RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 HFM1A2PYH4 1435 aa10.17□□□□□ -0.78
CDKL5-206ENST00000623610 ARHGAP31Q2M1Z3 1444 aa10.17□□□□□ -0.78
CDKL5-206ENST00000623610 SPATA31D1Q6ZQQ2 1576 aa10.17□□□□□ -0.78
CDKL5-206ENST00000623610 CEP170BQ9Y4F5 1589 aaPredicted RBP10.17□□□□□ -0.78
CDKL5-206ENST00000623610 NUP155O75694 1391 aa10.17□□□□□ -0.78
CDKL5-206ENST00000623610 MAP3K7O43318 606 aa10.17□□□□□ -0.78
CDKL5-206ENST00000623610 PIP5K1CO60331 668 aa10.17□□□□□ -0.78
CDKL5-206ENST00000623610 ANO1Q5XXA6 986 aa10.17□□□□□ -0.78
CDKL5-206ENST00000623610 SMAP1Q8IYB5 467 aaPredicted RBP10.17□□□□□ -0.78
CDKL5-206ENST00000623610 POLR3CQ9BUI4 534 aaPredicted RBP10.17□□□□□ -0.78
CDKL5-206ENST00000623610 ZNF700Q9H0M5 742 aa10.17□□□□□ -0.78
CDKL5-206ENST00000623610 METTL5Q9NRN9 209 aaKnown RBP10.17□□□□□ -0.78
CDKL5-206ENST00000623610 COMMD8Q9NX08 183 aa10.17□□□□□ -0.78
CDKL5-206ENST00000623610 C9orf78Q9NZ63 289 aaPredicted RBP10.17□□□□□ -0.78
CDKL5-206ENST00000623610 EFCAB6Q5THR3 1501 aa10.17□□□□□ -0.78
CDKL5-206ENST00000623610 SPDYE16A6NNV3 312 aaPredicted RBP10.16□□□□□ -0.78
CDKL5-206ENST00000623610 SOCS7O14512 581 aa10.16□□□□□ -0.78
CDKL5-206ENST00000623610 ATP2B4P23634 1241 aa10.16□□□□□ -0.78
CDKL5-206ENST00000623610 MASP1P48740 699 aa10.16□□□□□ -0.78
CDKL5-206ENST00000623610 NUCB1Q02818 461 aa10.16□□□□□ -0.78
CDKL5-206ENST00000623610 TRIM29Q14134 588 aa10.16□□□□□ -0.78
CDKL5-206ENST00000623610 KIAA1614Q5VZ46 1190 aa10.16□□□□□ -0.78
CDKL5-206ENST00000623610 ARL6IP6Q8N6S5 226 aa10.16□□□□□ -0.78
CDKL5-206ENST00000623610 SRPK1Q96SB4 655 aaKnown RBP10.16□□□□□ -0.78
CDKL5-206ENST00000623610 DCAF16Q9NXF7 216 aa10.16□□□□□ -0.78
CDKL5-206ENST00000623610 ZNF142P52746 1687 aaPredicted RBP10.16□□□□□ -0.78
CDKL5-206ENST00000623610 EPB42P16452 691 aa10.16□□□□□ -0.78
CDKL5-206ENST00000623610 ANKRD42Q8N9B4 389 aa10.16□□□□□ -0.78
CDKL5-206ENST00000623610 UHMK1Q8TAS1 419 aaKnown RBP10.16□□□□□ -0.78
CDKL5-206ENST00000623610 SETD5Q9C0A6 1442 aa10.16□□□□□ -0.78
CDKL5-206ENST00000623610 GTPBP10A4D1E9 387 aaKnown RBP10.15□□□□□ -0.78
CDKL5-206ENST00000623610 BOLA2-SMG1P6H3BVE0 249 aa10.15□□□□□ -0.78
CDKL5-206ENST00000623610 RACK1P63244 317 aaKnown RBP10.15□□□□□ -0.78
CDKL5-206ENST00000623610 HYIQ5T013 277 aa10.15□□□□□ -0.78
CDKL5-206ENST00000623610 ZNF449Q6P9G9 518 aa10.15□□□□□ -0.78
CDKL5-206ENST00000623610 CPXCR1Q8N123 301 aa10.15□□□□□ -0.78
CDKL5-206ENST00000623610 SELENOOQ9BVL4 669 aa10.15□□□□□ -0.78
CDKL5-206ENST00000623610 PDCL3Q9H2J4 239 aa10.15□□□□□ -0.78
CDKL5-206ENST00000623610 SH3GLB2Q9NR46 395 aa10.15□□□□□ -0.78
CDKL5-206ENST00000623610 CNTN3Q9P232 1028 aa10.15□□□□□ -0.78
CDKL5-206ENST00000623610 DCTN4Q9UJW0 460 aa10.15□□□□□ -0.78
CDKL5-206ENST00000623610 IKBKGQ9Y6K9 419 aa10.15□□□□□ -0.78
CDKL5-206ENST00000623610 NDUFB9Q9Y6M9 179 aa10.15□□□□□ -0.78
CDKL5-206ENST00000623610 IQGAP3Q86VI3 1631 aa10.15□□□□□ -0.78
CDKL5-206ENST00000623610 STRCQ7RTU9 1775 aa10.15□□□□□ -0.78
CDKL5-206ENST00000623610 TET3O43151 1660 aa10.15□□□□□ -0.78
CDKL5-206ENST00000623610 PRMT3O60678 531 aa10.15□□□□□ -0.79
CDKL5-206ENST00000623610 AP1G2O75843 785 aa10.15□□□□□ -0.79
CDKL5-206ENST00000623610 NCAM1P13591 858 aa10.15□□□□□ -0.79
CDKL5-206ENST00000623610 GLULP15104 373 aa10.15□□□□□ -0.79
CDKL5-206ENST00000623610 MECOMQ03112 1051 aa10.15□□□□□ -0.79
CDKL5-206ENST00000623610 RASSF3Q86WH2 238 aa10.15□□□□□ -0.79
CDKL5-206ENST00000623610 ZNF713Q8N859 430 aaPredicted RBP10.15□□□□□ -0.79
CDKL5-206ENST00000623610 SH3KBP1Q96B97 665 aa10.15□□□□□ -0.79
CDKL5-206ENST00000623610 EMILIN3Q9NT22 766 aa10.15□□□□□ -0.79
CDKL5-206ENST00000623610 TBK1Q9UHD2 729 aa10.15□□□□□ -0.79
CDKL5-206ENST00000623610 A2ML1A8K2U0 1454 aa10.14□□□□□ -0.79
CDKL5-206ENST00000623610 FCHSD2O94868 740 aa10.14□□□□□ -0.79
CDKL5-206ENST00000623610 RHOBTB3O94955 611 aa10.14□□□□□ -0.79
CDKL5-206ENST00000623610 SNX16P57768 344 aa10.14□□□□□ -0.79
CDKL5-206ENST00000623610 CCDC158Q5M9N0 1113 aa10.14□□□□□ -0.79
CDKL5-206ENST00000623610 CFAP161Q6P656 301 aa10.14□□□□□ -0.79
CDKL5-206ENST00000623610 OTUD6AQ7L8S5 288 aa10.14□□□□□ -0.79
CDKL5-206ENST00000623610 JPH3Q8WXH2 748 aaPredicted RBP10.14□□□□□ -0.79
CDKL5-206ENST00000623610 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.14□□□□□ -0.79
CDKL5-206ENST00000623610 GINM1Q9NU53 330 aa10.14□□□□□ -0.79
CDKL5-206ENST00000623610 MKS1Q9NXB0 559 aa10.14□□□□□ -0.79
CDKL5-206ENST00000623610 NLRP1Q9C000 1473 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 CTAGE5O15320 804 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 PSMA3P25788 255 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 FXNQ16595 210 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 FAM133BQ5BKY9 247 aaKnown RBP10.13□□□□□ -0.79
CDKL5-206ENST00000623610 METTL3Q86U44 580 aaKnown RBP10.13□□□□□ -0.79
CDKL5-206ENST00000623610 PHC3Q8NDX5 983 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 ABCG4Q9H172 646 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 GTF2A1LQ9UNN4 478 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 SPG7Q9UQ90 795 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 E9PCH4 1651 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 MAP3K13O43283 966 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 TCEA3O75764 348 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 USP17L8P0C7I0 530 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 PPM1FP49593 454 aaPredicted RBP10.13□□□□□ -0.79
CDKL5-206ENST00000623610 INHBEP58166 350 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 ECM1Q16610 540 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 DALRD3Q5D0E6 543 aaKnown RBP10.13□□□□□ -0.79
CDKL5-206ENST00000623610 C11orf74Q86VG3 221 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 BRSK2Q8IWQ3 736 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 TTC8Q8TAM2 541 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 SH3TC2Q8TF17 1288 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 TRIM6Q9C030 488 aaPredicted RBP10.13□□□□□ -0.79
CDKL5-206ENST00000623610 RABL2AQ9UBK7 228 aaPredicted RBP10.13□□□□□ -0.79
CDKL5-206ENST00000623610 UGGT1Q9NYU2 1555 aa10.13□□□□□ -0.79
CDKL5-206ENST00000623610 SYNMO15061 1565 aa10.12□□□□□ -0.79
CDKL5-206ENST00000623610 IPO7O95373 1038 aaKnown RBP10.12□□□□□ -0.79
CDKL5-206ENST00000623610 CDC37L1Q7L3B6 337 aa10.12□□□□□ -0.79
CDKL5-206ENST00000623610 MCM10Q7L590 875 aa10.12□□□□□ -0.79
CDKL5-206ENST00000623610 ZSCAN29Q8IWY8 852 aaPredicted RBP10.12□□□□□ -0.79
CDKL5-206ENST00000623610 GPHNQ9NQX3 736 aaPredicted RBP10.12□□□□□ -0.79
CDKL5-206ENST00000623610 UTP6Q9NYH9 597 aaKnown RBP10.12□□□□□ -0.79
CDKL5-206ENST00000623610 NOS1P29475 1434 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms