RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 SERPINC1P01008 464 aa16.79■□□□□ 0.28
PTBP1-221ENST00000635647 XRN1Q8IZH2 1706 aaKnown RBP16.79■□□□□ 0.28
PTBP1-221ENST00000635647 MED23Q9ULK4 1368 aa16.79■□□□□ 0.28
PTBP1-221ENST00000635647 SPECC1Q5M775 1068 aa16.79■□□□□ 0.28
PTBP1-221ENST00000635647 CACTINQ8WUQ7 758 aaKnown RBP16.79■□□□□ 0.28
PTBP1-221ENST00000635647 KCNB2Q92953 911 aa16.79■□□□□ 0.28
PTBP1-221ENST00000635647 FAM208AQ9UK61 1670 aaKnown RBP16.79■□□□□ 0.28
PTBP1-221ENST00000635647 POLR3GO15318 223 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-221ENST00000635647 GTF2F1P35269 517 aaKnown RBP eCLIP16.78■□□□□ 0.283e-7■■■■□ 21.2
PTBP1-221ENST00000635647 CTNNA3Q9UI47 895 aa16.78■□□□□ 0.28
PTBP1-221ENST00000635647 NWD1Q149M9 1564 aa16.78■□□□□ 0.28
PTBP1-221ENST00000635647 RAD21O60216 631 aa16.78■□□□□ 0.28
PTBP1-221ENST00000635647 DHX16O60231 1041 aaKnown RBP16.78■□□□□ 0.28
PTBP1-221ENST00000635647 PFKFB2O60825 505 aa16.78■□□□□ 0.28
PTBP1-221ENST00000635647 M0R2C6 588 aa16.78■□□□□ 0.28
PTBP1-221ENST00000635647 RFX5P48382 616 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-221ENST00000635647 PTPN14Q15678 1187 aa16.78■□□□□ 0.28
PTBP1-221ENST00000635647 LRP2BPQ9P2M1 347 aa16.78■□□□□ 0.28
PTBP1-221ENST00000635647 PDIA3P30101 505 aaKnown RBP16.77■□□□□ 0.28
PTBP1-221ENST00000635647 KLHL10Q6JEL2 608 aa16.77■□□□□ 0.28
PTBP1-221ENST00000635647 HELLSQ9NRZ9 838 aa16.77■□□□□ 0.28
PTBP1-221ENST00000635647 MAST3O60307 1309 aa16.77■□□□□ 0.28
PTBP1-221ENST00000635647 LMOD1P29536 600 aaPredicted RBP16.77■□□□□ 0.28
PTBP1-221ENST00000635647 DNAJC10Q8IXB1 793 aa16.77■□□□□ 0.28
PTBP1-221ENST00000635647 CCDC24Q8N4L8 307 aa16.77■□□□□ 0.28
PTBP1-221ENST00000635647 MIGA1Q8NAN2 632 aa16.77■□□□□ 0.28
PTBP1-221ENST00000635647 MRPS27Q92552 414 aaKnown RBP16.77■□□□□ 0.28
PTBP1-221ENST00000635647 XAGE2Q96GT9 111 aa16.77■□□□□ 0.28
PTBP1-221ENST00000635647 ZAP70P43403 619 aa16.77■□□□□ 0.27
PTBP1-221ENST00000635647 SKIDA1Q1XH10 827 aa16.77■□□□□ 0.27
PTBP1-221ENST00000635647 OSBP2Q969R2 916 aa16.77■□□□□ 0.27
PTBP1-221ENST00000635647 TRIM34Q9BYJ4 488 aa16.77■□□□□ 0.27
PTBP1-221ENST00000635647 GOLPH3LQ9H4A5 285 aa16.77■□□□□ 0.27
PTBP1-221ENST00000635647 TOPAZ1Q8N9V7 1692 aa16.76■□□□□ 0.27
PTBP1-221ENST00000635647 CCDC69A6NI79 296 aa16.76■□□□□ 0.27
PTBP1-221ENST00000635647 NBPF26B4DH59 902 aa16.76■□□□□ 0.27
PTBP1-221ENST00000635647 CCDC144BQ3MJ40 725 aa16.76■□□□□ 0.27
PTBP1-221ENST00000635647 NBPF14Q5TI25 921 aa16.76■□□□□ 0.27
PTBP1-221ENST00000635647 NBPF10Q6P3W6 841 aaKnown RBP16.76■□□□□ 0.27
PTBP1-221ENST00000635647 TMC6Q7Z403 805 aa16.76■□□□□ 0.27
PTBP1-221ENST00000635647 NBPF15Q8N660 670 aa16.76■□□□□ 0.27
PTBP1-221ENST00000635647 CTAGE5O15320 804 aa16.76■□□□□ 0.27
PTBP1-221ENST00000635647 CEP135Q66GS9 1140 aa16.76■□□□□ 0.27
PTBP1-221ENST00000635647 CMTR1Q8N1G2 835 aaKnown RBP16.76■□□□□ 0.27
PTBP1-221ENST00000635647 PHKBQ93100 1093 aa16.76■□□□□ 0.27
PTBP1-221ENST00000635647 UTYO14607 1347 aa16.76■□□□□ 0.27
PTBP1-221ENST00000635647 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
PTBP1-221ENST00000635647 ERICH2A1L162 156 aa16.76■□□□□ 0.27
PTBP1-221ENST00000635647 FAM160A1Q05DH4 1040 aa16.76■□□□□ 0.27
PTBP1-221ENST00000635647 COL15A1P39059 1388 aa16.75■□□□□ 0.27
PTBP1-221ENST00000635647 SLC3A2P08195 630 aaKnown RBP16.75■□□□□ 0.27
PTBP1-221ENST00000635647 RAI14Q9P0K7 980 aa16.75■□□□□ 0.27
PTBP1-221ENST00000635647 hCG_1642624A0A1W2PR95 340 aa16.75■□□□□ 0.27
PTBP1-221ENST00000635647 NPHP4O75161 1426 aaPredicted RBP16.75■□□□□ 0.27
PTBP1-221ENST00000635647 CFAP100Q494V2 611 aa16.75■□□□□ 0.27
PTBP1-221ENST00000635647 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.75■□□□□ 0.275e-9■□□□□ 10.2
PTBP1-221ENST00000635647 PCDHA7Q9UN72 937 aa16.75■□□□□ 0.27
PTBP1-221ENST00000635647 CLIC4Q9Y696 253 aa16.75■□□□□ 0.27
PTBP1-221ENST00000635647 ADGRL3Q9HAR2 1447 aa16.75■□□□□ 0.27
PTBP1-221ENST00000635647 SAFBQ15424 915 aaKnown RBP eCLIP16.75■□□□□ 0.27
PTBP1-221ENST00000635647 TIGD1Q96MW7 591 aa16.75■□□□□ 0.27
PTBP1-221ENST00000635647 NCOA7Q8NI08 942 aa16.74■□□□□ 0.27
PTBP1-221ENST00000635647 NAPBQ9H115 298 aa16.74■□□□□ 0.27
PTBP1-221ENST00000635647 AKAP2Q9Y2D5 859 aa16.74■□□□□ 0.27
PTBP1-221ENST00000635647 ARHGAP23Q9P227 1491 aa16.74■□□□□ 0.27
PTBP1-221ENST00000635647 IFIT3O14879 490 aaKnown RBP16.74■□□□□ 0.27
PTBP1-221ENST00000635647 STARD3NLO95772 234 aa16.74■□□□□ 0.27
PTBP1-221ENST00000635647 FGAP02671 866 aa16.74■□□□□ 0.27
PTBP1-221ENST00000635647 ZMYM1Q5SVZ6 1142 aa16.74■□□□□ 0.27
PTBP1-221ENST00000635647 LLPHQ9BRT6 129 aaKnown RBP16.74■□□□□ 0.27
PTBP1-221ENST00000635647 SLC26A6Q9BXS9 759 aa16.74■□□□□ 0.27
PTBP1-221ENST00000635647 NCAPD2Q15021 1401 aa16.74■□□□□ 0.27
PTBP1-221ENST00000635647 SPTLC2O15270 562 aa16.74■□□□□ 0.27
PTBP1-221ENST00000635647 NAA16Q6N069 864 aaPredicted RBP16.74■□□□□ 0.27
PTBP1-221ENST00000635647 TDRD7Q8NHU6 1098 aaKnown RBP16.74■□□□□ 0.27
PTBP1-221ENST00000635647 DSCC1Q9BVC3 393 aa16.74■□□□□ 0.27
PTBP1-221ENST00000635647 B4E1Z4 1266 aa16.73■□□□□ 0.27
PTBP1-221ENST00000635647 CTDNEP1O95476 244 aa16.73■□□□□ 0.27
PTBP1-221ENST00000635647 NDUFA8P51970 172 aa16.73■□□□□ 0.27
PTBP1-221ENST00000635647 TAF3Q5VWG9 929 aa16.73■□□□□ 0.27
PTBP1-221ENST00000635647 USPL1Q5W0Q7 1092 aa16.73■□□□□ 0.27
PTBP1-221ENST00000635647 ATG9AQ7Z3C6 839 aa16.73■□□□□ 0.27
PTBP1-221ENST00000635647 SPTLC3Q9NUV7 552 aa16.73■□□□□ 0.27
PTBP1-221ENST00000635647 IFNKQ9P0W0 207 aa16.73■□□□□ 0.27
PTBP1-221ENST00000635647 FOXO4P98177 505 aa16.73■□□□□ 0.27
PTBP1-221ENST00000635647 CPLX3Q8WVH0 158 aa16.73■□□□□ 0.27
PTBP1-221ENST00000635647 AIFM3Q96NN9 605 aa16.73■□□□□ 0.27
PTBP1-221ENST00000635647 OGFRQ9NZT2 677 aa16.73■□□□□ 0.27
PTBP1-221ENST00000635647 SLIT1O75093 1534 aa16.73■□□□□ 0.27
PTBP1-221ENST00000635647 GPAA1O43292 621 aa16.72■□□□□ 0.27
PTBP1-221ENST00000635647 TSGA10IPQ3SY00 556 aa16.72■□□□□ 0.27
PTBP1-221ENST00000635647 INCENPQ9NQS7 918 aa16.72■□□□□ 0.27
PTBP1-221ENST00000635647 ADD1P35611 737 aaKnown RBP16.72■□□□□ 0.27
PTBP1-221ENST00000635647 ALG1Q9BT22 464 aa16.72■□□□□ 0.27
PTBP1-221ENST00000635647 PUS7LQ9H0K6 701 aaKnown RBP16.72■□□□□ 0.27
PTBP1-221ENST00000635647 ASAP1Q9ULH1 1129 aa16.72■□□□□ 0.27
PTBP1-221ENST00000635647 SCARF1Q14162 830 aa16.72■□□□□ 0.27
PTBP1-221ENST00000635647 RCOR1Q9UKL0 485 aa16.72■□□□□ 0.27
PTBP1-221ENST00000635647 CACNA1FO60840 1977 aa16.72■□□□□ 0.27
PTBP1-221ENST00000635647 H7C1W4 665 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms