RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 DLGAP5Q15398 846 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 TMEM31Q5JXX7 168 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 AKNAD1Q5T1N1 836 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 NBPF12Q5TAG4 269 aaPredicted RBP3.17□□□□□ -1.9
CPNE3-211ENST00000621526 TTLL5Q6EMB2 1281 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.17□□□□□ -1.9
CPNE3-211ENST00000621526 ANKRD23Q86SG2 305 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 ERO1BQ86YB8 467 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 C7orf61Q8IZ16 206 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 ADAMTS19Q8TE59 1207 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 MYLIPQ8WY64 445 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 RTF1Q92541 710 aaKnown RBP3.17□□□□□ -1.9
CPNE3-211ENST00000621526 FAM161BQ96MY7 647 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 UHRF1Q96T88 793 aaPredicted RBP3.17□□□□□ -1.9
CPNE3-211ENST00000621526 LBHD1Q9BQE6 289 aaPredicted RBP3.17□□□□□ -1.9
CPNE3-211ENST00000621526 COA1Q9GZY4 146 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 ZBTB3Q9H5J0 574 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 C11orf49Q9H6J7 331 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 ANKIB1Q9P2G1 1089 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 OGDHLQ9ULD0 1010 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 BCORQ6W2J9 1755 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 PAPPA2Q9BXP8 1791 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 BDP1A6H8Y1 2624 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 ZNF804BA4D1E1 1349 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 MYPNQ86TC9 1320 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 ADGRA2Q96PE1 1338 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 SPDYE5A6NIY4 337 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 UFL1O94874 794 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 BCRP11274 1271 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 COL6A1P12109 1028 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 MYL6BP14649 208 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 SYN1P17600 705 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 FLT3LGP49771 235 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 MRE11P49959 708 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 FKBP1AP62942 108 aaKnown RBP3.16□□□□□ -1.9
CPNE3-211ENST00000621526 EIF4G2P78344 907 aaKnown RBP eCLIP3.16□□□□□ -1.9
CPNE3-211ENST00000621526 PRKCZQ05513 592 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 PPATQ06203 517 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 TNFAIP1Q13829 316 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 RASA3Q14644 834 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 PDIA6Q15084 440 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 AAK1Q2M2I8 961 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 AMER1Q5JTC6 1135 aaPredicted RBP3.16□□□□□ -1.9
CPNE3-211ENST00000621526 LRP10Q7Z4F1 713 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 TTYH1Q9H313 450 aaPredicted RBP3.16□□□□□ -1.9
CPNE3-211ENST00000621526 PANK3Q9H999 370 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 ELP3Q9H9T3 547 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 HMX1Q9NP08 348 aaPredicted RBP3.16□□□□□ -1.9
CPNE3-211ENST00000621526 FZD1Q9UP38 647 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 LEMD3Q9Y2U8 911 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 CSADQ9Y600 493 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 PRUNE2Q8WUY3 3088 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 XDHP47989 1333 aa3.16□□□□□ -1.9
CPNE3-211ENST00000621526 COL11A2P13942 1736 aaPredicted RBP3.16□□□□□ -1.9
CPNE3-211ENST00000621526 COL1A1P02452 1464 aaPredicted RBP3.16□□□□□ -1.9
CPNE3-211ENST00000621526 RBBP6Q7Z6E9 1792 aaKnown RBP3.15□□□□□ -1.9
CPNE3-211ENST00000621526 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.15□□□□□ -1.91
CPNE3-211ENST00000621526 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.15□□□□□ -1.91
CPNE3-211ENST00000621526 PI4K2BG5E9Z4 385 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 SMIM22K7EJ46 135 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 PDHXO00330 501 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 CXCL11O14625 94 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 IRF6O14896 467 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 RGS20O76081 388 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 INHAP05111 366 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 EIF4A1P60842 406 aaKnown RBP3.15□□□□□ -1.91
CPNE3-211ENST00000621526 MDM2Q00987 491 aaPredicted RBP3.15□□□□□ -1.91
CPNE3-211ENST00000621526 PPIL2Q13356 520 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 SHHQ15465 462 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 COPS6Q7L5N1 327 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 IL27Q8NEV9 243 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.15□□□□□ -1.91
CPNE3-211ENST00000621526 DIS3LQ8TF46 1054 aaKnown RBP3.15□□□□□ -1.91
CPNE3-211ENST00000621526 HOOK2Q96ED9 719 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 PHACTR3Q96KR7 559 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 PRMT6Q96LA8 375 aaPredicted RBP3.15□□□□□ -1.91
CPNE3-211ENST00000621526 MRIQ9BWK5 157 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.15□□□□□ -1.91
CPNE3-211ENST00000621526 TSPYL2Q9H2G4 693 aaPredicted RBP3.15□□□□□ -1.91
CPNE3-211ENST00000621526 EPHX3Q9H6B9 360 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 CXXC1Q9P0U4 656 aaPredicted RBP3.15□□□□□ -1.91
CPNE3-211ENST00000621526 THEGQ9P2T0 379 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 CPA4Q9UI42 421 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 GABRQQ9UN88 632 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 SLC45A1Q9Y2W3 748 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 KNSTRNQ9Y448 316 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 CACNA1SQ13698 1873 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 ARFGEF2Q9Y6D5 1785 aa3.15□□□□□ -1.91
CPNE3-211ENST00000621526 NCOR1O75376 2440 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 SPDYE2BA6NHP3 402 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 PRR33A8MZF0 331 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 IRS4O14654 1257 aaPredicted RBP3.14□□□□□ -1.91
CPNE3-211ENST00000621526 ST18O60284 1047 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 SASH1O94885 1247 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 SPDYE6P0CI01 402 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 XRCC5P13010 732 aaKnown RBP3.14□□□□□ -1.91
CPNE3-211ENST00000621526 TNNI2P48788 182 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 VGLL4Q14135 290 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 PDE3AQ14432 1141 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 GRIN2CQ14957 1233 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms