RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 HHIPQ96QV1 700 aa2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 MKNK1Q9BUB5 465 aa2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 METTL22Q9BUU2 404 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 KRTAP4-5Q9BYR2 181 aa2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 ADAM19Q9H013 955 aa2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 ABI2Q9NYB9 513 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 FNDC3AQ9Y2H6 1198 aaKnown RBP2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 CARMIL2Q6F5E8 1435 aa2.59□□□□□ -2
SMARCB1-209ENST00000635578 KRTAP9-7A8MTY7 169 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 PDE2AO00408 941 aaPredicted RBP2.58□□□□□ -2
SMARCB1-209ENST00000635578 BIN1O00499 593 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 PRMT3O60678 531 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 FARP2O94887 1054 aaPredicted RBP2.58□□□□□ -2
SMARCB1-209ENST00000635578 KIF4AO95239 1232 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 TIAF1O95411 115 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 DLGAP3O95886 979 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 RAB6AP20340 208 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 BRD2P25440 801 aaKnown RBP2.58□□□□□ -2
SMARCB1-209ENST00000635578 LMOD1P29536 600 aaPredicted RBP2.58□□□□□ -2
SMARCB1-209ENST00000635578 ZAP70P43403 619 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 ARL4DP49703 201 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 CPSF6Q16630 551 aaKnown RBP eCLIP2.58□□□□□ -2
SMARCB1-209ENST00000635578 DUSP27Q5VZP5 1158 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 C16orf46Q6P387 395 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 ZNF765Q7L2R6 523 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 ZAR1Q86SH2 424 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 FAM200AQ8TCP9 573 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 WNT8BQ93098 351 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 PPP1R12CQ9BZL4 782 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 VRTNQ9H8Y1 702 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 CYP4F12Q9HCS2 524 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 OSGEPQ9NPF4 335 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 PRKAG2Q9UGJ0 569 aa2.58□□□□□ -2
SMARCB1-209ENST00000635578 ZC3H7BQ9UGR2 993 aaKnown RBP2.58□□□□□ -2
SMARCB1-209ENST00000635578 LOC100289279A0A1B0GTE1 492 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 MEGF11A6BM72 1044 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 TNFRSF10BO14763 440 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 NFICP08651 508 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 IKBKEQ14164 716 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 NAA30Q147X3 362 aaPredicted RBP2.57□□□□□ -2
SMARCB1-209ENST00000635578 CDCA8Q53HL2 280 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 CAPN12Q6ZSI9 719 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 ZNF438Q7Z4V0 828 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 SPRED2Q7Z698 418 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 C2CD4AQ8NCU7 369 aaPredicted RBP2.57□□□□□ -2
SMARCB1-209ENST00000635578 SMG8Q8ND04 991 aaKnown RBP2.57□□□□□ -2
SMARCB1-209ENST00000635578 FAM168AQ92567 244 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 CALR3Q96L12 384 aaKnown RBP2.57□□□□□ -2
SMARCB1-209ENST00000635578 TMPRSS13Q9BYE2 586 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 ELP3Q9H9T3 547 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 FAM13BQ9NYF5 915 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 TMEM63CQ9P1W3 806 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 CNTN3Q9P232 1028 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 SLC5A6Q9Y289 635 aa2.57□□□□□ -2
SMARCB1-209ENST00000635578 ZBTB39O15060 712 aa2.56□□□□□ -2
SMARCB1-209ENST00000635578 RFX1P22670 979 aa2.56□□□□□ -2
SMARCB1-209ENST00000635578 CES1P23141 567 aa2.56□□□□□ -2
SMARCB1-209ENST00000635578 BNIP3Q12983 259 aa2.56□□□□□ -2
SMARCB1-209ENST00000635578 ASAP3Q8TDY4 903 aa2.56□□□□□ -2
SMARCB1-209ENST00000635578 BCL7CQ8WUZ0 217 aaPredicted RBP2.56□□□□□ -2
SMARCB1-209ENST00000635578 GATA6Q92908 595 aa2.56□□□□□ -2
SMARCB1-209ENST00000635578 SLC38A3Q99624 504 aa2.56□□□□□ -2
SMARCB1-209ENST00000635578 YIPF2Q9BWQ6 316 aa2.56□□□□□ -2
SMARCB1-209ENST00000635578 SUGCTQ9HAC7 445 aa2.56□□□□□ -2
SMARCB1-209ENST00000635578 RC3H2Q9HBD1 1191 aaKnown RBP2.56□□□□□ -2
SMARCB1-209ENST00000635578 LGR6Q9HBX8 967 aa2.56□□□□□ -2
SMARCB1-209ENST00000635578 DZANK1Q9NVP4 752 aa2.56□□□□□ -2
SMARCB1-209ENST00000635578 SOX13Q9UN79 622 aa2.56□□□□□ -2
SMARCB1-209ENST00000635578 NFKBIEO00221 500 aa2.55□□□□□ -2
SMARCB1-209ENST00000635578 SOX1O00570 391 aaPredicted RBP2.55□□□□□ -2
SMARCB1-209ENST00000635578 ADH5P11766 374 aa2.55□□□□□ -2
SMARCB1-209ENST00000635578 CD96P40200 585 aa2.55□□□□□ -2
SMARCB1-209ENST00000635578 GSTM4Q03013 218 aa2.55□□□□□ -2
SMARCB1-209ENST00000635578 SOX4Q06945 474 aaPredicted RBP2.55□□□□□ -2
SMARCB1-209ENST00000635578 TPRNQ4KMQ1 711 aa2.55□□□□□ -2
SMARCB1-209ENST00000635578 DYMQ7RTS9 669 aa2.55□□□□□ -2
SMARCB1-209ENST00000635578 VN1R5Q7Z5H4 357 aa2.55□□□□□ -2
SMARCB1-209ENST00000635578 ATCAYQ86WG3 371 aa2.55□□□□□ -2
SMARCB1-209ENST00000635578 C1orf127Q8N9H9 656 aa2.55□□□□□ -2
SMARCB1-209ENST00000635578 FAM181AQ8N9Y4 354 aa2.55□□□□□ -2
SMARCB1-209ENST00000635578 CLUAP1Q96AJ1 413 aa2.55□□□□□ -2
SMARCB1-209ENST00000635578 NUDT16Q96DE0 195 aaKnown RBP2.55□□□□□ -2
SMARCB1-209ENST00000635578 ADAMTS6Q9UKP5 1117 aa2.55□□□□□ -2
SMARCB1-209ENST00000635578 NOVA2Q9UNW9 492 aaKnown RBP2.55□□□□□ -2
SMARCB1-209ENST00000635578 ACTL7BQ9Y614 415 aa2.55□□□□□ -2
SMARCB1-209ENST00000635578 A6NHS1 94 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 LRRC10BA6NIK2 292 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 DYNC1LI2O43237 492 aaPredicted RBP2.54□□□□□ -2
SMARCB1-209ENST00000635578 CYP27A1Q02318 531 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 FLIIQ13045 1269 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 MAP7Q14244 749 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 OCLNQ16625 522 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 AKAP4Q5JQC9 854 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 EXOSC6Q5RKV6 272 aaKnown RBP2.54□□□□□ -2
SMARCB1-209ENST00000635578 LCE5AQ5TCM9 118 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 PDE12Q6L8Q7 609 aaKnown RBP2.54□□□□□ -2
SMARCB1-209ENST00000635578 LILRA6Q6PI73 481 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 ATG4DQ86TL0 474 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms