495Y8 402 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 PYM1Q9BRP8 204 aaKnown RBP10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 PLB1Q6P1J6 1458 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 RARSP54136 660 aaKnown RBP10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 MCMDC2Q4G0Z9 681 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 CCDC155Q8N6L0 562 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 ZBED4O75132 1171 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 MED10Q9BTT4 135 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 FRMD4BQ9Y2L6 1034 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 CCDC184Q52MB2 194 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 C20orf194Q5TEA3 1177 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 HS2ST1Q7LGA3 356 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 SESTD1Q86VW0 696 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 BBXQ8WY36 941 aaPredicted RBP10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 IFT74Q96LB3 600 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 PCDH11XQ9BZA7 1347 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 PCDH11YQ9BZA8 1340 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 CALML3P27482 149 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 SPATA24Q86W54 205 aa10.03□□□□□ -0.8
CHRNA7-219ENST00000636709 SYNJ1O43426 1573 aa10.02□□□□□ -0.8
CHRNA7-219ENST00000636709 TCP10L2B9ZVM9 353 aa10.02□□□□□ -0.8
CHRNA7-219ENST00000636709 MCM3P25205 808 aa10.02□□□□□ -0.8
CHRNA7-219ENST00000636709 PRIM1P49642 420 aaKnown RBP10.02□□□□□ -0.8
CHRNA7-219ENST00000636709 AKAP4Q5JQC9 854 aa10.02□□□□□ -0.8
CHRNA7-219ENST00000636709 KIF18AQ8NI77 898 aa10.02□□□□□ -0.8
CHRNA7-219ENST00000636709 TRERF1Q96PN7 1200 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 ATP6V0A2Q9Y487 856 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 SSFA2P28290 1259 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 CCDC14Q49A88 953 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 IQGAP2Q13576 1575 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 STX17P56962 302 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 FAM193BQ96PV7 902 aaPredicted RBP10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 SELENOOQ9BVL4 669 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 CTAGE5O15320 804 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 TRIM27P14373 513 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 C6orf163Q5TEZ5 329 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 NCAPH2Q6IBW4 605 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 TMTC2Q8N394 836 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 CEP112Q8N8E3 955 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 RTL9Q8NET4 1388 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 RBM27Q9P2N5 1060 aaKnown RBP10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 RASAL2Q9UJF2 1139 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 STX10O60499 249 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 ZBTB16Q05516 673 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 CAPZA3Q96KX2 299 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 USP25Q9UHP3 1055 aa10.02□□□□□ -0.81
CHRNA7-219ENST00000636709 HIBADHP31937 336 aaKnown RBP10.01□□□□□ -0.81
CHRNA7-219ENST00000636709 CFAP157Q5JU67 520 aa10.01□□□□□ -0.81
CHRNA7-219ENST00000636709 ERCC3P19447 782 aa10.01□□□□□ -0.81
CHRNA7-219ENST00000636709 CCT6AP40227 531 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms