RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 PSMA5P28066 241 aa22■■□□□ 1.11
PCDHB2-202ENST00000622947 TTF1Q15361 905 aaPredicted RBP22■■□□□ 1.11
PCDHB2-202ENST00000622947 TCRBV5S4A2TA0A5A2 114 aa22■■□□□ 1.11
PCDHB2-202ENST00000622947 GYG1P46976 350 aa22■■□□□ 1.11
PCDHB2-202ENST00000622947 ST3GAL1Q11201 340 aa22■■□□□ 1.11
PCDHB2-202ENST00000622947 PRR5LQ6MZQ0 368 aa22■■□□□ 1.11
PCDHB2-202ENST00000622947 BLOC1S2Q6QNY1 142 aa22■■□□□ 1.11
PCDHB2-202ENST00000622947 RGS17Q9UGC6 210 aaPredicted RBP22■■□□□ 1.11
PCDHB2-202ENST00000622947 IQSEC3Q9UPP2 1182 aaPredicted RBP22■■□□□ 1.11
PCDHB2-202ENST00000622947 DTNBO60941 627 aa21.99■■□□□ 1.11
PCDHB2-202ENST00000622947 KLRK1P26718 216 aa21.99■■□□□ 1.11
PCDHB2-202ENST00000622947 ZNF827Q17R98 1081 aa21.99■■□□□ 1.11
PCDHB2-202ENST00000622947 LRRFIP1Q32MZ4 808 aaKnown RBP21.99■■□□□ 1.11
PCDHB2-202ENST00000622947 PANK2Q9BZ23 570 aa21.99■■□□□ 1.11
PCDHB2-202ENST00000622947 TPCN1Q9ULQ1 816 aa21.99■■□□□ 1.11
PCDHB2-202ENST00000622947 ZNF804BA4D1E1 1349 aa21.99■■□□□ 1.11
PCDHB2-202ENST00000622947 PDE6AP16499 860 aa21.99■■□□□ 1.11
PCDHB2-202ENST00000622947 TOB2Q14106 344 aaPredicted RBP21.99■■□□□ 1.11
PCDHB2-202ENST00000622947 CNBD1Q8NA66 436 aa21.99■■□□□ 1.11
PCDHB2-202ENST00000622947 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.99■■□□□ 1.11
PCDHB2-202ENST00000622947 ZNF532Q9HCE3 1301 aa21.98■■□□□ 1.11
PCDHB2-202ENST00000622947 GPAA1O43292 621 aa21.98■■□□□ 1.11
PCDHB2-202ENST00000622947 UBE4AQ14139 1066 aa21.98■■□□□ 1.11
PCDHB2-202ENST00000622947 ME3Q16798 604 aa21.98■■□□□ 1.11
PCDHB2-202ENST00000622947 COL1A1P02452 1464 aaPredicted RBP21.98■■□□□ 1.11
PCDHB2-202ENST00000622947 NPHP1O15259 732 aa21.98■■□□□ 1.11
PCDHB2-202ENST00000622947 NEK1Q96PY6 1258 aa21.98■■□□□ 1.11
PCDHB2-202ENST00000622947 APBA3O96018 575 aa21.97■■□□□ 1.11
PCDHB2-202ENST00000622947 RXRBP28702 533 aa21.97■■□□□ 1.11
PCDHB2-202ENST00000622947 MRE11P49959 708 aa21.97■■□□□ 1.11
PCDHB2-202ENST00000622947 NUCB2P80303 420 aa21.97■■□□□ 1.11
PCDHB2-202ENST00000622947 UBE3CQ15386 1083 aa21.97■■□□□ 1.11
PCDHB2-202ENST00000622947 PLSCR1O15162 318 aa21.96■■□□□ 1.11
PCDHB2-202ENST00000622947 DDR1Q08345 913 aa21.96■■□□□ 1.11
PCDHB2-202ENST00000622947 KRT32Q14532 448 aa21.96■■□□□ 1.11
PCDHB2-202ENST00000622947 FAM84BQ96KN1 310 aaPredicted RBP21.96■■□□□ 1.11
PCDHB2-202ENST00000622947 ESPNB1AK53 854 aa21.96■■□□□ 1.11
PCDHB2-202ENST00000622947 FGAP02671 866 aa21.96■■□□□ 1.11
PCDHB2-202ENST00000622947 CLEC17AQ6ZS10 378 aa21.96■■□□□ 1.11
PCDHB2-202ENST00000622947 ALDH8A1Q9H2A2 487 aaPredicted RBP21.96■■□□□ 1.11
PCDHB2-202ENST00000622947 SERPINB2P05120 415 aa21.95■■□□□ 1.1
PCDHB2-202ENST00000622947 ZSCAN25Q6NSZ9 544 aa21.95■■□□□ 1.1
PCDHB2-202ENST00000622947 NECAB1Q8N987 351 aa21.95■■□□□ 1.1
PCDHB2-202ENST00000622947 CCDC83Q8IWF9 413 aa21.94■■□□□ 1.1
PCDHB2-202ENST00000622947 MAGEB6Q8N7X4 407 aa21.94■■□□□ 1.1
PCDHB2-202ENST00000622947 AKT1S1Q96B36 256 aa21.94■■□□□ 1.1
PCDHB2-202ENST00000622947 CHAMP1Q96JM3 812 aa21.94■■□□□ 1.1
PCDHB2-202ENST00000622947 E7EWF7 191 aa21.94■■□□□ 1.1
PCDHB2-202ENST00000622947 BAG4O95429 457 aaKnown RBP21.93■■□□□ 1.1
PCDHB2-202ENST00000622947 LRRC2Q9BYS8 371 aa21.93■■□□□ 1.1
PCDHB2-202ENST00000622947 DDX11L8A8MPP1 907 aa21.92■■□□□ 1.1
PCDHB2-202ENST00000622947 POLRMTO00411 1230 aaKnown RBP21.92■■□□□ 1.1
PCDHB2-202ENST00000622947 HAND2P61296 217 aa21.92■■□□□ 1.1
PCDHB2-202ENST00000622947 FOXD4L5Q5VV16 416 aaPredicted RBP21.92■■□□□ 1.1
PCDHB2-202ENST00000622947 POTEAQ6S8J7 498 aa21.92■■□□□ 1.1
PCDHB2-202ENST00000622947 TXNRD3Q86VQ6 643 aa21.92■■□□□ 1.1
PCDHB2-202ENST00000622947 FOXD4L4Q8WXT5 416 aaPredicted RBP21.92■■□□□ 1.1
PCDHB2-202ENST00000622947 TNS1Q9HBL0 1735 aaKnown RBP21.92■■□□□ 1.1
PCDHB2-202ENST00000622947 BRD1O95696 1058 aa21.92■■□□□ 1.1
PCDHB2-202ENST00000622947 FBXO33Q7Z6M2 555 aa21.92■■□□□ 1.1
PCDHB2-202ENST00000622947 ZSCAN31Q96LW9 406 aaPredicted RBP21.92■■□□□ 1.1
PCDHB2-202ENST00000622947 GBP4Q96PP9 640 aa21.92■■□□□ 1.1
PCDHB2-202ENST00000622947 TFCP2L1Q9NZI6 479 aa21.92■■□□□ 1.1
PCDHB2-202ENST00000622947 IRS2Q9Y4H2 1338 aa21.91■■□□□ 1.1
PCDHB2-202ENST00000622947 MAP3K12Q12852 859 aa21.91■■□□□ 1.1
PCDHB2-202ENST00000622947 CRY2Q49AN0 593 aa21.91■■□□□ 1.1
PCDHB2-202ENST00000622947 COL23A1Q86Y22 540 aaPredicted RBP21.91■■□□□ 1.1
PCDHB2-202ENST00000622947 STRBPQ96SI9 672 aaKnown RBP21.91■■□□□ 1.1
PCDHB2-202ENST00000622947 SH2B1Q9NRF2 756 aaPredicted RBP21.91■■□□□ 1.1
PCDHB2-202ENST00000622947 GRAPQ13588 217 aa21.91■■□□□ 1.1
PCDHB2-202ENST00000622947 Q6ZUG5 572 aa21.91■■□□□ 1.1
PCDHB2-202ENST00000622947 GRAPLQ8TC17 118 aaPredicted RBP21.91■■□□□ 1.1
PCDHB2-202ENST00000622947 EXOSC10Q01780 885 aaKnown RBP21.9■■□□□ 1.1
PCDHB2-202ENST00000622947 TRAK2O60296 914 aa21.9■■□□□ 1.1
PCDHB2-202ENST00000622947 CAVIN4Q5BKX8 364 aa21.9■■□□□ 1.1
PCDHB2-202ENST00000622947 ANKRD2Q9GZV1 360 aa21.9■■□□□ 1.1
PCDHB2-202ENST00000622947 NBPF3Q9H094 633 aa21.9■■□□□ 1.1
PCDHB2-202ENST00000622947 ISY1Q9ULR0 285 aaKnown RBP21.9■■□□□ 1.1
PCDHB2-202ENST00000622947 CACNA1SQ13698 1873 aa21.89■■□□□ 1.09
PCDHB2-202ENST00000622947 DHX32Q7L7V1 743 aaKnown RBP21.89■■□□□ 1.09
PCDHB2-202ENST00000622947 ADGRA1Q86SQ6 560 aa21.89■■□□□ 1.09
PCDHB2-202ENST00000622947 MYH13Q9UKX3 1938 aa21.89■■□□□ 1.09
PCDHB2-202ENST00000622947 ANKRD1Q15327 319 aa21.88■■□□□ 1.09
PCDHB2-202ENST00000622947 CHST3Q7LGC8 479 aa21.88■■□□□ 1.09
PCDHB2-202ENST00000622947 NKX2-3Q8TAU0 364 aa21.88■■□□□ 1.09
PCDHB2-202ENST00000622947 CTNNA3Q9UI47 895 aa21.88■■□□□ 1.09
PCDHB2-202ENST00000622947 MBD4O95243 580 aa21.88■■□□□ 1.09
PCDHB2-202ENST00000622947 ZNF384Q8TF68 577 aa21.88■■□□□ 1.09
PCDHB2-202ENST00000622947 LRP2BPQ9P2M1 347 aa21.88■■□□□ 1.09
PCDHB2-202ENST00000622947 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.88■■□□□ 1.09
PCDHB2-202ENST00000622947 IMMTQ16891 758 aaKnown RBP21.87■■□□□ 1.09
PCDHB2-202ENST00000622947 VPS37DQ86XT2 251 aa21.87■■□□□ 1.09
PCDHB2-202ENST00000622947 AIDAQ96BJ3 306 aa21.87■■□□□ 1.09
PCDHB2-202ENST00000622947 ARMT1Q9H993 441 aa21.87■■□□□ 1.09
PCDHB2-202ENST00000622947 GNL3LQ9NVN8 582 aaKnown RBP21.87■■□□□ 1.09
PCDHB2-202ENST00000622947 ABCF2Q9UG63 623 aa21.87■■□□□ 1.09
PCDHB2-202ENST00000622947 PRDM4Q9UKN5 801 aa21.87■■□□□ 1.09
PCDHB2-202ENST00000622947 DENND2AQ9ULE3 1009 aa21.87■■□□□ 1.09
PCDHB2-202ENST00000622947 ANKRD31Q8N7Z5 1873 aa21.87■■□□□ 1.09
PCDHB2-202ENST00000622947 ST5P78524 1137 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms