RNA–Protein interactions for RNA: ENST00000620292.4

CBWD1-229, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-229ENST00000620292 CD163Q86VB7 1156 aa6.65□□□□□ -1.34
CBWD1-229ENST00000620292 KLHL23Q8NBE8 558 aa6.65□□□□□ -1.34
CBWD1-229ENST00000620292 GLIS3Q8NEA6 775 aa6.65□□□□□ -1.34
CBWD1-229ENST00000620292 EPS8L3Q8TE67 593 aaKnown RBP6.65□□□□□ -1.34
CBWD1-229ENST00000620292 SOX17Q9H6I2 414 aaPredicted RBP6.65□□□□□ -1.34
CBWD1-229ENST00000620292 TRAK1Q9UPV9 953 aa6.65□□□□□ -1.34
CBWD1-229ENST00000620292 ZCCHC6Q5VYS8 1495 aaKnown RBP6.65□□□□□ -1.35
CBWD1-229ENST00000620292 A0A096LPE4 126 aa6.64□□□□□ -1.35
CBWD1-229ENST00000620292 A0A1W2PPZ6 126 aa6.64□□□□□ -1.35
CBWD1-229ENST00000620292 LINC01387J3KSC0 135 aa6.64□□□□□ -1.35
CBWD1-229ENST00000620292 FSCN2O14926 492 aa6.64□□□□□ -1.35
CBWD1-229ENST00000620292 APBA3O96018 575 aa6.64□□□□□ -1.35
CBWD1-229ENST00000620292 IGHA1P01876 353 aa6.64□□□□□ -1.35
CBWD1-229ENST00000620292 CHRNA4P43681 627 aa6.64□□□□□ -1.35
CBWD1-229ENST00000620292 MAPK8P45983 427 aa6.64□□□□□ -1.35
CBWD1-229ENST00000620292 GRIA4P48058 902 aa6.64□□□□□ -1.35
CBWD1-229ENST00000620292 NRG1Q02297 640 aaPredicted RBP6.64□□□□□ -1.35
CBWD1-229ENST00000620292 ADGRE1Q14246 886 aa6.64□□□□□ -1.35
CBWD1-229ENST00000620292 FAM117BQ6P1L5 589 aa6.64□□□□□ -1.35
CBWD1-229ENST00000620292 EHD4Q9H223 541 aa6.64□□□□□ -1.35
CBWD1-229ENST00000620292 ABCB6Q9NP58 842 aa6.64□□□□□ -1.35
CBWD1-229ENST00000620292 C1QTNF9BB2RNN3 333 aa6.63□□□□□ -1.35
CBWD1-229ENST00000620292 GIPC1O14908 333 aa6.63□□□□□ -1.35
CBWD1-229ENST00000620292 FGD1P98174 961 aa6.63□□□□□ -1.35
CBWD1-229ENST00000620292 ATP2B2Q01814 1243 aa6.63□□□□□ -1.35
CBWD1-229ENST00000620292 GRM2Q14416 872 aa6.63□□□□□ -1.35
CBWD1-229ENST00000620292 TMEM130Q8N3G9 435 aa6.63□□□□□ -1.35
CBWD1-229ENST00000620292 GALNT11Q8NCW6 608 aa6.63□□□□□ -1.35
CBWD1-229ENST00000620292 SEC31BQ9NQW1 1179 aa6.63□□□□□ -1.35
CBWD1-229ENST00000620292 NLRP2Q9NX02 1062 aa6.63□□□□□ -1.35
CBWD1-229ENST00000620292 TMEM238LA0A1B0GVL6 79 aa6.62□□□□□ -1.35
CBWD1-229ENST00000620292 METTL12A8MUP2 240 aa6.62□□□□□ -1.35
CBWD1-229ENST00000620292 SOX1O00570 391 aaPredicted RBP6.62□□□□□ -1.35
CBWD1-229ENST00000620292 EIF4EBP3O60516 100 aaPredicted RBP6.62□□□□□ -1.35
CBWD1-229ENST00000620292 GADD45BO75293 160 aaPredicted RBP6.62□□□□□ -1.35
CBWD1-229ENST00000620292 ESRRAP11474 423 aaPredicted RBP6.62□□□□□ -1.35
CBWD1-229ENST00000620292 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.62□□□□□ -1.35
CBWD1-229ENST00000620292 RPS26P11Q5JNZ5 115 aaPredicted RBP6.62□□□□□ -1.35
CBWD1-229ENST00000620292 PI16Q6UXB8 463 aa6.62□□□□□ -1.35
CBWD1-229ENST00000620292 ASAP3Q8TDY4 903 aa6.62□□□□□ -1.35
CBWD1-229ENST00000620292 FRMD6Q96NE9 622 aa6.62□□□□□ -1.35
CBWD1-229ENST00000620292 SRCIN1Q9C0H9 1055 aa6.62□□□□□ -1.35
CBWD1-229ENST00000620292 CLEC4MQ9H2X3 399 aaPredicted RBP6.62□□□□□ -1.35
CBWD1-229ENST00000620292 WWC3Q9ULE0 1092 aa6.62□□□□□ -1.35
CBWD1-229ENST00000620292 CUX2O14529 1486 aa6.61□□□□□ -1.35
CBWD1-229ENST00000620292 PRPF40AO75400 957 aaKnown RBP6.61□□□□□ -1.35
CBWD1-229ENST00000620292 PROCP04070 461 aa6.61□□□□□ -1.35
CBWD1-229ENST00000620292 LDHBP07195 334 aaKnown RBP6.61□□□□□ -1.35
CBWD1-229ENST00000620292 XRCC5P13010 732 aaKnown RBP6.61□□□□□ -1.35
CBWD1-229ENST00000620292 CD68P34810 354 aaPredicted RBP6.61□□□□□ -1.35
CBWD1-229ENST00000620292 IKBKEQ14164 716 aa6.61□□□□□ -1.35
CBWD1-229ENST00000620292 MBTPS1Q14703 1052 aa6.61□□□□□ -1.35
CBWD1-229ENST00000620292 SPRED3Q2MJR0 410 aa6.61□□□□□ -1.35
CBWD1-229ENST00000620292 FOXD4L6Q3SYB3 417 aaPredicted RBP6.61□□□□□ -1.35
CBWD1-229ENST00000620292 TXNDC11Q6PKC3 985 aa6.61□□□□□ -1.35
CBWD1-229ENST00000620292 SHISA2Q6UWI4 295 aa6.61□□□□□ -1.35
CBWD1-229ENST00000620292 FOXD4L3Q6VB84 417 aaPredicted RBP6.61□□□□□ -1.35
CBWD1-229ENST00000620292 FBXO33Q7Z6M2 555 aa6.61□□□□□ -1.35
CBWD1-229ENST00000620292 KLHDC7BQ96G42 594 aa6.61□□□□□ -1.35
CBWD1-229ENST00000620292 SETDB2Q96T68 719 aa6.61□□□□□ -1.35
CBWD1-229ENST00000620292 BCO2Q9BYV7 579 aa6.61□□□□□ -1.35
CBWD1-229ENST00000620292 MRPL18Q9H0U6 180 aaKnown RBP6.61□□□□□ -1.35
CBWD1-229ENST00000620292 ZNF576Q9H609 170 aa6.61□□□□□ -1.35
CBWD1-229ENST00000620292 ZFYVE1Q9HBF4 777 aa6.61□□□□□ -1.35
CBWD1-229ENST00000620292 ARL4DP49703 201 aa6.6□□□□□ -1.35
CBWD1-229ENST00000620292 PCDH1Q08174 1060 aa6.6□□□□□ -1.35
CBWD1-229ENST00000620292 C19orf57Q0VDD7 668 aa6.6□□□□□ -1.35
CBWD1-229ENST00000620292 EAPPQ56P03 285 aaPredicted RBP6.6□□□□□ -1.35
CBWD1-229ENST00000620292 ANKRD24Q8TF21 1146 aa6.6□□□□□ -1.35
CBWD1-229ENST00000620292 DCAF1Q9Y4B6 1507 aa6.6□□□□□ -1.35
CBWD1-229ENST00000620292 ADAM11O75078 769 aa6.59□□□□□ -1.35
CBWD1-229ENST00000620292 B3GALT4O96024 378 aa6.59□□□□□ -1.35
CBWD1-229ENST00000620292 ZNF423Q2M1K9 1284 aa6.59□□□□□ -1.35
CBWD1-229ENST00000620292 TMCO4Q5TGY1 634 aa6.59□□□□□ -1.35
CBWD1-229ENST00000620292 Q6ZS46 218 aa6.59□□□□□ -1.35
CBWD1-229ENST00000620292 KRTAP1-3Q8IUG1 177 aa6.59□□□□□ -1.35
CBWD1-229ENST00000620292 SPOCK3Q9BQ16 436 aa6.59□□□□□ -1.35
CBWD1-229ENST00000620292 CARD10Q9BWT7 1032 aa6.59□□□□□ -1.35
CBWD1-229ENST00000620292 PPP4R2Q9NY27 417 aa6.59□□□□□ -1.35
CBWD1-229ENST00000620292 KCNK4Q9NYG8 393 aa6.59□□□□□ -1.35
CBWD1-229ENST00000620292 SPG7Q9UQ90 795 aa6.59□□□□□ -1.35
CBWD1-229ENST00000620292 MSTNO14793 375 aa6.58□□□□□ -1.36
CBWD1-229ENST00000620292 CDC25BP30305 580 aa6.58□□□□□ -1.36
CBWD1-229ENST00000620292 GNA15P30679 374 aa6.58□□□□□ -1.36
CBWD1-229ENST00000620292 GATA4P43694 442 aa6.58□□□□□ -1.36
CBWD1-229ENST00000620292 TRIM26Q12899 539 aaPredicted RBP6.58□□□□□ -1.36
CBWD1-229ENST00000620292 HGSNATQ68CP4 663 aa6.58□□□□□ -1.36
CBWD1-229ENST00000620292 NXPE4Q6UWF7 544 aa6.58□□□□□ -1.36
CBWD1-229ENST00000620292 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.58□□□□□ -1.36
CBWD1-229ENST00000620292 TXNRD3Q86VQ6 643 aa6.58□□□□□ -1.36
CBWD1-229ENST00000620292 C3orf58Q8NDZ4 430 aa6.58□□□□□ -1.36
CBWD1-229ENST00000620292 FOXD4L4Q8WXT5 416 aaPredicted RBP6.58□□□□□ -1.36
CBWD1-229ENST00000620292 PSMG3-AS1Q96PY0 264 aa6.58□□□□□ -1.36
CBWD1-229ENST00000620292 SSBP4Q9BWG4 385 aaPredicted RBP6.58□□□□□ -1.36
CBWD1-229ENST00000620292 OSBPL7Q9BZF2 842 aa6.58□□□□□ -1.36
CBWD1-229ENST00000620292 NRSN2Q9GZP1 204 aa6.58□□□□□ -1.36
CBWD1-229ENST00000620292 F8W735 103 aaPredicted RBP6.57□□□□□ -1.36
CBWD1-229ENST00000620292 WFDC12Q8WWY7 111 aa6.57□□□□□ -1.36
CBWD1-229ENST00000620292 C12orf49Q9H741 205 aa6.57□□□□□ -1.36
CBWD1-229ENST00000620292 USP21Q9UK80 565 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms