RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 SASH1O94885 1247 aa17.48■□□□□ 0.39
PMS1-221ENST00000624204 MAGEA9P43362 315 aa17.48■□□□□ 0.39
PMS1-221ENST00000624204 HSP90B2PQ58FF3 399 aa17.48■□□□□ 0.39
PMS1-221ENST00000624204 BAG1Q99933 345 aaPredicted RBP17.48■□□□□ 0.39
PMS1-221ENST00000624204 ACEP12821 1306 aa17.48■□□□□ 0.39
PMS1-221ENST00000624204 PRR36Q9H6K5 1346 aa17.48■□□□□ 0.39
PMS1-221ENST00000624204 PLEKHG2Q9H7P9 1386 aa17.48■□□□□ 0.39
PMS1-221ENST00000624204 CTDNEP1O95476 244 aa17.48■□□□□ 0.39
PMS1-221ENST00000624204 MTX1Q13505 466 aa17.48■□□□□ 0.39
PMS1-221ENST00000624204 RSRC2Q7L4I2 434 aaKnown RBP17.48■□□□□ 0.39
PMS1-221ENST00000624204 SMARCC2Q8TAQ2 1214 aa17.48■□□□□ 0.39
PMS1-221ENST00000624204 GEMIN8Q9NWZ8 242 aaKnown RBP17.48■□□□□ 0.39
PMS1-221ENST00000624204 ADKP55263 362 aaKnown RBP17.47■□□□□ 0.39
PMS1-221ENST00000624204 CHMP4BP1P59074 171 aa17.47■□□□□ 0.39
PMS1-221ENST00000624204 TOGARAM2Q6ZUX3 1019 aa17.47■□□□□ 0.39
PMS1-221ENST00000624204 LZTFL1Q9NQ48 299 aa17.47■□□□□ 0.39
PMS1-221ENST00000624204 RHOXF2BP0C7M4 288 aa17.47■□□□□ 0.39
PMS1-221ENST00000624204 ILDR1Q86SU0 546 aaPredicted RBP17.47■□□□□ 0.39
PMS1-221ENST00000624204 RHOXF2Q9BQY4 288 aa17.47■□□□□ 0.39
PMS1-221ENST00000624204 TEX2Q8IWB9 1127 aa17.47■□□□□ 0.39
PMS1-221ENST00000624204 XRN1Q8IZH2 1706 aaKnown RBP17.47■□□□□ 0.39
PMS1-221ENST00000624204 PFKFB2O60825 505 aa17.46■□□□□ 0.39
PMS1-221ENST00000624204 EIF3JO75822 258 aaKnown RBP17.46■□□□□ 0.39
PMS1-221ENST00000624204 BPIFA3Q9BQP9 254 aa17.46■□□□□ 0.39
PMS1-221ENST00000624204 RIMS1Q86UR5 1692 aaKnown RBP17.46■□□□□ 0.39
PMS1-221ENST00000624204 MED23Q9ULK4 1368 aa17.46■□□□□ 0.39
PMS1-221ENST00000624204 SPTLC2O15270 562 aa17.46■□□□□ 0.39
PMS1-221ENST00000624204 KCNQ3O43525 872 aa17.46■□□□□ 0.39
PMS1-221ENST00000624204 HDXQ7Z353 690 aa17.46■□□□□ 0.39
PMS1-221ENST00000624204 SECISBP2LQ93073 1101 aaKnown RBP17.46■□□□□ 0.39
PMS1-221ENST00000624204 LLPHQ9BRT6 129 aaKnown RBP17.46■□□□□ 0.39
PMS1-221ENST00000624204 MAP3K2Q9Y2U5 619 aa17.46■□□□□ 0.39
PMS1-221ENST00000624204 GUCY2CP25092 1073 aa17.46■□□□□ 0.38
PMS1-221ENST00000624204 MYL5Q02045 173 aa17.46■□□□□ 0.38
PMS1-221ENST00000624204 SYNE3Q6ZMZ3 975 aa17.46■□□□□ 0.38
PMS1-221ENST00000624204 LINC00301Q8NCQ3 95 aa17.46■□□□□ 0.38
PMS1-221ENST00000624204 WDHD1O75717 1129 aaPredicted RBP17.45■□□□□ 0.38
PMS1-221ENST00000624204 ATP2B1P20020 1258 aa17.45■□□□□ 0.38
PMS1-221ENST00000624204 BRD3Q15059 726 aa17.45■□□□□ 0.38
PMS1-221ENST00000624204 NBPF6Q5VWK0 638 aa17.45■□□□□ 0.38
PMS1-221ENST00000624204 DDX46Q7L014 1031 aaKnown RBP17.45■□□□□ 0.38
PMS1-221ENST00000624204 NBPF4Q96M43 638 aa17.45■□□□□ 0.38
PMS1-221ENST00000624204 FANCLQ9NW38 375 aa17.45■□□□□ 0.38
PMS1-221ENST00000624204 DLC1Q96QB1 1528 aa17.45■□□□□ 0.38
PMS1-221ENST00000624204 PIP4K2AP48426 406 aaPredicted RBP17.45■□□□□ 0.38
PMS1-221ENST00000624204 ATL3Q6DD88 541 aa17.45■□□□□ 0.38
PMS1-221ENST00000624204 VSTM4Q8IW00 320 aa17.45■□□□□ 0.38
PMS1-221ENST00000624204 MYCBPQ99417 103 aaPredicted RBP17.45■□□□□ 0.38
PMS1-221ENST00000624204 ALDH1L1O75891 902 aa17.44■□□□□ 0.38
PMS1-221ENST00000624204 TSGA10IPQ3SY00 556 aa17.44■□□□□ 0.38
PMS1-221ENST00000624204 PXDNLA1KZ92 1463 aa17.44■□□□□ 0.38
PMS1-221ENST00000624204 IQUBQ8NA54 791 aa17.44■□□□□ 0.38
PMS1-221ENST00000624204 U3KPZ7 1027 aaPredicted RBP17.44■□□□□ 0.38
PMS1-221ENST00000624204 ERLIN1O75477 346 aa17.44■□□□□ 0.38
PMS1-221ENST00000624204 PFKFB1P16118 471 aa17.44■□□□□ 0.38
PMS1-221ENST00000624204 SPECC1Q5M775 1068 aa17.44■□□□□ 0.38
PMS1-221ENST00000624204 STOX1Q6ZVD7 989 aa17.44■□□□□ 0.38
PMS1-221ENST00000624204 KCNG4Q8TDN1 519 aa17.44■□□□□ 0.38
PMS1-221ENST00000624204 PPM1EQ8WY54 764 aa17.44■□□□□ 0.38
PMS1-221ENST00000624204 BICC1Q9H694 974 aaKnown RBP17.44■□□□□ 0.38
PMS1-221ENST00000624204 ABCB6Q9NP58 842 aa17.44■□□□□ 0.38
PMS1-221ENST00000624204 RTEL1Q9NZ71 1219 aa17.44■□□□□ 0.38
PMS1-221ENST00000624204 A0A1W2PQ27 194 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 A0A1W2PQ64 194 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 A0A1W2PQD8 194 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 GOLGA6L9A6NEM1 432 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 MAP2K7O14733 419 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 HAND2P61296 217 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 SIRT1Q96EB6 747 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 GPHNQ9NQX3 736 aaPredicted RBP17.43■□□□□ 0.38
PMS1-221ENST00000624204 A0A0G2JLW4 131 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
PMS1-221ENST00000624204 DHX32Q7L7V1 743 aaKnown RBP17.43■□□□□ 0.38
PMS1-221ENST00000624204 CNNM3Q8NE01 707 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 NCAPGQ9BPX3 1015 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 BEND6Q5SZJ8 279 aaPredicted RBP17.43■□□□□ 0.38
PMS1-221ENST00000624204 FKBP15Q5T1M5 1219 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 OLFM4Q6UX06 510 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 PNKPQ96T60 521 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 HSD3B7Q9H2F3 369 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 BRMS1Q9HCU9 246 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 AKAP2Q9Y2D5 859 aa17.43■□□□□ 0.38
PMS1-221ENST00000624204 IKBKBO14920 756 aa17.42■□□□□ 0.38
PMS1-221ENST00000624204 PNOCQ13519 176 aa17.42■□□□□ 0.38
PMS1-221ENST00000624204 FCHSD1Q86WN1 690 aa17.42■□□□□ 0.38
PMS1-221ENST00000624204 MLH3Q9UHC1 1453 aa17.42■□□□□ 0.38
PMS1-221ENST00000624204 MTF1Q14872 753 aa17.42■□□□□ 0.38
PMS1-221ENST00000624204 LONRF3Q496Y0 759 aa17.42■□□□□ 0.38
PMS1-221ENST00000624204 MICALL1Q8N3F8 863 aa17.42■□□□□ 0.38
PMS1-221ENST00000624204 KIFC2Q96AC6 838 aa17.42■□□□□ 0.38
PMS1-221ENST00000624204 C8orf76Q96K31 380 aa17.42■□□□□ 0.38
PMS1-221ENST00000624204 COL15A1P39059 1388 aa17.41■□□□□ 0.38
PMS1-221ENST00000624204 SYKP43405 635 aa17.41■□□□□ 0.38
PMS1-221ENST00000624204 SUCLG2Q96I99 432 aa17.41■□□□□ 0.38
PMS1-221ENST00000624204 KIF4BQ2VIQ3 1234 aa17.41■□□□□ 0.38
PMS1-221ENST00000624204 SRGAP1Q7Z6B7 1085 aa17.41■□□□□ 0.38
PMS1-221ENST00000624204 TMEM139Q8IV31 216 aa17.41■□□□□ 0.38
PMS1-221ENST00000624204 HSP90AB3PQ58FF7 597 aa17.41■□□□□ 0.38
PMS1-221ENST00000624204 USPL1Q5W0Q7 1092 aa17.41■□□□□ 0.38
PMS1-221ENST00000624204 NEUROD6Q96NK8 337 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms